Ggra7204.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7204.t1
Unique NameGgra7204.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length866
Homology
BLAST of Ggra7204.t1 vs. uniprot
Match: R7Q5A1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5A1_CHOCR)

HSP 1 Score: 220 bits (561), Expect = 1.020e-56
Identity = 201/738 (27.24%), Postives = 342/738 (46.34%), Query Frame = 0
Query:    1 MSVFTAGASDTNAKLVRSLAHSLKTNSANCK-----PLLDYCRSQNAFSAISADDAALFFDTVTAVLTSAHEQTASLSLQVLYHALSSIPPYLLRPHWLLAAQKLTSLLKSSKSSENPRLQAKLLTVMASAVSSAAPFPLLEPEMKAVVSKVCQSALFHALRALQPTQVTDYMCKAALCLIFAVLSTAPREVRTILSQLETGIRERFLFHRSSSVRNTAALLSAHLLACHAGKARIKVFEQRLNEACKQLHDIINMVDVFGPSDGEKRSGTFD-----ETLQKLSVSELQLRVSMTCSYIRHVVE--LRQDVLMPM--PLAALYRVLLRGIEERHVDAYAARSDTNLLDTDSVFLLINTVTSECAETLVRVTEACGKDATIVFTHQIGQCLETKLSHVVLRSRTEAGVDSNICERALIYRMVGGMIEVMGCGLLEYVSGMLEELFSAEVKLHVACRGSHALLVEEKHDVTEGNNRSRKRKRYQNDEGRQKSMPKSKCAVSKATPLNPLDKYCAQSAYTSKQSLQEAL----RCVTGVFELRGYISKQVSEHLRRIEHGIMKMMKEGAVFEEVLHAASAAGLSGGCNRMYAEASDLLVAASRMCGGASTGFGDV-RVQREARRSRSGFESIIHARGPAFCAGKRSCDQTSEEKLVVSSTGL-----EITDAMELRDDGGGGNDVGIARCSRDNGGEIKAVVMNNDASGTEGTHGVIGDGKNSKLGEDVDMTDGTDQAAG 714
            MS    G    NAK VR L+ +LK+ + + +      +L +  +  A + +S++DA   F  V A L + +  + + SL+V        PP L+  HW     ++ S+LKS++   N  L A+ L  +AS +++ AP  L     K  ++  C SA+ H  R L+    +  +  A++ L+FA+L+TAPRE+R +L +LE  +  +++ H   SVR  +A L AHLL C   K + KVF++R+   C +L +I+++VD F  +   +R+ T         L++ + S    R+S   S    +++  L    L P+   +  L   L RG   R +D Y    +   L+ D V  LI     E   TLV +TE+  + A + + H + Q    +LS+++L+ +T  G  + I +R+L++  +  ++ V+GCG +E +     +LF  ++ ++     + + L+ +       + R RKR++  N   R+ +  K   AV   +     DK    ++ T +  LQ  L    R +T + E RG +  +  + LRRIE  + ++ +      E L    A  L GG +R+ AEAS  L+    +    +       +++    R RS  E ++H RGP     K      S+ +  V  TG      E     +L DD   G D   A         +K    +  +S  EG+   I  G N K  E+    D  D+ AG
Sbjct:    1 MSALDLGTPAANAKQVRELSQALKSLNDSSRLYCFNAVLAHTGASRALATLSSEDADQLFSAVQAGLVNPNPYSRNASLRVAVLLSKHAPPSLVADHWASLTSRVISILKSARGV-NRSLTAQALAAVASLITAGAPLTLEGGNQKVSITTACHSAVVHVTRFLEGDPPSGDVALASIALLFAILNTAPRELRQVLPRLELALWGKWVGHPLESVRQASAKLLAHLLICCPEKVKQKVFDERIESGCTKLDEILSIVDHFTSARQSRRAVTPSMLLAVADLKEQAASGFADRLSHLYSAASFMLQEVLNHGSLTPLFISIPKLLHTLCRGFSHRQIDLYTPDLEGVALNADDVLRLIAITERESLRTLVTLTESVDRSAMLPYVHVLAQAFHRQLSYMILKVQTAPGAVAAIVQRSLLFDAMARIVMVLGCGFIEQILEPFVKLFECDIAIYSKAAHAQSYLLSKSSSAISESARFRKRRKVANSRNRE-AHAKEMSAVDSTS-----DKSVTWASATIRD-LQTVLISGTRLLTAIVENRGLLESRAVDALRRIEILMERIERFSTSSTEFLELIRAMALGGGPSRLSAEASPFLLRCLSLSKQTTLSMASSPQLRSSGLRMRSTAELLLHPRGPPVVRAKVPRRNASDHQSPV--TGFLPQQQENPTPHQLDDDEPQGTDKSDAEM-------LKPRKEDGLSSAFEGSRNEIPGGDNGKRLENFPGRDEKDRGAG 721          
The following BLAST results are available for this feature:
BLAST of Ggra7204.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q5A11.020e-5627.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..865
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 809..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 724..764
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..482
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 9..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:192999..195596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7204.t1Ggra7204.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 192999..195596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7204.t1 ID=Ggra7204.t1|Name=Ggra7204.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=866bp
MSVFTAGASDTNAKLVRSLAHSLKTNSANCKPLLDYCRSQNAFSAISADD
AALFFDTVTAVLTSAHEQTASLSLQVLYHALSSIPPYLLRPHWLLAAQKL
TSLLKSSKSSENPRLQAKLLTVMASAVSSAAPFPLLEPEMKAVVSKVCQS
ALFHALRALQPTQVTDYMCKAALCLIFAVLSTAPREVRTILSQLETGIRE
RFLFHRSSSVRNTAALLSAHLLACHAGKARIKVFEQRLNEACKQLHDIIN
MVDVFGPSDGEKRSGTFDETLQKLSVSELQLRVSMTCSYIRHVVELRQDV
LMPMPLAALYRVLLRGIEERHVDAYAARSDTNLLDTDSVFLLINTVTSEC
AETLVRVTEACGKDATIVFTHQIGQCLETKLSHVVLRSRTEAGVDSNICE
RALIYRMVGGMIEVMGCGLLEYVSGMLEELFSAEVKLHVACRGSHALLVE
EKHDVTEGNNRSRKRKRYQNDEGRQKSMPKSKCAVSKATPLNPLDKYCAQ
SAYTSKQSLQEALRCVTGVFELRGYISKQVSEHLRRIEHGIMKMMKEGAV
FEEVLHAASAAGLSGGCNRMYAEASDLLVAASRMCGGASTGFGDVRVQRE
ARRSRSGFESIIHARGPAFCAGKRSCDQTSEEKLVVSSTGLEITDAMELR
DDGGGGNDVGIARCSRDNGGEIKAVVMNNDASGTEGTHGVIGDGKNSKLG
EDVDMTDGTDQAAGGMDGTAALSAENRRKGEESAHGHEGDSRESDKAGDT
QDNHEGEHIRDSVTTRVNCDSVEAKRVENNKIDIHEVTHDGEARLEVATA
TMMEEDLTKKADFDDDGSQMEDRIHGEAQPWDNGQVAGSEGAGVEEEDEE
ELIQSLNFAPPDGSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold