Ggra7232.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7232.t1
Unique NameGgra7232.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length624
Homology
BLAST of Ggra7232.t1 vs. uniprot
Match: A0A2V3ILM4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILM4_9FLOR)

HSP 1 Score: 357 bits (917), Expect = 2.290e-111
Identity = 261/623 (41.89%), Postives = 350/623 (56.18%), Query Frame = 0
Query:    7 EPSSKESADDILSQPESQHGKHICNAVLKRPSGTLQSFLKQAVTELSGWGKATAASFLPEPMPLLEQSVDLQSSL--QHNLIEQAPVSITPLFLRVFDMHASKQTDNPFLKAHSVMSCALATGVQPGLPYKVELGLEEAPPKQKAQPFVSNATPRRTPRGPSINDTFSLGRKSLGPDLDRNANKPIVHRSSLQQLTRRRRSSVATRRMSRMKIDDEEALGVEEDNV------EEEDFERPEGLTDAQWEAQLKTRKKTKDIDKVRNRLNELKRRQERRDQEKHRPMEESNEE---NVVCANDTFYERNKRRQEIEEKRREQANEALRKKKDVQRNRLESKKRRIEKRLKLAKKKGQNDMSDDEVEEVDSEQEDNQNDQATHIHEETDQQTDSPGSKRQRLGTHDTDSHSNNDGPHQSQNNHDHSGGYVGRHQYGYASHSEVGGQRPLDHHM--YPVRRA---------------YQDASYPPHLSSDRQMLDDRGSYDRPPYPPGSNHARHGTRLPYYDSRPPHDF----PPDHPGREPSFHRNPEYHPSISPERNYENGGGMHNH-----RPATHPMNYLPPPNDVQFHRPMLP-PRGYHDRPPQHGPGVCRETTRIHLQHD 591
            +P  K    D++SQPESQHGK IC++ L  PS  +Q FLKQ VT +SGWGKATAASFL EP+PLL++SV+  SSL  Q+ +IE  P+S TPLFL  FDM AS + + P++KA      A ATGVQP LPY+V+L LEE PPKQKAQPFV+ ATPRR P+GPS+NDTF+LGR+++GPDL+R   +  V+R+S+    RRRRS+   RR+S+ K  +EE     ED +      +E   +RP GLTD QW+ Q +   + KDI+KV +R+NELK+ QE R +EKHRP+EES+E+   N+V A+DTFYER+KRRQE +EK+RE A EA +K+KD  R R E+KKRRIEK+L+  + +G++D S+++  +V  E   NQNDQATHI EE                                +                  SHSEV    PL +H   +P RRA               YQ+ SY  H    R    +R      P+P G+   +   R PY D++PP+ +    PP +P   P     P Y    +P   Y++  G+         P+  PM      ND  F  P    PR + D    H P + +     H  HD
Sbjct:    7 QPPPKNPVSDMISQPESQHGKQICDSALHLPSDCVQPFLKQVVTHVSGWGKATAASFLSEPVPLLDESVERLSSLHLQNKMIENDPLSATPLFLHSFDMRASTEAEEPYVKAKPATHSAFATGVQPTLPYRVQLELEEPPPKQKAQPFVTKATPRRVPKGPSLNDTFALGRRAIGPDLNRADQRVHVNRNSIPTPVRRRRSNPLHRRVSKPKTVEEE----NEDEIVGQPLSDESQLQRPPGLTDEQWKIQKEKLLRKKDINKVLSRINELKKVQETRVEEKHRPIEESSEDYLKNIVPADDTFYERSKRRQERDEKKRELATEASKKRKDTLRVRKENKKRRIEKKLRAVRGRGRDDESEEDDPQV--EXXXNQNDQATHIQEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQK-----------------PSHSEVQSMPPLSYHPQEHPRRRAMEDQYQDRRAYEGQGYQNGSYMSHQPQGRHTAYNREHSTLHPHPSGATPTQ-PFRHPY-DAQPPYPWGGAPPPSYPPXYPGXXXQPGY----APPHMYDSRSGLPPRIGFPPTPSHPPMXXXXXANDAPFRPPNTHRPRNFRD---SHSPTMTQGNP--HAYHD 595          
The following BLAST results are available for this feature:
BLAST of Ggra7232.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILM42.290e-11141.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..349
NoneNo IPR availableCOILSCoilCoilcoord: 252..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..334
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:343021..345168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7232.t1Ggra7232.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 343021..345168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7232.t1 ID=Ggra7232.t1|Name=Ggra7232.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=624bp
MSAAPLEPSSKESADDILSQPESQHGKHICNAVLKRPSGTLQSFLKQAVT
ELSGWGKATAASFLPEPMPLLEQSVDLQSSLQHNLIEQAPVSITPLFLRV
FDMHASKQTDNPFLKAHSVMSCALATGVQPGLPYKVELGLEEAPPKQKAQ
PFVSNATPRRTPRGPSINDTFSLGRKSLGPDLDRNANKPIVHRSSLQQLT
RRRRSSVATRRMSRMKIDDEEALGVEEDNVEEEDFERPEGLTDAQWEAQL
KTRKKTKDIDKVRNRLNELKRRQERRDQEKHRPMEESNEENVVCANDTFY
ERNKRRQEIEEKRREQANEALRKKKDVQRNRLESKKRRIEKRLKLAKKKG
QNDMSDDEVEEVDSEQEDNQNDQATHIHEETDQQTDSPGSKRQRLGTHDT
DSHSNNDGPHQSQNNHDHSGGYVGRHQYGYASHSEVGGQRPLDHHMYPVR
RAYQDASYPPHLSSDRQMLDDRGSYDRPPYPPGSNHARHGTRLPYYDSRP
PHDFPPDHPGREPSFHRNPEYHPSISPERNYENGGGMHNHRPATHPMNYL
PPPNDVQFHRPMLPPRGYHDRPPQHGPGVCRETTRIHLQHDILTPLSVRH
QNTIKKIHLIVDRFIALRDDIEV*
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