Ggra7212.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7212.t1
Unique NameGgra7212.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length263
Homology
[Close]
BLAST of Ggra7212.t1 vs. uniprot
Match: A0A2V3IHQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ8_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 6.930e-53
Identity = 107/244 (43.85%), Postives = 143/244 (58.61%), Query Frame = 0 
Query:   24 CSSKPPPSETEQVLYEEYTTPDGGKYRLDYDAHKNFKAEDWHKFEHAFQIDHTPTDEEIDEWVEANANSEDWEVVHIPANSSGPIDDGEPEALPRVDEFDEYEKPVRSMRELKRLEMFNDKKRDDKKNAQAMRALRLSR------EMEVAAVRALDADGGGTDDGLEICRATLSDNLRDLTIVIRSDLDGMERNYDEMGKKVKAEIAQSVRTKFIPKVWFKRAKEEDEKRMELERLFERIARER 261
            C++K P    E VLYE+Y TP GG YRL ++AH+ F   +W  FE  F +D TP+DEEID WVE  A        H+   SS P +    +   ++ E  E +                                          EME+AA+RALD DGGG +DG+EIC A LSDNLRDLTIV RS++  +E+ YDEMGK++K+EIA S+RT+FIP VWFK+A+EED++  +L+R+FE+IARER
Sbjct:   30 CTNKKPTEPEEHVLYEDYKTPSGGTYRLPFNAHERFTGAEWEGFEKTFGLDKTPSDEEIDAWVEKTAIDS-----HVVTLSSEPRNTWNNDVETKIGEPSEVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEMAALRALDGDGGGGEDGVEICDARLSDNLRDLTIVYRSNISEIEKQYDEMGKRIKSEIANSMRTRFIPNVWFKKAEEEDQRLEQLQRMFEQIARER 268
The following BLAST results are available for this feature:
BLAST of Ggra7212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHQ86.930e-5343.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:217620..218408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7212.t1Ggra7212.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 217620..218408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7212.t1 ID=Ggra7212.t1|Name=Ggra7212.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=263bp
MQTGSRLVRNLRQASRFSQDLRLCSSKPPPSETEQVLYEEYTTPDGGKYR
LDYDAHKNFKAEDWHKFEHAFQIDHTPTDEEIDEWVEANANSEDWEVVHI
PANSSGPIDDGEPEALPRVDEFDEYEKPVRSMRELKRLEMFNDKKRDDKK
NAQAMRALRLSREMEVAAVRALDADGGGTDDGLEICRATLSDNLRDLTIV
IRSDLDGMERNYDEMGKKVKAEIAQSVRTKFIPKVWFKRAKEEDEKRMEL
ERLFERIARERG*
back to top