Ggra7271.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7271.t1
Unique NameGgra7271.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length694
Homology
BLAST of Ggra7271.t1 vs. uniprot
Match: A0A2V3J197 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J197_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 1.270e-24
Identity = 199/736 (27.04%), Postives = 314/736 (42.66%), Query Frame = 0
Query:    1 MSDQPIRRVLFAGAPTSRGFQNTKTILKPKEELRSCNPVATPTSGTKKRRRVTSFESTPLKDICDASPVPLXXXXXXXXXXXA----KRINGADGRTAVEEMMKA-AGQVLNSHSMEEGEGGKQISTPVRRKSVTFAEPIQVGGDQQSLTGEGFNKAEQSERSGAAEESISNTMDSIPAMETDTIHRENVEKQNHVRPANLV-VHRSTAPKDLRETENRRVGFQHAVGASDSLNGRDMELERMLLLNKKKRHLERSPFACNEEIKSQRDSSSNDEKVRTKYITFTKDEQLPGSGAFDSQPLEEEAENHTPASRHGSRWKPNRAQSKLELKLSNSFGTQIRSNEAGQRAFKEESARSSVSTESDSSELESRQRSWKRSHRKPRLSEVLKLQKALETAFWTDSRMVRQQTQAIVISDDESAVTLRGNNSSAPKEEAKVSVKKECDSARLTEVSDTIVSRSVTKHDKGHGIVKPAKSASVLQRRTAGSPSIASRTRSRTTGATAEKVPLSFQDRLKPKKKSDK--------------------KPSRAPEE---------IKNETTSAVTQVGK--------HDEEM---VVRKPKISKRKRSVPKHI--------ALDVADGAENLSPSPPKRGRINSEESTAASPRTFAEQRVSL-NASEEE-----FDSDAERDREVSPENQ--GDPLRDLVKVKLSKKMWQSVEEGWAVHNDITSCTKPQVNSSVLGFYVESPFG 674
            M+D+ I+RVLF    T+    + +TIL PKEELR      TP+ GTK+RR + +  S PL+ ICD+SPVP XXXXXXXXXXX     K ++     T VE  MK+ AG++  +++   G+  ++ STP+++K VTF++ +        +  EG+ +  +  +S    ES +N+   +   +  +  R       H    N   + R  +P        R     H+   ++  +    + E     N    H +   F  ++   S+  S++  EK +           +  +GA    P++    N        + +      SK E       G + R  + G    + E      +                   ++PRLSEVL+LQK+LETAFWTDSR VR   + +VIS+D+     R   ++ P    K S  +  ++ R  +   T   RS  K  K   ++K   S +   R    +      TRSR+  A  E+ P+    R K ++ S +                    +PSR   E         + +E+  +V    +        + EEM   V+RK   +KRK S PK             + D  E  S     +G    + +T A     AE   S+ N S ++      DSDA   +E S  N+     L  +  VKLS K W + + GW +H +ITS T  Q++ S +  Y++SPFG
Sbjct:    1 MADKQIQRVLFPSPQTAGLKTSRRTILGPKEELRPLPQRPTPSPGTKRRRSIVALTSIPLRKICDSSPVPXXXXXXXXXXXXXXXSDKILDSVADPTGVETGMKSPAGRLREANTEGMGKSEERPSTPLQQKRVTFSDAV--------IIREGYPELPEQNQSKPCAESQTNS--GVECADESSPGRAEKGSDPHKMEENAATLARHASPVSPAHENERPTSAVHSY-LNEETDALRQDCEDSGFANDG--HGDSGRFQSHQGGYSRIPSTTEQEKEQDFAEITPTCSHVNDTGAIPELPIQPGDNNSGYREAESTDFMDK--TSKQESSEEGMDGAKSRLRKRGIEKRENEDCYHGTA----------------HVKKRPRLSEVLRLQKSLETAFWTDSRKVRNLREPVVISEDDEPPVSRETRTATPGR--KKSPMRRPNTERRLQTQPT---RSTQKKKKKSSVLKHTGSPNQAMRERNANDRTGPLTRSRSLNA--EQSPIFADARDKRQRASQRAAGNTLKRSVEAHGRNRKLTRPSRERNEAARHHGVSPVSSESRQSVLVTSEDVIMQGPVNQEEMRTVVIRKR--TKRKSSSPKQFRSTPCFEHVRQLPDEEEVKSAD---KGPTTLQLATIARTGHGAEVTNSMENCSPDKDKKSAVDSDARDAKERSDSNRVMETDLEVMDFVKLSAKEWANFQIGWDLHMEITS-TSTQIDLSKVFEYIQSPFG 692          
The following BLAST results are available for this feature:
BLAST of Ggra7271.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1971.270e-2427.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:594832..596913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7271.t1Ggra7271.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 594832..596913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7271.t1 ID=Ggra7271.t1|Name=Ggra7271.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=694bp
MSDQPIRRVLFAGAPTSRGFQNTKTILKPKEELRSCNPVATPTSGTKKRR
RVTSFESTPLKDICDASPVPLPIAAAAAAAAAAKRINGADGRTAVEEMMK
AAGQVLNSHSMEEGEGGKQISTPVRRKSVTFAEPIQVGGDQQSLTGEGFN
KAEQSERSGAAEESISNTMDSIPAMETDTIHRENVEKQNHVRPANLVVHR
STAPKDLRETENRRVGFQHAVGASDSLNGRDMELERMLLLNKKKRHLERS
PFACNEEIKSQRDSSSNDEKVRTKYITFTKDEQLPGSGAFDSQPLEEEAE
NHTPASRHGSRWKPNRAQSKLELKLSNSFGTQIRSNEAGQRAFKEESARS
SVSTESDSSELESRQRSWKRSHRKPRLSEVLKLQKALETAFWTDSRMVRQ
QTQAIVISDDESAVTLRGNNSSAPKEEAKVSVKKECDSARLTEVSDTIVS
RSVTKHDKGHGIVKPAKSASVLQRRTAGSPSIASRTRSRTTGATAEKVPL
SFQDRLKPKKKSDKKPSRAPEEIKNETTSAVTQVGKHDEEMVVRKPKISK
RKRSVPKHIALDVADGAENLSPSPPKRGRINSEESTAASPRTFAEQRVSL
NASEEEFDSDAERDREVSPENQGDPLRDLVKVKLSKKMWQSVEEGWAVHN
DITSCTKPQVNSSVLGFYVESPFGCADLVSAFDSDFGLEDKDS*
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