Ggra7268.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7268.t1
Unique NameGgra7268.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length249
Homology
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A2V3J267 (Putative membrane-associated 30 kDa protein, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J267_9FLOR)

HSP 1 Score: 319 bits (817), Expect = 2.090e-107
Identity = 185/248 (74.60%), Postives = 196/248 (79.03%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALESDSVDDELQKMKNQLSGTTPFQLKGSYDPEVEGELEKMKKNM 248
            MNLFDRFFRVVRANLNQ VSGMEDPEK+L  XXXXXXX                                            EEDLAREALVRKK+AD+QE SL +QIGGMKANVDKLYTSMQQLESKI EA++KKDQYVARARTAKTSQKVNDML NV+T+GGLEAFERMKAKVEELEVKADVSRELSLGG+ADVSLESKFKALESDSVDDELQKMKNQLSGT PF+LKGSYDPEVEGELE+MKKNM
Sbjct:    1 MNLFDRFFRVVRANLNQAVSGMEDPEKILNQXXXXXXXDLVKVRQAYAEVSATLKRIERQREQAATTGMEWKKRAQLALQKGEEDLAREALVRKKSADDQEASLTSQIGGMKANVDKLYTSMQQLESKIGEAKSKKDQYVARARTAKTSQKVNDMLSNVATTGGLEAFERMKAKVEELEVKADVSRELSLGGSADVSLESKFKALESDSVDDELQKMKNQLSGTAPFKLKGSYDPEVEGELERMKKNM 248          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A7S1XG52 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XG52_9RHOD)

HSP 1 Score: 224 bits (572), Expect = 1.500e-69
Identity = 144/247 (58.30%), Postives = 175/247 (70.85%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAA-DVSLESKFKALESDSVDDELQKMKNQLSGTTPFQLKGSYDPEVEGELEKMKK 246
            MNL DRFFRVVR+N+N ++S +EDPEK++                                   XXXXXXXXXXXXXX    +E LAREAL+RKK  +E  TSL AQ+G M+ NV KLY SMQQLE+KISEAR KKDQY+ARARTAKTSQKVNDMLGNVSTSG L+AFERMK KVE+LE +A+VSRE+S G    D SLES+F+ALE+ +VDDELQKMKNQ+ G +PF L  +  P ++ E+E+MK+
Sbjct:   50 MNLVDRFFRVVRSNINSLISSVEDPEKIISQTVTDMQADLVKVRQAYAEVNATTKRLEKQKQQAXXXXXXXXXXXXXXLTKGDEGLAREALLRKKQQEEISTSLGAQLGSMQENVAKLYNSMQQLEAKISEARLKKDQYIARARTAKTSQKVNDMLGNVSTSGALDAFERMKEKVEQLETQAEVSREISAGSTGTDPSLESRFRALETGTVDDELQKMKNQMKGQSPFVLPPN--PAIDAEIERMKR 294          
BLAST of Ggra7268.t1 vs. uniprot
Match: M1VMH1 (Vesicle-inducing protein in plastids 1VIPP1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMH1_CYAM1)

HSP 1 Score: 173 bits (439), Expect = 2.320e-49
Identity = 109/239 (45.61%), Postives = 143/239 (59.83%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALESDS-VDDELQKMKNQLSGTTPFQ-LKGSYDPEV 237
            MNLF RFFRV+RANLN +VS MEDPEKVL                                                      EDLAREAL+RKK  ++   +L  Q+     N  KLY+SMQQLE+KISEA+AKKD+Y+ RARTAKT+ KVN+ML +V TS  L AFERM+ KVE LE +A+VSR++   G+ D SLES+F+ALE+ + VD+EL +M+ +L G + ++ L+ S DPE+
Sbjct:   64 MNLFSRFFRVIRANLNALVSRMEDPEKVLTQSLEDVQKDLLRLRQAYAEVSASKKRLERQREAALKTAAEWQQRARLALEKGNEDLAREALLRKKQQEDMAKALENQLRMQAENTAKLYSSMQQLEAKISEAQAKKDEYITRARTAKTAIKVNEMLTSVDTSSALSAFERMQEKVETLESQAEVSRQMI--GSGDASLESQFRALEAGTDVDEELNRMRRELRGDSSYRALQASRDPEI 300          
BLAST of Ggra7268.t1 vs. uniprot
Match: M2XY81 (Phage shock protein A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY81_GALSU)

HSP 1 Score: 167 bits (423), Expect = 5.250e-48
Identity = 99/169 (58.58%), Postives = 123/169 (72.78%), Query Frame = 0
Query:   83 EEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALESDSVDDELQKMKNQLSGTT-----PFQLKGSYDPEVEGELEKMKK 246
            EE LAREALVRKK  +E   SL  Q+     N++KLY+SMQQLE KI+EARAKKDQY+ARARTAKTSQKVN+MLG+V+TS  LEAFERMK+KVEELE  A+ S    + G+ D +LE +F+ALE  SVDDEL ++K  L  ++     PFQ     DP VE EL++MK+
Sbjct:   62 EEGLAREALVRKKQQEEMAKSLEEQLALQTDNMNKLYSSMQQLEVKINEARAKKDQYIARARTAKTSQKVNEMLGSVNTSSALEAFERMKSKVEELEASAEASA--GMIGSGDANLERQFQALEGTSVDDELSQLKRSLESSSRPKSLPFQ-----DPNVEAELDRMKR 223          
BLAST of Ggra7268.t1 vs. uniprot
Match: W7TN53 (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA)

HSP 1 Score: 167 bits (422), Expect = 7.420e-47
Identity = 110/253 (43.48%), Postives = 144/253 (56.92%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKAL-ESDSVDDELQKMKNQLSG----TTPFQLKGSYDPEVEGELEKMKKNM 248
            MNL DRFFRVV+ANLN V+  +EDPEK+L                                                     +E+LAREAL R++   E  +SL  Q+      +D+L+ SMQQLE+KISEA++KKDQ +ARARTAKTS+KVNDML +VS +  ++AFERMK KVE LE KA+V+ +L+  G +D SLE KFK L ES +VDDEL KMK  +      +  F   G  + EV+ ELE ++K M
Sbjct:   58 MNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLA--GVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEM 308          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A8J2SJN9 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.370e-45
Identity = 113/252 (44.84%), Postives = 139/252 (55.16%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLG-GAADVSLESKFKALES-DSVDDELQKMKNQLSGTT--PFQLKGSYDPEVEGELEKMKKNM 248
            MN FDRF RV  AN+N V+  MEDPEKVL                                                     +++LAREAL RK+   +  TSL  QI     ++ KLY SM  LESKISEAR+ KDQY+ARARTAKT+ KVNDML +VS +  ++AFERMK KVE LE +A+VS +L  G G AD  +ES+FK LE+  SVDDEL KMK QL+  +  P +     DP VE EL K+K  M
Sbjct:   39 MNFFDRFKRVAEANINNVLGKMEDPEKVLNQAVEDLQKDLVTIRQSYAEVMATQKRQQRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQVDASTSLDEQIAIQSDSLSKLYDSMTALESKISEARSMKDQYIARARTAKTATKVNDMLSSVSGTTSMDAFERMKEKVEMLETQAEVSGQLQFGAGTAD--MESRFKELEAGSSVDDELSKMKRQLTAGSDEPAKPAAPADPAVEDELAKLKGEM 288          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A7S3K4X7 (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4X7_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.780e-45
Identity = 106/247 (42.91%), Postives = 140/247 (56.68%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALESDS-VDDELQKMKNQLSGTTPFQLKG-SYDPEVEGELEKMK 245
            MN+FDRF RV +AN+N V++  EDPEKVL                                                     +E+LAREAL RK+  D+Q +SL  QI     +++KLY SMQ LE+KI+EA++ KDQY+ARARTAKT+ KVNDML +V+ S  ++AFERMK KVE LE +A+V+ EL+ G A+ +  E+KF+ LE  S VDDEL +MK  L+       K    DP VE EL K+K
Sbjct:   50 MNIFDRFSRVAKANINNVLNKWEDPEKVLNQAVEDLQKDLVKIRQSYAEVMATQKRMQRQKDQAENLANEWYRRAQLALESDDEELAREALSRKQQQDDQISSLDDQIRLQSESLNKLYDSMQTLENKIAEAKSTKDQYIARARTAKTATKVNDMLSSVTGSTSMDAFERMKEKVEMLETEAEVAGELTQGTASSIDSETKFRQLEMGSKVDDELSRMKRALNAGNENAPKALPADPAVEDELSKLK 296          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A7S2RSU7 (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSU7_9STRA)

HSP 1 Score: 157 bits (396), Expect = 7.280e-43
Identity = 101/224 (45.09%), Postives = 134/224 (59.82%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALE-SDSVDDELQKMKNQLSG 223
            MNLF+RF RV +ANLNQV++ MEDPEK++                                                     EE+LAREAL RK+ A EQ  +L AQI    +++++LY SM QLESKI+EA++ ++ Y+ARARTAKT+  VNDML  +  S  +  F+RMK KVE LE +A+VS++L +G +AD+SLESKFKALE ++SVDDEL KMK  L G
Sbjct:   73 MNLFNRFGRVAKANLNQVLNKMEDPEKMMNQAVDDLNKDLVKVRQSYAEIMATQKRLEKQRDTAKANTEDWLQRAQMALEKGEEELAREALQRKQQASEQAEALDAQIETQTSSLNQLYDSMTQLESKIAEAKSTRETYIARARTAKTATTVNDMLSGIGDSS-ISTFDRMKEKVESLEAQAEVSQQL-MGTSADLSLESKFKALEGANSVDDELAKMKASLPG 294          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A651DU42 (PspA/IM30 family protein n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A651DU42_9CYAN)

HSP 1 Score: 149 bits (375), Expect = 1.490e-40
Identity = 98/248 (39.52%), Postives = 134/248 (54.03%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALESDSVDDELQKMKNQLSGTTPFQLKGS---YDPEVEGELEKMK 245
            M  F R  RV+RANLN +VS  EDPEK+L                                                     +E+LAREAL R+K+  E   SL  Q+   +A VD L  +M  LE KIS+A+ KKD Y+ARAR+AK SQ++N+MLG V T+G ++AF+RM+ +V ELE +++   EL   G  D  LES+F ALE  SVDD+L  MK +LSG +P  L  S   + PE++ ELE+++
Sbjct:    1 MGFFQRVGRVIRANLNSLVSQAEDPEKILEQAVSDMQNDLIEMRQGVAQAIATQKRTERQHSQAQSTADEWYRRAQLALQKGDEELAREALSRRKSYQETADSLGHQLPQQQAVVDNLRQNMMSLERKISDAKTKKDMYIARARSAKASQQLNEMLGRVGTTGAMQAFDRMEERVHELEARSEAVAEL---GQDD--LESRFSALEGSSVDDDLAAMKAELSGRSPQSLPSSPAAHTPEIDHELEELR 243          
BLAST of Ggra7268.t1 vs. uniprot
Match: A0A7J7IQC4 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQC4_9RHOD)

HSP 1 Score: 148 bits (374), Expect = 1.030e-39
Identity = 100/239 (41.84%), Postives = 128/239 (53.56%), Query Frame = 0
Query:    1 MNLFDRFFRVVRANLNQVVSGMEDPEKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDLAREALVRKKAADEQETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQKVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLESKFKALES-DSVDDELQKMKNQLSGTTPFQ-LKGSYDPEV 237
            MNL  RFFRV+RANLN +VS MEDPEKVL                                                      EDL                           N  KLY+SMQQLE+KI EA+AKKD+Y+ RARTAKT+ KVN+ML +V TS  L AFERM+ KVE LE +A+VSR+++  G+ D SLES+F+ALE+ D+VD+EL +M+ +L G  PF+ L+GS D E+
Sbjct:   62 MNLIARFFRVIRANLNALVSRMEDPEKVLTQSLEDVQKDLLRLRQAYAEVSASKKRLERQREAALKTAAEWQQRARLALEKGNEDLXXXXXXXXXXXXXXXXXXXXXXXXXXENTAKLYSSMQQLEAKIVEAQAKKDEYITRARTAKTAIKVNEMLTSVDTSSALTAFERMQEKVEMLESQAEVSRQMT--GSGDASLESQFRALEAGDNVDEELNRMRRELKGDIPFRALQGSRDSEI 298          
The following BLAST results are available for this feature:
BLAST of Ggra7268.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2672.090e-10774.60Putative membrane-associated 30 kDa protein, chlor... [more]
A0A7S1XG521.500e-6958.30Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M1VMH12.320e-4945.61Vesicle-inducing protein in plastids 1VIPP1 n=1 Ta... [more]
M2XY815.250e-4858.58Phage shock protein A n=1 Tax=Galdieria sulphurari... [more]
W7TN537.420e-4743.48Membrane-associated 30 kDa protein n=2 Tax=Monodop... [more]
A0A8J2SJN91.370e-4544.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K4X77.780e-4542.91Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2RSU77.280e-4345.09Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A651DU421.490e-4039.52PspA/IM30 family protein n=2 Tax=unclassified Lept... [more]
A0A7J7IQC41.030e-3941.84Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
NoneNo IPR availableCOILSCoilCoilcoord: 115..142
NoneNo IPR availableCOILSCoilCoilcoord: 40..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..248
NoneNo IPR availablePANTHERPTHR31088:SF6MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTICcoord: 1..246
IPR007157PspA/IM30PFAMPF04012PspA_IM30coord: 2..220
e-value: 1.8E-52
score: 178.1
IPR007157PspA/IM30PANTHERPTHR31088MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTICcoord: 1..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:589405..590151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7268.t1Ggra7268.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 589405..590151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7268.t1 ID=Ggra7268.t1|Name=Ggra7268.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=249bp
MNLFDRFFRVVRANLNQVVSGMEDPEKVLNQTVTDMQSDLVKVRQAYAEV
SATLKRIERQREQASTTGTEWKKRAQMALQKGEEDLAREALVRKKAADEQ
ETSLAAQIGGMKANVDKLYTSMQQLESKISEARAKKDQYVARARTAKTSQ
KVNDMLGNVSTSGGLEAFERMKAKVEELEVKADVSRELSLGGAADVSLES
KFKALESDSVDDELQKMKNQLSGTTPFQLKGSYDPEVEGELEKMKKNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007157PspA_IM30