Ggra7182.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7182.t1
Unique NameGgra7182.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1420
Homology
BLAST of Ggra7182.t1 vs. uniprot
Match: A0A2V3ICP0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP0_9FLOR)

HSP 1 Score: 627 bits (1617), Expect = 2.190e-197
Identity = 447/1319 (33.89%), Postives = 682/1319 (51.71%), Query Frame = 0
Query:   42 PFSYAGTAQLLRSSQAAPRAKLAAARHLLQRRALLPSALPLLQQHALYALHLAFVDRASPPSSSSSSSPRELADYWRLLHDVQHAATRRAQRVAELPPWLLPCAARHLLLPECTQPVARALWLLVAAPPTRALQPHAQLLASLSSLLGAHAQLRALALAQLRLFAQLQQQQPQHASVALSLCVPLLQPLLSSRVLRVPAQRVLARALFAQPNLPREPLLRFLADSTAPQLPPICAFLLTAYTRAEQQR--RAPPXXXXXXXXXXAASLKRRRAQLEHPHVLRFFQDVLHALSRHLQQQPQSVCVARVRALRALFVTAAQLELYRPSLHELSLSPPEKKSKSSANAFGVHSVAARIRTTFELVCTLIRQFACHPPSEHAEALLQAAVAIVNLSVDTVDALVPALLAACAQPCYRHQHAMLLSELLATYSSTRSIPRLLSHLKQRDRSLLGLYQSAFEQERFRHTLASTISRLPQAQAEQCIRTIGGEQLLSDDVQVVAFVSALILESSGDDKRQLVACVCETVVRSIVSCKQSTPNRCALLFLLSSLLFTVLKASLSEDATTMESCLKSGIMQSVCGFPFDIDDVDDFENKFVCMLEQQEAGGADADTCETYCTLRLLAALAHFGVRAGAAREDHAMVARVLALIFERVQRLEAAKDELRAWSSPFYGGFEFDKLVAVVASVLDIADLVVVEG--APRGLMAFLGALAVRESEYSALWVDMLEKRVVQQSFAKAVLSVLNKREKQGCGDEEEQVRGVLRVILLTPGGYMQQSDERRVAKSVARVMAGVSDRETKEKGLQVVLKFWRGGGSRVQSVVEECAMNDVSDSILLRLSDAAAEAERIAESAEGEQVIEEVVRMSERVVRRWTRNRAQLTATASGCFLRNVDALLHGAYLNSKIVALTLKRLGSVIEGMSSDSDWRRLVSSGSSESEAVRDAVKCVSVVLSIWGQLDGKWRDAHKSGRRAXXXXXXXXXXXXXXXXXXSVKLVTQHAQRGLNDATVGAARALLRGCCRHAAGRQEQLSGGTRRGAFVQLQVASAWHLVRSEHASARTVGVEMLSDMCTYDADGVVQLIGASVCNALQREL-----------QRQRRPRHAXXXXXXXXXX--AAAAVLCGARGASEKDTLLARDDGKLLGFTAVRQRRELSGIRLGRDVSATLVVLLLEA---------------EAAVAGAGAAAHETARLALAVV-------EAAVARRAPRRLSAHATQAVALWLAALARRCEDGGGDXXXXXXXXXXXXXXXXXXXXSETQLLARALHACGHLLRAHGRGAARWACAGALRLLTRSACARRG 1321
            PFSYA  A+LL++++ +   KL  AR LL+R+ L+P   PL+  H  Y L            +S      + + YW LLHD  H A R ++ V E P  LL  AA H++ P CT+ VA+A+ +L+  P  ++LQ    LL +++SLL  H  L  LAL+ L+++ Q+Q+Q+  H  + +S+C+PLL+P LSS +LR PA+ VL  A FAQPNL R+ ++ +++ S    LP    FLL AY   E++R                + S KR R   E  HV RFF+D++ AL+++L  + QS+ V R+ ALRALF T+A L+LYR                       VHS     +     + T                      ++V LSVDTVD+++P LL +C    +      +  ELL  Y+++R++PR  +H  + D SLLG+YQS F  +  R +LA T+ RLP+ QAE CI+TI    + SDD Q VAF+SA+I+E+S DDK QL+  VC  VVR I S ++    RCA LFLLSSLLF V+KA+++ D    +  LK GIMQ+ CGFPF IDD+ DF+ KFV  +E++     D D  E YC +RLL+ L H  V+    +EDHA + R++ L+F  V  L   +   +   +PF+ G +FD++V +V  ++D+ +L   +G   P G + FL  L  +      LW D+LEK+VVQ +F K +  VLNK +K    +    +    ++IL TP GYM +S+E+R+ K V R+ + +SD E + + L V+LK  +    +++ ++EE     ++ SIL +LS+ AAE  R++  ++    + +VVR++E V+ +WT+   +L       F+RNV+A +  ++ +S I+A+ L RL  V++     S      S  S +  ++  A++ VS++L++WG L             A                  SV  V    + G  D    ++R LL   C++   R ++ S  T+RG  +   +A A + +    A+ RT+GVEMLS MCT++++ V+  IG+++  A   EL           Q  R+   A            AA A L G+R  SE+ TL+  +  +   F + R RR+LSGIRL R++SA +VV L+E                E A + +   A E   +A + V       E  VARRAP RL  ++ Q V   LA +     D G                      SE Q++ + +  C ++L  HG    RW C G +R     A  + G
Sbjct:    9 PFSYAKAARLLQTARGSTDEKLRTARDLLKRK-LIPHPAPLILSHIFYVL-----------KNSPKEPDDQFSKYWALLHDTLHEAIRTSEYVPEFPDTLLRHAAEHIVQPSCTEAVAKAMTILLNFPLPQSLQDFGILLRNITSLLPLHPDLHVLALSVLKVYGQIQRQEQDHKKM-ISICLPLLEPFLSSSILRRPAEPVLTHAFFAQPNLSRDDIIVYMSKSVDEHLPETTHFLLNAYADTERRRTQELEENRRAISMRSKSGSSKRSRPLSELHHVQRFFRDLVSALAQNLVHE-QSLSVPRINALRALFETSASLDLYRTQFRRPF----------------VHSGGEETQERRPSIWTT---------------------SMVKLSVDTVDSILPTLLQSCCHRDHTDARGQVFHELLELYATSRAVPRFFNHFIKPDCSLLGMYQSIFLHDDLRKSLAITVFRLPKGQAEHCIKTIAVGNMKSDDAQSVAFLSAIIMENSRDDKSQLIQVVCNEVVRKIASLEECRSIRCASLFLLSSLLFAVVKANVTPDDDAFQVLLKCGIMQAACGFPFGIDDITDFQRKFVEKMEEE-----DLDPIEKYCCIRLLSVLVHVDVQQNVVQEDHAFIRRLIELLFTFVDALVPPEGREQLVPNPFFEGSKFDEIVPLVVGMMDVIELTF-QGYRTPHGFLRFLRFLVNKYPTVPDLWSDILEKKVVQDAFPKIIQGVLNKEKKDARANIS--LLATFKLILHTPSGYMPESEEKRIEKCVRRMYSDLSDNEERTEALNVLLKIGKCNPIKLKPIIEESVAYSLNSSILTKLSERAAETARVSSKSDRRSQLNDVVRLAEYVLEKWTKTSTELEVVLG--FVRNVEAAMCRSFSDSSIIAMALVRLAEVLK----KSCHACKASLLSKKDASIPHALRIVSLLLAVWGHLVQDSDPDDPEHNEAIQACVAFLVETMQHALLLSVNKVITKDKEGKYDEVFASSRDLLLSSCQYMPRRTDRFSCDTKRGFAISRHLAHALYFLYDRSAALRTIGVEMLSAMCTFESEEVISTIGSTIMKAFDDELSYLICKSAESLQDARKMEGALDTLCRVQGNVLAAGAALSGSRSTSEQQTLVLNERNEFSHFVSARNRRDLSGIRLSRELSAQIVVKLMEMLERLIGFLEMLYQNFERAKSMSRKEAEELEHIAWSSVLVGLDACETTVARRAPHRLDNNSIQEVLQSLAVVVAFTHDNG-----------------KRFVGSEEQMVTKTMRICRYILHVHGN-VGRWTCMGLVRRAVEGAAKKGG 1244          
BLAST of Ggra7182.t1 vs. uniprot
Match: A0A2V3IIQ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ3_9FLOR)

HSP 1 Score: 329 bits (844), Expect = 2.810e-96
Identity = 211/518 (40.73%), Postives = 305/518 (58.88%), Query Frame = 0
Query:   42 PFSYAGTAQLLRSSQAAPRAKLAAARHLLQRRALLPSALPLLQQHALYALHLAFVDRASPPSSSSSSSPRELADYWRLLHDVQHAATRRAQRVAELPPWLLPCAARHLLLPECTQPVARALWLLVAAPPTRALQPHAQLLASLSSLLGAHAQLRALALAQLRLFAQLQQQQPQHASVALSLCVPLLQPLLSSRVLRVPAQRVLARALFAQPNLPREPLLRFLADSTAPQLPPICAFLLTAYTRAEQQR--RAPPXXXXXXXXXXAASLKRRRAQLEHPHVLRFFQDVLHALSRHLQQQPQSVCVARVRALRALFVTAAQLELYRPSLHELSLSPPEKKSKSSANAFGVHSVAARIRTTFELVCTLIRQFACHPPSEHAEALLQAAVAIVNLSVDTVDALVPALLAACAQPCYRHQHAMLLSELLATYSSTRSIPRLLSHLKQRDRSLLGLYQSAFEQERFRHTLASTISRLPQAQAEQCIRTIGGEQLLSDDVQVVAFVSALILESSGDDKRQLVACV 557
            PFSYA  A+LL++++ +   KL  AR LL+R+ L+P   PL+  H  Y L            +S      + + YW LLHD  H A R ++ V E P  LL  AA H++ P CT+ VA+A+ +L+  P  ++LQ    LL +++SLL  H  L  LAL+ L+++ Q+Q+Q+  H  + +S+C+PLL+P LSS +LR PA+ VL  A FAQPNL R+ ++ +++ S    LP    FLL AY   E++R                + S KR R   E  HV RFF+D++ AL+++L  + QS+ V R+ ALRALF T+A L+LYRPS  +LS    EKK K  A A GV +VA  IR  F  VC  +   +    +     L +AA ++V LSVDTVD+++P LL +C    +      +  ELL  Y+++R++PR  +H  + D SLLG+YQS F  +  R +LA T+ RLP+ QAE CI+TI    + SDD Q VAF+SA+I+E+S DDK QL+  V
Sbjct:    9 PFSYAKAARLLQTARGSTDEKLRTARDLLKRK-LIPHPAPLILSHIFYVL-----------KNSPKEPDDQFSKYWALLHDTLHEAIRTSEYVPEFPDTLLRHAAEHIVQPSCTEAVAKAMTILLNFPLPQSLQDFGILLRNITSLLPLHPDLHVLALSVLKVYGQIQRQEQDHKKM-ISICLPLLEPFLSSSILRRPAEPVLTHAFFAQPNLSRDDIIVYMSKSVDEHLPETTHFLLNAYADTERRRTQELEENRRAISMRSKSGSSKRSRPLSELHHVQRFFRDLVSALAQNLVHE-QSLSVPRINALRALFETSASLDLYRPSFDDLSFIQAEKKLKKGAQASGVRAVAQEIREAFRKVCKALLDLSSEKTATDVSPLCRAATSMVKLSVDTVDSILPTLLQSCCHRDHTDARGQVFHELLELYATSRAVPRFFNHFIKPDCSLLGMYQSIFLHDDLRKSLAITVFRLPKGQAEHCIKTIAVGNMKSDDAQSVAFLSAIIMENSRDDKSQLIQVV 512          
BLAST of Ggra7182.t1 vs. uniprot
Match: A0A2V3IIM0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIM0_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 2.530e-58
Identity = 147/477 (30.82%), Postives = 243/477 (50.94%), Query Frame = 0
Query:  733 PRGLMAFLGALAVRESEYSALWVDMLEKRVVQQSFAKAVLSVLNKREKQGCGDEEEQVRGVLRVILLTPGGYMQQSDERRVAKSVARVMAGVSDRETKEKGLQVVLKFWRGGGSRVQSVVEECAMNDVSDSILLRLSDAAAEAERIAESAEGEQVIEEVVRMSERVVRRWTRNRAQLTATASGCFLRNVDALLHGAYLNSKIVALTLKRLGSVIEGMSSDSDWRRLVSSGSSESEAVRDAVKCVSVVLSIWGQLDGKWRDAHKSGRRAXXXXXXXXXXXXXXXXXXSVKLVTQHAQRGLNDATVGAARALLRGCCRHAAGRQEQLSGGTRRGAFVQLQVASAWHLVRSEHASARTVGVEMLSDMCTYDADGVVQLIGASVCNALQREL-----------QRQRRPRHAXXXXXXXXXX--AAAAVLCGARGASEKDTLLARDDGKLLGFTAVRQRRELSGIRLGRDVSATLVVLLLE 1196
            P G + FL  L  +      LW D+LEK+VVQ +F K +  VLNK +K    +    +    ++IL TP GYM +S+E+R+ K V R+ + +SD E + + L V+LK  +    +++ ++EE     ++ SIL +LS+ AAE  R++  ++    + +VVR++E V+ +WT+   +L       F+RNV+A +  ++ +S I+A+ L RL  V++     S      S  S +  ++  A++ VS++L++WG L             A                  SV  V    + G  D    ++R LL   C++   R ++ S  T+RG  +   +A A + +    A+ RT+GVEMLS MCT++++ V+  IG+++  A   EL           Q  R+   A            AA A L G+R  SE+ TL+  +  +   F + R RR+LSGIRL R++SA +VV L+E
Sbjct:   15 PHGFLRFLRFLVNKYPTVPDLWSDILEKKVVQDAFPKIIQGVLNKEKKDARANIS--LLATFKLILHTPSGYMPESEEKRIEKCVRRMYSDLSDNEERTEALNVLLKIGKCNPIKLKPIIEESVAYSLNSSILTKLSERAAETARVSSKSDRRSQLNDVVRLAEYVLEKWTKTSTELEVVLG--FVRNVEAAMCRSFSDSSIIAMALVRLAEVLK----KSCHACKASLLSKKDASIPHALRIVSLLLAVWGHLVQDSDPDDPEHNEAIQACVAFLVETMQHALLLSVNKVITKDKEGKYDEVFASSRDLLLSSCQYMPRRTDRFSCDTKRGFAISRHLAHALYFLYDRSAALRTIGVEMLSAMCTFESEEVISTIGSTIMKAFDDELSYLICKSAESLQDARKMEGALDTLCRVQGNVLAAGAALSGSRSTSEQQTLVLNERNEFSHFVSARNRRDLSGIRLSRELSAQIVVKLME 483          
The following BLAST results are available for this feature:
BLAST of Ggra7182.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ICP02.190e-19733.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIQ32.810e-9640.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIM02.530e-5830.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 865..885
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1253..1277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1255..1276
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 181..1276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:135964..140223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7182.t1Ggra7182.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 135964..140223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7182.t1 ID=Ggra7182.t1|Name=Ggra7182.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1420bp
MRAPSAPYLPKVANVNDSRVQTAPYHMISMAPSPSPPPPTPPFSYAGTAQ
LLRSSQAAPRAKLAAARHLLQRRALLPSALPLLQQHALYALHLAFVDRAS
PPSSSSSSSPRELADYWRLLHDVQHAATRRAQRVAELPPWLLPCAARHLL
LPECTQPVARALWLLVAAPPTRALQPHAQLLASLSSLLGAHAQLRALALA
QLRLFAQLQQQQPQHASVALSLCVPLLQPLLSSRVLRVPAQRVLARALFA
QPNLPREPLLRFLADSTAPQLPPICAFLLTAYTRAEQQRRAPPPSPSPQP
PPRAASLKRRRAQLEHPHVLRFFQDVLHALSRHLQQQPQSVCVARVRALR
ALFVTAAQLELYRPSLHELSLSPPEKKSKSSANAFGVHSVAARIRTTFEL
VCTLIRQFACHPPSEHAEALLQAAVAIVNLSVDTVDALVPALLAACAQPC
YRHQHAMLLSELLATYSSTRSIPRLLSHLKQRDRSLLGLYQSAFEQERFR
HTLASTISRLPQAQAEQCIRTIGGEQLLSDDVQVVAFVSALILESSGDDK
RQLVACVCETVVRSIVSCKQSTPNRCALLFLLSSLLFTVLKASLSEDATT
MESCLKSGIMQSVCGFPFDIDDVDDFENKFVCMLEQQEAGGADADTCETY
CTLRLLAALAHFGVRAGAAREDHAMVARVLALIFERVQRLEAAKDELRAW
SSPFYGGFEFDKLVAVVASVLDIADLVVVEGAPRGLMAFLGALAVRESEY
SALWVDMLEKRVVQQSFAKAVLSVLNKREKQGCGDEEEQVRGVLRVILLT
PGGYMQQSDERRVAKSVARVMAGVSDRETKEKGLQVVLKFWRGGGSRVQS
VVEECAMNDVSDSILLRLSDAAAEAERIAESAEGEQVIEEVVRMSERVVR
RWTRNRAQLTATASGCFLRNVDALLHGAYLNSKIVALTLKRLGSVIEGMS
SDSDWRRLVSSGSSESEAVRDAVKCVSVVLSIWGQLDGKWRDAHKSGRRA
ARACRRLLREALGAALGASVKLVTQHAQRGLNDATVGAARALLRGCCRHA
AGRQEQLSGGTRRGAFVQLQVASAWHLVRSEHASARTVGVEMLSDMCTYD
ADGVVQLIGASVCNALQRELQRQRRPRHAQAQRVRAAALAAAAVLCGARG
ASEKDTLLARDDGKLLGFTAVRQRRELSGIRLGRDVSATLVVLLLEAEAA
VAGAGAAAHETARLALAVVEAAVARRAPRRLSAHATQAVALWLAALARRC
EDGGGDDGDDDDGEGGEGGDDEGGDDSETQLLARALHACGHLLRAHGRGA
ARWACAGALRLLTRSACARRGAAAADALRAPLLLALRQARAVGGDDDGAV
CGALGGECVRALRHARGAAPLRRAALRGVAPLLLTASGAHFGGGDDHHDD
QVMARAAMAEARAQRYRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold