Ggra7257.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7257.t1
Unique NameGgra7257.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Homology
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A2V3J170 (tRNA-specific adenosine deaminase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J170_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 6.370e-70
Identity = 108/182 (59.34%), Postives = 137/182 (75.27%), Query Frame = 0
Query:    1 MKLCFLSTTLVLLPRAVHHTTQTRRCIARSAIHASGFKPQSDEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLR 182
            M L FL    +   RA+    ++R  +  S  H +    + D +YM AAL QA +AF  NEVPIGAVL+D +G+I++E HN VE T DCT+HAEMVCIQ AM+QR  WRLN T+LYST+EPCAMC+SA+ LAR+RRVV+GA+DLRLGACGTW+D+  EKHPFH+ D+VVGGVL +QS+ALLR
Sbjct:    1 MNLSFLIPPPLFSARALLPRHRSRPALRAS--HNAHANVRPDAFYMHAALEQAHRAFIANEVPIGAVLVDASGNIIAEGHNAVERTTDCTQHAEMVCIQQAMSQRRAWRLNGTILYSTVEPCAMCISAITLARIRRVVFGARDLRLGACGTWVDLVNEKHPFHTLDEVVGGVLAEQSAALLR 180          
BLAST of Ggra7257.t1 vs. uniprot
Match: R7QFP1 (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QFP1_CHOCR)

HSP 1 Score: 176 bits (445), Expect = 1.360e-52
Identity = 82/137 (59.85%), Postives = 107/137 (78.10%), Query Frame = 0
Query:   46 MQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLR 182
            M+ AL QA++A+++ EVP+GAVL+  +G++LS AHN+VES  D T HAE++C++ A A    WRL+DT LYSTLEPC MCLSAL LARV  +VY AKDLRLGACGTW+ +  EKHPFH+F  V GGVLE +++ L+R
Sbjct:   21 MRYALAQARRAYSLGEVPVGAVLVCSSGAVLSAAHNLVESLHDPTAHAEILCVRRAAAAAGNWRLHDTTLYSTLEPCPMCLSALALARVGAIVYAAKDLRLGACGTWLPLHEEKHPFHTFRDVRGGVLEDEAAELMR 157          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A7S2TMM0 (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TMM0_9EUKA)

HSP 1 Score: 162 bits (410), Expect = 5.300e-46
Identity = 80/143 (55.94%), Postives = 101/143 (70.63%), Query Frame = 0
Query:   40 QSDEYYMQAALRQAKKAFAMNEVPIGAVLIDPA-GSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALL 181
            + D  YM+ AL  A+ A  + EVPIGAVL+D A G +++  HN VE+T D T HAEM+CI+ A  +R  WRL  T LY TLEPC MC+SAL LARV RVVYG  + RLGACGTW+D+    HPFH+F +V GGVL ++S+ LL
Sbjct:   49 ERDLVYMRRALELARDAAEIGEVPIGAVLVDDATGEVIASQHNCVETTKDATAHAEMLCIREASRERGNWRLGSTTLYCTLEPCPMCISALALARVDRVVYGETNDRLGACGTWMDLPSTCHPFHTFSRVDGGVLREESAKLL 191          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A2A4YHV8 (tRNA-specific adenosine deaminase n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A2A4YHV8_9BACT)

HSP 1 Score: 151 bits (382), Expect = 2.150e-43
Identity = 71/144 (49.31%), Postives = 106/144 (73.61%), Query Frame = 0
Query:   40 QSDEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLRD 183
            + D  YM+ AL+QAK A+  NEVP+G+VL+   G IL+++HN+VE   D T HAEM+CI+ A      WRL  T LY+TLEPC+MC  A++L+RV+RVV+ AKD+R GACG+W+D+++EKHP H  + +  G+ E ++S+L+++
Sbjct:    2 KDDSSYMKLALKQAKIAYKKNEVPVGSVLVCD-GIILAKSHNLVEVMKDATAHAEMLCIKKASQMLGSWRLLGTTLYTTLEPCSMCYGAIMLSRVKRVVFAAKDIRHGACGSWVDLSKEKHPTHVLE-INSGLYEDEASSLMKE 143          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A0H5DTX1 (tRNA-specific adenosine deaminase n=1 Tax=Estrella lausannensis TaxID=483423 RepID=A0A0H5DTX1_9BACT)

HSP 1 Score: 149 bits (376), Expect = 2.490e-42
Identity = 73/146 (50.00%), Postives = 102/146 (69.86%), Query Frame = 0
Query:   39 PQS-DEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLRD 183
            PQ+ DE +M  AL++A K F   EVP+GAV++   G +++ +HN VE   D T HAEM+CI  A A    WRL    LY+TLEPC+MC  ALLL+RV R+VYGA D+R GACG+W+D+  + HP HS + +V G+L+++S+ L+RD
Sbjct:   10 PQNADEIFMLEALKEAWKGFQKGEVPVGAVVVKN-GKVIARSHNQVEMLKDATAHAEMLCITVAEAHEENWRLKGATLYATLEPCSMCAGALLLSRVDRLVYGAPDIRHGACGSWVDLFEKPHPTHSIE-IVRGILQEESATLMRD 153          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A6M1YS74 (tRNA-specific adenosine deaminase n=1 Tax=Candidatus Anoxychlamydiales bacterium TaxID=2705072 RepID=A0A6M1YS74_9BACT)

HSP 1 Score: 147 bits (372), Expect = 6.180e-42
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 0
Query:   42 DEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLR 182
            D ++M  AL+QAKKAF ++EVP+G VL+     +++  HN VE   D T HAEM+C+    A    WRL DT+LY+TLEPC MC  A++ ARV++VVY AKDLR+GA G++ID+ ++KHP H  +    GVLE+ SS LLR
Sbjct:    4 DNFFMLEALKQAKKAFEIDEVPVGCVLVHE-NKVIARGHNQVEKLKDATAHAEMICLTSGSAHFNNWRLEDTILYTTLEPCIMCAGAIINARVKKVVYSAKDLRVGANGSFIDVFKKKHPIHEVE-FTSGVLEELSSDLLR 142          
BLAST of Ggra7257.t1 vs. uniprot
Match: M2X652 (tRNA-specific adenosine deaminase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X652_GALSU)

HSP 1 Score: 147 bits (372), Expect = 8.120e-42
Identity = 72/134 (53.73%), Postives = 95/134 (70.90%), Query Frame = 0
Query:   43 EYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQ 176
            EY+M+ AL  AK++F   EVPIGA+L+D  G ++++  N VE+T D T+HAE+ CIQ A      WRL +T LYSTLEPCAMCLSAL LARV  +VYGAKD RLGA  +W  + + KHP+H    + GG+LE++
Sbjct:   10 EYFMRIALELAKQSFYQGEVPIGAILVDAKGKVIAKGRNQVETTKDPTQHAELQCIQAATRVCGNWRLLNTTLYSTLEPCAMCLSALQLARVSFIVYGAKDFRLGAIESWYPLVQVKHPYHRITHM-GGILEEE 142          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A6M1ZIW6 (tRNA-specific adenosine deaminase n=1 Tax=Candidatus Anoxychlamydiales bacterium TaxID=2705072 RepID=A0A6M1ZIW6_9BACT)

HSP 1 Score: 146 bits (369), Expect = 1.750e-41
Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 0
Query:   42 DEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLRDXXXXXXXQSTRN 195
            D ++M  AL++AKKAF ++EVP+G VL+     +++  HN VE   D T HAEM+C+    A    WRL DT+LY+TLEPC MC  A++ ARV++VV+ AKDLR+GA G++ID+  +KHP H  + ++ GVLE+ SS LLR+       Q TRN
Sbjct:    4 DNFFMLEALKEAKKAFDIDEVPVGCVLVHN-NRVIARGHNQVEKLTDATAHAEMICLTSGSAHFNDWRLKDTILYTTLEPCIMCAGAIINARVKKVVWAAKDLRVGANGSFIDVFEKKHPIHEVE-IISGVLEEISSDLLREFF-----QKTRN 150          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A5J4YZP6 (tRNA-specific adenosine deaminase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZP6_PORPP)

HSP 1 Score: 148 bits (373), Expect = 2.800e-41
Identity = 91/209 (43.54%), Postives = 113/209 (54.07%), Query Frame = 0
Query:    1 MKLCFLSTTLVLLP------RAVHHTTQTRRCIARSAIHASG----FKPQSDEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRA-----------------GWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLR 182
            MK  FL   LV  P      R        RR    +    SG       Q+ + YMQ A+ +A  A+A  EVPIGAVL+   G I++  HN VES  D + HAE+VC++ A A+RA                  WRL    LY TLEPC+MCLSA LLAR+  +VYGA D+RLGA G+WID+ R KHPFH    V GGV   Q +AL+R
Sbjct:    1 MKPAFLVVNLVATPTRASVSRCSQEPVAARRTKPTTIFRHSGPPLPTGAQTHDAYMQEAIDEAHCAYAALEVPIGAVLVCEHGQIIARGHNQVESQCDVSAHAELVCLRRAPAERARICPACRENQSGTARPASWRLTGCTLYCTLEPCSMCLSAALLARLSGIVYGAPDVRLGAAGSWIDLLRVKHPFHDSITVQGGVRRTQCAALMR 209          
BLAST of Ggra7257.t1 vs. uniprot
Match: A0A6M1YIH9 (tRNA-specific adenosine deaminase n=3 Tax=Chlamydiae TaxID=204428 RepID=A0A6M1YIH9_9BACT)

HSP 1 Score: 144 bits (364), Expect = 9.700e-41
Identity = 71/142 (50.00%), Postives = 100/142 (70.42%), Query Frame = 0
Query:   42 DEYYMQAALRQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQHAMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACGTWIDITREKHPFHSFDQVVGGVLEQQSSALLRD 183
            D+++M  AL++AKKAF ++EVP+G VL+     I++ AHN VE   D T H EM+C+    A    WRL DT+LY+TLEPC MC  A++ ARV++VV+ AKDLR+GA G++ID+  +KHP H  + +  GVLE+ SS LLR+
Sbjct:    4 DKFFMLEALKEAKKAFDIDEVPVGCVLVH-GNRIIARAHNQVEKLTDATAHGEMICLTSGSAHFNDWRLKDTILYTTLEPCIMCSGAIINARVKKVVWAAKDLRVGANGSFIDVFEKKHPIHEVE-IESGVLEEISSNLLRE 143          
The following BLAST results are available for this feature:
BLAST of Ggra7257.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1706.370e-7059.34tRNA-specific adenosine deaminase n=1 Tax=Gracilar... [more]
R7QFP11.360e-5259.85CMP/dCMP-type deaminase domain-containing protein ... [more]
A0A7S2TMM05.300e-4655.94Hypothetical protein n=2 Tax=Lotharella oceanica T... [more]
A0A2A4YHV82.150e-4349.31tRNA-specific adenosine deaminase n=1 Tax=Candidat... [more]
A0A0H5DTX12.490e-4250.00tRNA-specific adenosine deaminase n=1 Tax=Estrella... [more]
A0A6M1YS746.180e-4251.06tRNA-specific adenosine deaminase n=1 Tax=Candidat... [more]
M2X6528.120e-4253.73tRNA-specific adenosine deaminase n=1 Tax=Galdieri... [more]
A0A6M1ZIW61.750e-4148.05tRNA-specific adenosine deaminase n=1 Tax=Candidat... [more]
A0A5J4YZP62.800e-4143.54tRNA-specific adenosine deaminase n=1 Tax=Porphyri... [more]
A0A6M1YIH99.700e-4150.00tRNA-specific adenosine deaminase n=3 Tax=Chlamydi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 31..199
e-value: 1.1E-50
score: 173.6
NoneNo IPR availablePIRSRPIRSR006769-3PIRSR006769-3coord: 42..191
e-value: 5.7E-13
score: 46.3
NoneNo IPR availablePIRSRPIRSR006769-1PIRSR006769-1coord: 42..191
e-value: 5.7E-13
score: 46.3
NoneNo IPR availablePANTHERPTHR11079:SF179TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTICcoord: 30..196
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 30..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableCDDcd01285nucleoside_deaminasecoord: 46..154
e-value: 1.25357E-46
score: 147.378
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 40..140
e-value: 3.6E-25
score: 87.8
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 40..151
score: 28.548239
IPR028883tRNA-specific adenosine deaminaseHAMAPMF_00972tRNA_aden_deaminasecoord: 46..189
score: 40.206024
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 33..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:485500..486105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7257.t1Ggra7257.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 485500..486105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7257.t1 ID=Ggra7257.t1|Name=Ggra7257.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
MKLCFLSTTLVLLPRAVHHTTQTRRCIARSAIHASGFKPQSDEYYMQAAL
RQAKKAFAMNEVPIGAVLIDPAGSILSEAHNVVESTGDCTKHAEMVCIQH
AMAQRAGWRLNDTVLYSTLEPCAMCLSALLLARVRRVVYGAKDLRLGACG
TWIDITREKHPFHSFDQVVGGVLEQQSSALLRDFFQQRRRQSTRNTSTGG
E*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR028883tRNA_aden_deaminase
IPR016193Cytidine_deaminase-like