Ggra7267.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7267.t1
Unique NameGgra7267.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length196
Homology
BLAST of Ggra7267.t1 vs. uniprot
Match: A0A2V3J137 (GOLD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J137_9FLOR)

HSP 1 Score: 268 bits (684), Expect = 5.240e-88
Identity = 129/197 (65.48%), Postives = 163/197 (82.74%), Query Frame = 0
Query:    1 MPVSVRITDMTGKVILVRQAVDHGVFTFQSPEKIPNVPQKNDWSLRDE--DTDDDAYFRAIPDGAGDNRIPYMFCFEHVFSLPFHHLQVHGHARERPIIFSIKTGTDTKNMEYYDKLAKEKHLTTSEESFHIVEDRVSDIVRLVDEMRERELRMDHMNKRTQQMVTVYAIITCISIAAGAAYSSYETFRHLHQDKRV 195
            MPVS+ + D+TGK IL RQA+DHGVFTF+SP++IP + QK+DWSLRD+   T DDAYFRAIP GAGD+RIPY FCFEH  S+ F    + G   +R IIFSI++GTD K +EYYDKLAKEKHLT++EE+F+IVEDRVS+IVRLVDEMRERELR+DH+N+RTQ++VT Y+IITCI +A GA Y+S+ TF+HL + K +
Sbjct:   57 MPVSLSVRDITGKSILDRQAIDHGVFTFRSPDEIPTIDQKSDWSLRDDYDGTGDDAYFRAIPGGAGDDRIPYYFCFEHSSSMRFPTFHISGRPHQRRIIFSIRSGTDAKTLEYYDKLAKEKHLTSTEEAFNIVEDRVSEIVRLVDEMRERELRLDHLNRRTQRVVTTYSIITCICVAIGAIYASFATFKHLARQKVI 253          
BLAST of Ggra7267.t1 vs. uniprot
Match: R7Q882 (GOLD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q882_CHOCR)

HSP 1 Score: 208 bits (530), Expect = 5.640e-64
Identity = 100/196 (51.02%), Postives = 145/196 (73.98%), Query Frame = 0
Query:    1 MPVSVRITDMTGKVILVRQAVDHGVFTFQSPEKIPNVPQKNDWSLRDED--TDDDAYF-RAIPDGAGDNRIPYMFCFEHVFSLPFHHLQVHGHARERPIIFSIKTGTDTKNMEYYDKLAKEKHLTTSEESFHIVEDRVSDIVRLVDEMRERELRMDHMNKRTQQMVTVYAIITCISIAAGAAYSSYETFRHLHQDK 193
            MP+S+RITD TG+++L + A+DHGVF+F++P  +P V +++ W L+D++   DDDAY+ +A PD  GD+R  Y FCFEHV +     + +   A +R +IF +K+G D + MEYYDKLAKEKHL+++EE F IVED+VSDIVRL+DEMR+RELRM H++ RT ++V  Y+ + C +IA GA  +S  TF+ LH++K
Sbjct:  111 MPISLRITDSTGRIVLHKDAIDHGVFSFRAPNSLPGVAERDSWELKDDEYGEDDDAYWNKAGPDAVGDDRTSYRFCFEHVAA----GISLRAQALKRRVIFEVKSGNDVRTMEYYDKLAKEKHLSSTEELFRIVEDKVSDIVRLIDEMRQRELRMAHLSSRTSRVVAWYSALACGAIATGAVITSVATFKTLHREK 302          
The following BLAST results are available for this feature:
BLAST of Ggra7267.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1375.240e-8865.48GOLD domain-containing protein n=1 Tax=Gracilariop... [more]
R7Q8825.640e-6451.02GOLD domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 4..187
e-value: 0.0094
score: 9.2
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 3..181
e-value: 3.1E-15
score: 56.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..195
NoneNo IPR availableTMHMMTMhelixcoord: 162..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:587842..588429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7267.t1Ggra7267.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 587842..588429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7267.t1 ID=Ggra7267.t1|Name=Ggra7267.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=196bp
MPVSVRITDMTGKVILVRQAVDHGVFTFQSPEKIPNVPQKNDWSLRDEDT
DDDAYFRAIPDGAGDNRIPYMFCFEHVFSLPFHHLQVHGHARERPIIFSI
KTGTDTKNMEYYDKLAKEKHLTTSEESFHIVEDRVSDIVRLVDEMREREL
RMDHMNKRTQQMVTVYAIITCISIAAGAAYSSYETFRHLHQDKRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom