Ggra7205.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7205.t1
Unique NameGgra7205.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Homology
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BLAST of Ggra7205.t1 vs. uniprot
Match: A0A2V3ILY0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY0_9FLOR)

HSP 1 Score: 56.2 bits (134), Expect = 7.930e-6
Identity = 66/236 (27.97%), Postives = 97/236 (41.10%), Query Frame = 0 
Query:    7 SKPLAKQDQDEHNPGPSLRHDEDSLYTPTENSDRDEIEKDDFLTIEYDVDAWDDTALIDAYDRAVKSHGSNRSGKANATDKGRSETTARGIPHKSRKEAPTSGI--LVSPV-------EPSRKRKLS------NPLLPQPTAPH------------VRVSKKMKRDIHREQEQCPPAEPDETHPDITAPDDNXXXXXXXXXXXVLQGQPLSQELEQMLKSWYEAGYRAGLYVGKQS 215
            S+P  +Q+Q E      L  D      P EN + D  +  +F+ IEYDVDAWDDT L+ AY+RA++  G+    K N               H+S       G+    +P+       E   +R LS        +LP+    H            +R +K+++  +   +       P    P   +P              +L  Q LS ELE++L SWY AGYRAGL    Q+
Sbjct:  109 SEPSPEQEQHEEQ---VLESDGIGSSQPEEN-ESDGTDDGNFVPIEYDVDAWDDTELVAAYERAMEMGGNTNRAKKNRXXXXXXXXXXXXHEHQSLDNDVHRGLQPFTTPLAREQGGTECGAERTLSCVPVPSEIMLPKLVPTHDWMTAIPEDVEPIRAAKRVRFSMDYGETPASEVVP-MREPSTASPTHVSDSMIPPPPPAILARQRLSPELEELLNSWYIAGYRAGLAASTQT 339
The following BLAST results are available for this feature:
BLAST of Ggra7205.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILY07.930e-627.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010304Survival motor neuronPFAMPF06003SMNcoord: 117..216
e-value: 8.1E-5
score: 22.0
coord: 54..96
e-value: 4.0E-5
score: 23.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:196245..196998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7205.t1Ggra7205.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 196245..196998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7205.t1 ID=Ggra7205.t1|Name=Ggra7205.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MPRRTESKPLAKQDQDEHNPGPSLRHDEDSLYTPTENSDRDEIEKDDFLT
IEYDVDAWDDTALIDAYDRAVKSHGSNRSGKANATDKGRSETTARGIPHK
SRKEAPTSGILVSPVEPSRKRKLSNPLLPQPTAPHVRVSKKMKRDIHREQ
EQCPPAEPDETHPDITAPDDNRRMMIPPPPPPVLQGQPLSQELEQMLKSW
YEAGYRAGLYVGKQSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010304Survival_motor_neuron