Ggra7208.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7208.t1
Unique NameGgra7208.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length246
Homology
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A2V3ILV8 (Golgi SNAP receptor complex member 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILV8_9FLOR)

HSP 1 Score: 273 bits (697), Expect = 2.610e-89
Identity = 152/241 (63.07%), Postives = 196/241 (81.33%), Query Frame = 0
Query:    4 QSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTD--GMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 242
            QSWEV+RKEARRLETDIE+KL+EYSKLASSL +SRS+ALD R S +  G+QRR T+ + + + EQ+T++M+ +L +LS T+  MR+LTQ   +G+  S+T+AHTLQRH EILRDYTQEF+KT++ IGT R+H EL+ GA  S   +  S  D++ LYAER+SIS AT+ AD ALA+G+SLKEDLDRQRAMFASMVERME+MSEGLP+++RLIGQIRRKRKRD+LI+A V ++L+  T  WK
Sbjct:    3 QSWEVLRKEARRLETDIESKLLEYSKLASSLQSSRSSALDTRPSNEDEGVQRRGTAGRDALIAEQLTADMEGLLKRLSSTVDAMRDLTQ---SGNVSSTTTAHTLQRHGEILRDYTQEFRKTRATIGTSREHAELLSGAKMSERPAGVS-ADMDRLYAERASISAATSGADTALATGMSLKEDLDRQRAMFASMVERMETMSEGLPAVNRLIGQIRRKRKRDVLIMAAVTSVLVFITVSWK 239          
BLAST of Ggra7208.t1 vs. uniprot
Match: R7Q8M3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8M3_CHOCR)

HSP 1 Score: 154 bits (388), Expect = 1.980e-43
Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 0
Query:  105 TLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASH--GD---LEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 242
            T+ RH EILRDY QEF+KT   +   RDH +LM GA  + +        GD   L+ LY ER+SI+ AT  AD A+A+G+SLKEDL+RQRAMFASMVERME+MSEGLP+++RLIGQIRRK+KRD+LI+A VV  +L  T  WK
Sbjct:   33 TMHRHAEILRDYNQEFRKTMDALVASRDHADLMAGAAAAAAEGGRVRVVGDSPGLDGLYKERASIAGATTGADSAIATGLSLKEDLERQRAMFASMVERMETMSEGLPAVNRLIGQIRRKKKRDVLIMAAVVGTMLFITFSWK 175          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A1X6NTL9 (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTL9_PORUM)

HSP 1 Score: 147 bits (370), Expect = 2.810e-39
Identity = 96/256 (37.50%), Postives = 150/256 (58.59%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSLHTSR-------STALDARTST-DGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRD--------HLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLS 244
            SW+ + K+ARRLE+DI+ KL  +++  +SL + R       +T +   T+T DG    +  +      E + +E++ +L++L+ ++  M  +       +     S H + RH +ILRDYT EF++TQ  +   R+          EL+  A  +PS           LYAER+S+++A   AD AL +G +L+EDL+RQR  FASMV RM+++ E +P I+RLIGQIRRK+KRD++++A VVA LL  T  WKL+
Sbjct:   51 SWDGLGKDARRLESDIDAKLALFARTTASLTSIRGPGLGGPATRISTATATGDGAPNGSGGTDTYAAAEHVRTEVEELLSRLAASVDAMSRVQSAAGAAAAGGGASRHMVARHADILRDYTTEFRRTQRALVASREAADGLAGARAELLHDAAGAPSAGGGG------LYAERTSLASAGAGADAALNAGAALREDLERQRQTFASMVARMDAVGERVPGINRLIGQIRRKKKRDVMVMALVVATLLFLTGLWKLT 300          
BLAST of Ggra7208.t1 vs. uniprot
Match: M2X801 (Golgi SNAP receptor complex member 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X801_GALSU)

HSP 1 Score: 130 bits (326), Expect = 2.240e-34
Identity = 68/150 (45.33%), Postives = 107/150 (71.33%), Query Frame = 0
Query:   95 GSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASH--GDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 242
             S  S + +H L+RH EIL DY QEF+K+++ +    + ++L++ +  + SVS++ H     E L  ER+S+SN+   AD+A+  G++++EDL RQR +FASMV RME +SE LP ++RLIGQIRR+++RD+++L +VVAL +LFT  W+
Sbjct:    8 SSNTSLSQSHALERHQEILSDYIQEFRKSKATVRNWLEKMDLLENSHRN-SVSQSPHLSSQEEFLLKERNSVSNSERGADLAINQGLAVREDLARQRQIFASMVSRMEHVSERLPRLNRLIGQIRRRKRRDLIVLCSVVALFMLFTLLWR 156          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A5J4YX39 (Golgi SNAP receptor complex member 1-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX39_PORPP)

HSP 1 Score: 127 bits (318), Expect = 5.980e-32
Identity = 87/265 (32.83%), Postives = 149/265 (56.23%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSL-------------HTSRSTALDARTSTDGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSA--------HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELM-----QGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 243
            +WE +R+EARRLE +++ KLV Y+K                  H + S  ++      G +  +   + S   E +  E++ +L+ LS  + +M++  +  QT    SS  +        H LQRH EIL DY  +F+KT+  I + R H EL      +  T +  ++K ++     LY ER+S++ +TN AD ++A G++L+++L RQRA F++M++R+++M   +P+I+ +I QI+RK+ RD++I A VV++L   T  WKL
Sbjct:    3 AWEQLRREARRLENEVDAKLVVYAKAGFGATHXXXXXXXXXXQHAAYSPNVNGARGRSGEELADREREASSAAEHVEKELESLLSHLSSIVSSMKDHVKAIQTPESRSSHQSGPPLSAMNHALQRHEEILADYKLDFQKTRRHIASIRQHSELFAAHKSRAETGADPLTKEANS----LYEERASLAASTNVADNSVAQGLTLRDELLRQRANFSAMMDRVQAMGSSVPAINTVINQIKRKKNRDVIIFAIVVSVLTFVTLVWKL 263          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A6T9YWS2 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A6T9YWS2_9RHOD)

HSP 1 Score: 126 bits (317), Expect = 1.110e-31
Identity = 91/268 (33.96%), Postives = 164/268 (61.19%), Query Frame = 0
Query:    4 QSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRST-------ALDART-----STDGMQRRNTSSKH----SCLTEQMTSEMQHVLNQLSQTIQTM-RELTQQQQT-------GSKISSTSA-----HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWK 242
            +SW+ +RK+ARRLE+++++KLV +SKLA ++ +S ++       A  AR      S +G+ +R   ++     S   E M+ E++ ++ +L + +  M R +T            G  +S + A     HTLQRH+EIL DY  +F++T++++ + R+  +L  G T +     ++ G  + L+ ER+++  A+   D A+  G++L+++L+RQR  FAS++ER+E  SE +P+++R+I QI+RK+KRD++I+A VVA+LL  T  +K
Sbjct:    8 ESWDSLRKDARRLESELDSKLVAFSKLAVAISSSSASGAPPPVGASKARADGGGASHEGLTQRRAGAEANGSASTGVEAMSMELEALIVRLGEVVDAMGRYVTPTNDVPSAGGGPGGAVSHSVAVPGASHTLQRHSEILNDYKGDFRRTKAVLASTRERNDLFAG-TRARVQGGSTAGGGDALFVERAALMGASAGVDSAVDKGLTLRDELERQRQNFASVMERVEVASEKMPALNRVIVQIKRKKKRDVIIMAAVVAVLLFITLFFK 274          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A7S0T4S5 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4S5_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 6.330e-31
Identity = 84/211 (39.81%), Postives = 129/211 (61.14%), Query Frame = 0
Query:   47 STDGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSA------HTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSV-----SKASHGDL---EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 243
            S+ G+ +R TS   +  +E M  E+  +L QL+  I  M  LT  +  G   +S S       HTLQRH EIL D+ ++F++T+  +   R+  EL  GA  + S      S A  GD      L AER+S+++A + AD ++  G+SL+++L +QRA FASM++RME+M + +P+++ LIGQI+R++KRD+LI A V+A L+  TA WKL
Sbjct:   24 SSGGLDQRQTSRDLAISSEHMEVELDALLAQLADVIVAMGRLTGGEGAGGLNNSHSTPVSVMNHTLQRHEEILADHQRDFRRTRKTMMVAREQAELFSGAGANGSRGMDNNSGAMSGDRLQDASLQAERASLASAASMADSSVGQGLSLRDELFKQRAAFASMMDRMETMGQSVPALNALIGQIKRRKKRDVLIFAFVLAALVFCTAFWKL 234          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A5J4YRG2 (Golgi SNAP receptor complex member 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRG2_PORPP)

HSP 1 Score: 118 bits (296), Expect = 1.670e-28
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0
Query:   65 EQMTSEMQHVLNQLSQTIQTMREL----TQQQQTGSKISS-----TSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDL-----------EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKL 243
            E M +E++ +L +LS  +  M  L    ++  + G+ +SS      S H  QRH+EIL D+  EF++T+S I   RD +EL+ G+  S + S      L           + L+AER+++  A+ +AD A+   ++L+++L+RQR+ FASM+ RME  S   P ++RLIGQ++RK++RDM +LA VV++L   T  WKL
Sbjct:   86 EAMVAEIEALLERLSDVVDRMGALASPVSKTGEKGANVSSGTPSNASIHAFQRHSEILSDFRTEFRRTKSTIKVARDRMELVSGSGISANGSAMGGAHLRASAAMNAAGPDALHAERAALVGASASADSAIEKSVTLRDELERQRSNFASMMSRMEEASGRFPVLNRLIGQLKRKKRRDMYVLAAVVSILAFLTVLWKL 284          
BLAST of Ggra7208.t1 vs. uniprot
Match: A0A197JZV6 (V-snare-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZV6_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 2.090e-27
Identity = 77/231 (33.33%), Postives = 135/231 (58.44%), Query Frame = 0
Query:    5 SWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMR-ELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDL---EHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVV 231
            SW+ +RKE R++ET+IE+KL   SKLA     + S +   + S  G+     +S +    E + + ++ +L +LS+T+  M   L  Q QT  +   +  H LQ+H +IL DYT+E++KT+  +   RDH +L+   +    +S   +G +   ++L  ERS I  + + AD AL    + ++DLDRQR+   S+ +R+ +++  LPS+ +LIG+I+ ++ RD +IL+ V+
Sbjct:   43 SWDTLRKEVRQIETEIESKLTALSKLAVR---NGSASAPPQASAAGVPGAGAASANG---EDLEANIEELLEKLSRTVDAMSGHLDNQTQTNGQAPLSMTHLLQKHRDILHDYTKEYRKTRQNVRAARDHAQLL--TSVRDDISSFKNGGMSASDYLLNERSRIDGSHSLADSALEQAYATRDDLDRQRSTLLSVNQRINNVATQLPSVGQLIGKIQSRKNRDNVILSCVI 265          
BLAST of Ggra7208.t1 vs. uniprot
Match: D8UIU9 (Qb-SNARE, Gos1/GS28-family n=6 Tax=Chlamydomonadales TaxID=3042 RepID=D8UIU9_VOLCA)

HSP 1 Score: 110 bits (276), Expect = 7.760e-26
Identity = 78/239 (32.64%), Postives = 128/239 (53.56%), Query Frame = 0
Query:    6 WEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDGMQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISSTSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKASHGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERMESMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLS 244
            WE +RKEARRLE +++ KL  ++KL SS   S         STD     N +     L +   +E++ +L +LS     M         G    S S HTL RH +IL+++TQEF+K  + +G   D ++L+ G+T +P +S         L  ER +I N+TN  D  L+   ++  +L +QR MF  + +++ ++    P ++ L+  IRRK+ +D L+L+ VVA  ++FT  + L+
Sbjct:   34 WEDLRKEARRLEGELDVKLAAFTKLCSSFEASYKL-----NSTD-----NAALGADQLAQTKAAEVEDLLQRLSDVNDEMAATV-----GGSTDSRS-HTLARHRDILQEFTQEFRKVNATLGAALDRVKLLAGSTETPLLSVQVQSSSGALLRERGTIQNSTNMVDDLLSQASNVSGNLMQQRRMFEGIADKLVTVGSRFPVVNGLLNAIRRKKSKDTLVLSGVVAACVIFTVIYVLA 256          
The following BLAST results are available for this feature:
BLAST of Ggra7208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILV82.610e-8963.07Golgi SNAP receptor complex member 1 n=1 Tax=Graci... [more]
R7Q8M31.980e-4358.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NTL92.810e-3937.50Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
M2X8012.240e-3445.33Golgi SNAP receptor complex member 1 n=1 Tax=Galdi... [more]
A0A5J4YX395.980e-3232.83Golgi SNAP receptor complex member 1-2 n=1 Tax=Por... [more]
A0A6T9YWS21.110e-3133.96Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0T4S56.330e-3139.81Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YRG21.670e-2837.19Golgi SNAP receptor complex member 1 n=1 Tax=Porph... [more]
A0A197JZV62.090e-2733.33V-snare-domain-containing protein n=1 Tax=Linneman... [more]
D8UIU97.760e-2632.64Qb-SNARE, Gos1/GS28-family n=6 Tax=Chlamydomonadal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 156..220
e-value: 9.2E-7
score: 29.1
NoneNo IPR availablePANTHERPTHR21094:SF0GOLGI SNAP RECEPTOR COMPLEX MEMBER 1coord: 3..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 245..245
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..244
NoneNo IPR availableTMHMMTMhelixcoord: 224..241
IPR023601Golgi SNAP receptor complex, subunit 1PANTHERPTHR21094GOS-28 SNARE- RELATEDcoord: 3..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:201455..202301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7208.t1Ggra7208.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 201455..202301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7208.t1 ID=Ggra7208.t1|Name=Ggra7208.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=246bp
MAQQSWEVVRKEARRLETDIETKLVEYSKLASSLHTSRSTALDARTSTDG
MQRRNTSSKHSCLTEQMTSEMQHVLNQLSQTIQTMRELTQQQQTGSKISS
TSAHTLQRHTEILRDYTQEFKKTQSMIGTQRDHLELMQGATTSPSVSKAS
HGDLEHLYAERSSISNATNNADIALASGISLKEDLDRQRAMFASMVERME
SMSEGLPSIHRLIGQIRRKRKRDMLILATVVALLLLFTACWKLSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023601Golgi_SNAP_su1