Ggra7208.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7208.t2
Unique NameGgra7208.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A2V3ILV8 (Golgi SNAP receptor complex member 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILV8_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 6.380e-93
Identity = 154/241 (63.90%), Postives = 198/241 (82.16%), Query Frame = 0
Query:    4 QSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDDEGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 244
            QSWEV+RKEARRLETDIE+KL+EYSKLASSL +SRS+ALD R S +DEG+QRR T+ + + + EQ+T++M+ +L +LS T+  MR+LTQ   +G+  S+T+AHTLQRH EILRDYTQEF+KT++ IGT R+H EL+ GA  S   +  S  D++ LYAER+SIS AT+ AD ALA+G+SLKEDLDRQRAMFASMVERME+MSEGLP+++RLIGQIRRKRKRD+LI+A V ++L+  T  WK
Sbjct:    3 QSWEVLRKEARRLETDIESKLLEYSKLASSLQSSRSSALDTRPSNEDEGVQRRGTAGRDALIAEQLTADMEGLLKRLSSTVDAMRDLTQ---SGNVSSTTTAHTLQRHGEILRDYTQEFRKTRATIGTSREHAELLSGAKMSERPAGVS-ADMDRLYAERASISAATSGADTALATGMSLKEDLDRQRAMFASMVERMETMSEGLPAVNRLIGQIRRKRKRDVLIMAAVTSVLVFITVSWK 239          
BLAST of Ggra7208.t2 vs. uniprot
Match: R7Q8M3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8M3_CHOCR)

HSP 1 Score: 154 bits (388), Expect = 2.110e-43
Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 0
Query:  107 TLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASH--GD---LEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 244
            T+ RH EILRDY QEF+KT   +   RDH +LM GA  + +        GD   L+ LY ER+SI+ AT  AD A+A+G+SLKEDL+RQRAMFASMVERME+MSEGLP+++RLIGQIRRK+KRD+LI+A VV  +L  T  WK
Sbjct:   33 TMHRHAEILRDYNQEFRKTMDALVASRDHADLMAGAAAAAAEGGRVRVVGDSPGLDGLYKERASIAGATTGADSAIATGLSLKEDLERQRAMFASMVERMETMSEGLPAVNRLIGQIRRKKKRDVLIMAAVVGTMLFITFSWK 175          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A1X6NTL9 (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTL9_PORUM)

HSP 1 Score: 146 bits (369), Expect = 4.210e-39
Identity = 96/257 (37.35%), Postives = 150/257 (58.37%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSLHTSR-------STALDARTSTDDEGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRD--------HLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLS 246
            SW+ + K+ARRLE+DI+ KL  +++  +SL + R       +T +   T+T D G    +  +      E + +E++ +L++L+ ++  M  +       +     S H + RH +ILRDYT EF++TQ  +   R+          EL+  A  +PS           LYAER+S+++A   AD AL +G +L+EDL+RQR  FASMV RM+++ E +P I+RLIGQIRRK+KRD++++A VVA LL  T  WKL+
Sbjct:   51 SWDGLGKDARRLESDIDAKLALFARTTASLTSIRGPGLGGPATRISTATATGD-GAPNGSGGTDTYAAAEHVRTEVEELLSRLAASVDAMSRVQSAAGAAAAGGGASRHMVARHADILRDYTTEFRRTQRALVASREAADGLAGARAELLHDAAGAPSAGGGG------LYAERTSLASAGAGADAALNAGAALREDLERQRQTFASMVARMDAVGERVPGINRLIGQIRRKKKRDVMVMALVVATLLFLTGLWKLT 300          
BLAST of Ggra7208.t2 vs. uniprot
Match: M2X801 (Golgi SNAP receptor complex member 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X801_GALSU)

HSP 1 Score: 130 bits (326), Expect = 2.380e-34
Identity = 68/150 (45.33%), Postives = 107/150 (71.33%), Query Frame = 0
Query:   97 GSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASH--GDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 244
             S  S + +H L+RH EIL DY QEF+K+++ +    + ++L++ +  + SVS++ H     E L  ER+S+SN+   AD+A+  G++++EDL RQR +FASMV RME +SE LP ++RLIGQIRR+++RD+++L +VVAL +LFT  W+
Sbjct:    8 SSNTSLSQSHALERHQEILSDYIQEFRKSKATVRNWLEKMDLLENSHRN-SVSQSPHLSSQEEFLLKERNSVSNSERGADLAINQGLAVREDLARQRQIFASMVSRMEHVSERLPRLNRLIGQIRRRKRRDLIVLCSVVALFMLFTLLWR 156          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A6T9YWS2 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A6T9YWS2_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 5.980e-32
Identity = 91/268 (33.96%), Postives = 163/268 (60.82%), Query Frame = 0
Query:    4 QSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRST-------ALDARTS---TDDEGMQRRNTSSKH----SCLTEQMTSEMQHVLNQLSQTIQTM-RELTQQQQT-------GSKISSTSA-----HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 244
            +SW+ +RK+ARRLE+++++KLV +SKLA ++ +S ++       A  AR        EG+ +R   ++     S   E M+ E++ ++ +L + +  M R +T            G  +S + A     HTLQRH+EIL DY  +F++T++++ + R+  +L  G T +     ++ G  + L+ ER+++  A+   D A+  G++L+++L+RQR  FAS++ER+E  SE +P+++R+I QI+RK+KRD++I+A VVA+LL  T  +K
Sbjct:    8 ESWDSLRKDARRLESELDSKLVAFSKLAVAISSSSASGAPPPVGASKARADGGGASHEGLTQRRAGAEANGSASTGVEAMSMELEALIVRLGEVVDAMGRYVTPTNDVPSAGGGPGGAVSHSVAVPGASHTLQRHSEILNDYKGDFRRTKAVLASTRERNDLFAG-TRARVQGGSTAGGGDALFVERAALMGASAGVDSAVDKGLTLRDELERQRQNFASVMERVEVASEKMPALNRVIVQIKRKKKRDVIIMAAVVAVLLFITLFFK 274          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A7S0T4S5 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4S5_9RHOD)

HSP 1 Score: 123 bits (308), Expect = 9.420e-31
Identity = 83/208 (39.90%), Postives = 127/208 (61.06%), Query Frame = 0
Query:   52 GMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSA------HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSV-----SKASHGDL---EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 245
            G+ +R TS   +  +E M  E+  +L QL+  I  M  LT  +  G   +S S       HTLQRH EIL D+ ++F++T+  +   R+  EL  GA  + S      S A  GD      L AER+S+++A + AD ++  G+SL+++L +QRA FASM++RME+M + +P+++ LIGQI+R++KRD+LI A V+A L+  TA WKL
Sbjct:   27 GLDQRQTSRDLAISSEHMEVELDALLAQLADVIVAMGRLTGGEGAGGLNNSHSTPVSVMNHTLQRHEEILADHQRDFRRTRKTMMVAREQAELFSGAGANGSRGMDNNSGAMSGDRLQDASLQAERASLASAASMADSSVGQGLSLRDELFKQRAAFASMMDRMETMGQSVPALNALIGQIKRRKKRDVLIFAFVLAALVFCTAFWKL 234          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A5J4YX39 (Golgi SNAP receptor complex member 1-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX39_PORPP)

HSP 1 Score: 124 bits (310), Expect = 9.620e-31
Identity = 88/267 (32.96%), Postives = 149/267 (55.81%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSL-------------HTSRSTALDARTSTDDEGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSA--------HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELM-----QGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 245
            +WE +R+EARRLE +++ KLV Y+K                  H + S  ++       E +  R   +  S   E +  E++ +L+ LS  + +M++  +  QT    SS  +        H LQRH EIL DY  +F+KT+  I + R H EL      +  T +  ++K ++     LY ER+S++ +TN AD ++A G++L+++L RQRA F++M++R+++M   +P+I+ +I QI+RK+ RD++I A VV++L   T  WKL
Sbjct:    3 AWEQLRREARRLENEVDAKLVVYAKAGFGATHXXXXXXXXXXQHAAYSPNVNGARGRSGEELADREREA--SSAAEHVEKELESLLSHLSSIVSSMKDHVKAIQTPESRSSHQSGPPLSAMNHALQRHEEILADYKLDFQKTRRHIASIRQHSELFAAHKSRAETGADPLTKEANS----LYEERASLAASTNVADNSVAQGLTLRDELLRQRANFSAMMDRVQAMGSSVPAINTVINQIKRKKNRDVIIFAIVVSVLTFVTLVWKL 263          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A5J4YRG2 (Golgi SNAP receptor complex member 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRG2_PORPP)

HSP 1 Score: 118 bits (296), Expect = 1.760e-28
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0
Query:   67 EQMTSEMQHVLNQLSQTIQTMREL----TQQQQTGSKISS-----TSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDL-----------EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 245
            E M +E++ +L +LS  +  M  L    ++  + G+ +SS      S H  QRH+EIL D+  EF++T+S I   RD +EL+ G+  S + S      L           + L+AER+++  A+ +AD A+   ++L+++L+RQR+ FASM+ RME  S   P ++RLIGQ++RK++RDM +LA VV++L   T  WKL
Sbjct:   86 EAMVAEIEALLERLSDVVDRMGALASPVSKTGEKGANVSSGTPSNASIHAFQRHSEILSDFRTEFRRTKSTIKVARDRMELVSGSGISANGSAMGGAHLRASAAMNAAGPDALHAERAALVGASASADSAIEKSVTLRDELERQRSNFASMMSRMEEASGRFPVLNRLIGQLKRKKRRDMYVLAAVVSILAFLTVLWKL 284          
BLAST of Ggra7208.t2 vs. uniprot
Match: A0A197JZV6 (V-snare-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZV6_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 4.330e-27
Identity = 77/233 (33.05%), Postives = 134/233 (57.51%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDDEGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMR-ELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDL---EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVV 233
            SW+ +RKE R++ET+IE+KL   SKLA      R+ +  A       G+     +S +    E + + ++ +L +LS+T+  M   L  Q QT  +   +  H LQ+H +IL DYT+E++KT+  +   RDH +L+   +    +S   +G +   ++L  ERS I  + + AD AL    + ++DLDRQR+   S+ +R+ +++  LPS+ +LIG+I+ ++ RD +IL+ V+
Sbjct:   43 SWDTLRKEVRQIETEIESKLTALSKLAV-----RNGSASAPPQASAAGVPGAGAASANG---EDLEANIEELLEKLSRTVDAMSGHLDNQTQTNGQAPLSMTHLLQKHRDILHDYTKEYRKTRQNVRAARDHAQLL--TSVRDDISSFKNGGMSASDYLLNERSRIDGSHSLADSALEQAYATRDDLDRQRSTLLSVNQRINNVATQLPSVGQLIGKIQSRKNRDNVILSCVI 265          
BLAST of Ggra7208.t2 vs. uniprot
Match: D8UIU9 (Qb-SNARE, Gos1/GS28-family n=6 Tax=Chlamydomonadales TaxID=3042 RepID=D8UIU9_VOLCA)

HSP 1 Score: 111 bits (277), Expect = 5.840e-26
Identity = 74/241 (30.71%), Postives = 128/241 (53.11%), Query Frame = 0
Query:    6 WEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDDEGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLS 246
            WE +RKEARRLE +++ KL  ++KL SS   S         STD+  +     +   +   E +   +  V ++++ T+            G    S S HTL RH +IL+++TQEF+K  + +G   D ++L+ G+T +P +S         L  ER +I N+TN  D  L+   ++  +L +QR MF  + +++ ++    P ++ L+  IRRK+ +D L+L+ VVA  ++FT  + L+
Sbjct:   34 WEDLRKEARRLEGELDVKLAAFTKLCSSFEASYKL-----NSTDNAALGADQLAQTKAAEVEDLLQRLSDVNDEMAATV------------GGSTDSRS-HTLARHRDILQEFTQEFRKVNATLGAALDRVKLLAGSTETPLLSVQVQSSSGALLRERGTIQNSTNMVDDLLSQASNVSGNLMQQRRMFEGIADKLVTVGSRFPVVNGLLNAIRRKKSKDTLVLSGVVAACVIFTVIYVLA 256          
The following BLAST results are available for this feature:
BLAST of Ggra7208.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILV86.380e-9363.90Golgi SNAP receptor complex member 1 n=1 Tax=Graci... [more]
R7Q8M32.110e-4358.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NTL94.210e-3937.35Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
M2X8012.380e-3445.33Golgi SNAP receptor complex member 1 n=1 Tax=Galdi... [more]
A0A6T9YWS25.980e-3233.96Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0T4S59.420e-3139.90Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YX399.620e-3132.96Golgi SNAP receptor complex member 1-2 n=1 Tax=Por... [more]
A0A5J4YRG21.760e-2837.19Golgi SNAP receptor complex member 1 n=1 Tax=Porph... [more]
A0A197JZV64.330e-2733.05V-snare-domain-containing protein n=1 Tax=Linneman... [more]
D8UIU95.840e-2630.71Qb-SNARE, Gos1/GS28-family n=6 Tax=Chlamydomonadal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..93
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 158..222
e-value: 9.3E-7
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..107
NoneNo IPR availablePANTHERPTHR21094:SF0GOLGI SNAP RECEPTOR COMPLEX MEMBER 1coord: 3..243
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 247..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..246
NoneNo IPR availableTMHMMTMhelixcoord: 226..243
IPR023601Golgi SNAP receptor complex, subunit 1PANTHERPTHR21094GOS-28 SNARE- RELATEDcoord: 3..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:201455..202301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7208.t2Ggra7208.t2Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 201455..202301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7208.t2 ID=Ggra7208.t2|Name=Ggra7208.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MAQQSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDD
EGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKI
SSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSK
ASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVER
MESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023601Golgi_SNAP_su1