Ggra7177.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7177.t1
Unique NameGgra7177.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length260
Homology
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A2V3IIM9 (Histone chaperone ASF1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIM9_9FLOR)

HSP 1 Score: 346 bits (888), Expect = 5.960e-119
Identity = 169/188 (89.89%), Postives = 175/188 (93.09%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGSHFAAAAEINRQTNVA 259
            MAAVDIFDVKVLDNPAP+TNPLQFEITYDVRE+LKEDIEWKVIYVG AEDESHDQELDAVLLPADNTGRFMFVLQVD PN SLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTD DLHENPP KPL+NKIQRT+AAHEPRVTKFPHKFDFRE KTGTP EPELSTDGSHFA     N+Q N+A
Sbjct:    1 MAAVDIFDVKVLDNPAPYTNPLQFEITYDVRETLKEDIEWKVIYVGSAEDESHDQELDAVLLPADNTGRFMFVLQVDSPNPSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDADLHENPPPKPLVNKIQRTIAAHEPRVTKFPHKFDFREPKTGTPAEPELSTDGSHFATGV-ANQQANLA 187          
BLAST of Ggra7177.t1 vs. uniprot
Match: R7QHB1 (Similar to anti-silencing factor n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHB1_CHOCR)

HSP 1 Score: 293 bits (751), Expect = 4.220e-98
Identity = 142/188 (75.53%), Postives = 163/188 (86.70%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGSHFAAAAEINRQTNVA 259
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE+LKEDIEWKVIYVG AED+S DQELD+VL+PA+  GRF FVLQVDPPN + IPDSD+ GVTIVLLTCSY  AEF+RVGYYVSN+Y  P+L+ENPPSKP+I++I RT+AA +PRVTKFPHKFDF +   GT  +PELSTDG+HFAA A  + Q N+A
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREALKEDIEWKVIYVGSAEDQSRDQELDSVLVPAEAQGRFKFVLQVDPPNPAKIPDSDIAGVTIVLLTCSYENAEFVRVGYYVSNEYPTPELNENPPSKPIIDQITRTIAATDPRVTKFPHKFDFSQPLQGTSADPELSTDGAHFAAGA-ASGQVNMA 187          
BLAST of Ggra7177.t1 vs. uniprot
Match: probable histone chaperone ASF1A n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D949C (probable histone chaperone ASF1A n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D949C)

HSP 1 Score: 246 bits (628), Expect = 7.590e-79
Identity = 132/208 (63.46%), Postives = 148/208 (71.15%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTD--------------------------------PDLHENPP-SKPLINKIQRTVAAHEPRVTKFPHKFDFRE-VKTGTPTEPELSTDGSH 245
            MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRE LKEDIEW+V+YVG AED++ DQELDAVLLPAD  GRF FVLQV PP+SS IP +D+LGVTIVLLTCSYNGAEFIRVGYYV+N++ D                                P    +PP S P I +I RT+AA EPR+TKFPH FDF + V TGT  +PELS DG H
Sbjct:    1 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVREPLKEDIEWQVVYVGSAEDQTQDQELDAVLLPADTMGRFKFVLQVPPPDSSRIPAADILGVTIVLLTCSYNGAEFIRVGYYVNNEHPDFLPAPEPPAEDADDDMDTDDVVGSKRVELVSKPQPGASPPTSAPDIARITRTIAAAEPRITKFPHAFDFTQPVPTGTLADPELSGDGMH 208          
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A7S0ZH16 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH16_9RHOD)

HSP 1 Score: 227 bits (579), Expect = 9.530e-72
Identity = 113/182 (62.09%), Postives = 138/182 (75.82%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGSHFAAAAEIN 253
            MAAVDIF+V VLDNPA F +PL FEITY+VRE L EDIEWKV+YVG AEDES+DQEL++VLLPAD  GRF FVLQVD P    +P  D+LGVT++LL+CSY   EFIRVGYYV+N+YTDP+L ENPP+ P I+K+ R + A +PRVTKF HKFDF   +T    E  L+ +G+     A+ N
Sbjct:    1 MAAVDIFNVNVLDNPALFMHPLSFEITYEVREPLIEDIEWKVVYVGSAEDESYDQELESVLLPADTMGRFGFVLQVDAPRVEKLPVDDILGVTVILLSCSYKEKEFIRVGYYVNNEYTDPELIENPPATPQIDKLYRNIGADQPRVTKFAHKFDFSSDETPV-VEATLTENGATDFGLAQGN 181          
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A5J4Z2L2 (Histone chaperone ASF1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2L2_PORPP)

HSP 1 Score: 231 bits (588), Expect = 1.310e-71
Identity = 114/194 (58.76%), Postives = 142/194 (73.20%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTP-------TEPELSTDGSHFAAAAEINRQTNV 258
            MAAVDI +V VL+NPA FT+P+QFEITY+VRE+L++DIEWKV YVG AEDES+DQ+LD VLLPAD  GRF FVLQVD P   L+P+ DVLGVTI+LL+CSY   EFIRVGYYV+N+Y DP+L ENPP+  L++KI R + A +PRVTKFPHKFDF    T          T+ ++  D  ++    E    +NV
Sbjct:    1 MAAVDIVNVSVLENPATFTSPIQFEITYEVREALEDDIEWKVTYVGSAEDESYDQDLDVVLLPADAVGRFGFVLQVDAPKFELLPEEDVLGVTIILLSCSYKDKEFIRVGYYVNNEYVDPELAENPPAHALVHKIVRNIGADQPRVTKFPHKFDFVGDATTVDGQSAKCMTDMDMDMDEPYWGNNEEAKNTSNV 194          
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A6H5IK72 (Uncharacterized protein n=2 Tax=Trichogramma TaxID=7490 RepID=A0A6H5IK72_9HYME)

HSP 1 Score: 203 bits (516), Expect = 2.990e-62
Identity = 98/188 (52.13%), Postives = 129/188 (68.62%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGSHFAAAAEINRQTNVA 259
            MA V + +V VLDNP+PF NP+QFEIT++  E LKED+EWK+IYVGCAE E +DQ LD + +     GR MFV Q DPP+ + IP +D LGVT+VLLTCSY   EF+RVGY+++N+YTDP+L ENPP +P  +K+QR + A +PRVT+F   +D      GT T+     DG     AA  +  T+VA
Sbjct:    1 MAKVQVVNVAVLDNPSPFYNPMQFEITFECIEELKEDLEWKMIYVGCAESEEYDQILDTIYVGPIPEGRHMFVFQADPPDVTKIPVNDALGVTVVLLTCSYRNQEFVRVGYFINNEYTDPELKENPPQQPQFDKVQRNILADKPRVTRFKINWD-----DGTNTQSNTMNDGMDVQNAAADDSMTDVA 183          
BLAST of Ggra7177.t1 vs. uniprot
Match: M2W1D3 (Histone chaperone ASF1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1D3_GALSU)

HSP 1 Score: 200 bits (509), Expect = 3.420e-61
Identity = 92/154 (59.74%), Postives = 119/154 (77.27%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFD 225
            M+AV++  V VL+NP  F +P +FEITY+VRE+L++DIEWKVIYV CA+DES DQ LD VLLPAD  GRF F L+V  PN + IPD D+LG+T VL+TCSY   EFIR+GYY++N+Y D +++ENPP  PL+ +I+R + A EPRVT F H FD
Sbjct:    1 MSAVEVLQVDVLNNPGFFGDPFRFEITYEVREALQQDIEWKVIYVSCAKDESLDQVLDEVLLPADTVGRFQFTLEVAAPNPNKIPDDDLLGITAVLITCSYRDQEFIRIGYYLNNEYEDAEMNENPPCPPLLERIRRHIFAEEPRVTHFLHSFD 154          
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A4W3K5B9 (Uncharacterized protein n=7 Tax=Chondrichthyes TaxID=7777 RepID=A0A4W3K5B9_CALMI)

HSP 1 Score: 200 bits (509), Expect = 3.650e-61
Identity = 98/173 (56.65%), Postives = 122/173 (70.52%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGS 244
            MA V + +V VLDNP+PF NP QFEIT++  E L +D+EWK+IYVG AE E HDQ LD+VL+     GR MFV Q D PN+ LIPD+D +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP+L ENPP KP   K+QR + A  PRVT+F   +D     TG  TE   + D S
Sbjct:    1 MAKVQVLNVVVLDNPSPFNNPFQFEITFECIEDLPDDLEWKIIYVGSAESEEHDQVLDSVLVGPVPAGRHMFVFQADAPNAVLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELKENPPMKPDYAKLQRNILASNPRVTRFHINWD----STGEKTEDIENVDPS 169          
BLAST of Ggra7177.t1 vs. uniprot
Match: A0A8C4QHT1 (Anti-silencing function 1Ba histone chaperone n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QHT1_EPTBU)

HSP 1 Score: 199 bits (506), Expect = 8.560e-61
Identity = 95/170 (55.88%), Postives = 122/170 (71.76%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELST 241
            MA V + +V VLDNP+PF NP QFEIT++  E+L ED+EWK++YVG AE E +DQ LD+VL+     GR MFV Q D PN  LIPD+D +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP+L ENPP KP+ +K+QR + A  PRVT+F   +D  E  +     P  ST
Sbjct:    1 MAKVQVNNVVVLDNPSPFLNPFQFEITFECVENLPEDLEWKIVYVGSAESEDYDQILDSVLVGPVPAGRHMFVFQADAPNPELIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPVKPIYDKLQRNILASNPRVTRFQINWDDGEKVSELENLPPGST 170          
BLAST of Ggra7177.t1 vs. uniprot
Match: W5MV14 (Anti-silencing function 1B histone chaperone n=8 Tax=Neopterygii TaxID=41665 RepID=W5MV14_LEPOC)

HSP 1 Score: 199 bits (505), Expect = 1.250e-60
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0
Query:   72 MAAVDIFDVKVLDNPAPFTNPLQFEITYDVRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPPNSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSKPLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPE 238
            MA V + +V VLDNP+PF NP QFEIT++  E L ED+EWK+IYVG AE E +DQ LD+VL+     GR MFV Q D PN+SLIP+SD +GVT+VL+TC+Y G EFIRVGYYV+N+YTDP+L ENPP KP  +++QR + A  PRVT+F   ++      GTP + E
Sbjct:    1 MAKVQVLNVAVLDNPSPFGNPFQFEITFECMEDLPEDLEWKIIYVGSAESEEYDQTLDSVLVGPVPAGRHMFVFQADAPNTSLIPESDAVGVTVVLITCTYRGQEFIRVGYYVNNEYTDPELRENPPLKPDYSQLQRNILASNPRVTRFHINWE------GTPDKME 161          
The following BLAST results are available for this feature:
BLAST of Ggra7177.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIM95.960e-11989.89Histone chaperone ASF1 n=1 Tax=Gracilariopsis chor... [more]
R7QHB14.220e-9875.53Similar to anti-silencing factor n=1 Tax=Chondrus ... [more]
probable histone chaperone ASF1A n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D949C7.590e-7963.46probable histone chaperone ASF1A n=1 Tax=Mercenari... [more]
A0A7S0ZH169.530e-7262.09Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z2L21.310e-7158.76Histone chaperone ASF1B n=1 Tax=Porphyridium purpu... [more]
A0A6H5IK722.990e-6252.13Uncharacterized protein n=2 Tax=Trichogramma TaxID... [more]
M2W1D33.420e-6159.74Histone chaperone ASF1 n=1 Tax=Galdieria sulphurar... [more]
A0A4W3K5B93.650e-6156.65Uncharacterized protein n=7 Tax=Chondrichthyes Tax... [more]
A0A8C4QHT18.560e-6155.88Anti-silencing function 1Ba histone chaperone n=1 ... [more]
W5MV141.250e-6056.89Anti-silencing function 1B histone chaperone n=8 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 20..67
e-value: 1.4E-15
score: 58.0
IPR000456Ribosomal protein L17TIGRFAMTIGR00059TIGR00059coord: 7..67
e-value: 7.5E-21
score: 72.5
IPR000456Ribosomal protein L17PROSITEPS01167RIBOSOMAL_L17coord: 34..56
IPR006818Histone chaperone ASF1-likePFAMPF04729ASF1_hist_chapcoord: 72..225
e-value: 1.7E-59
score: 200.1
IPR006818Histone chaperone ASF1-likePANTHERPTHR12040ANTI-SILENCING PROTEIN 1coord: 72..231
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10Ribosomal protein L17coord: 1..77
e-value: 2.1E-24
score: 87.9
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 1..67
IPR036747Histone chaperone ASF1-like superfamilyGENE3D2.60.40.1490coord: 78..225
e-value: 5.4E-62
score: 210.1
IPR036747Histone chaperone ASF1-like superfamilySUPERFAMILY101546ASF1-likecoord: 72..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:125122..126780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7177.t1Ggra7177.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 125122..126780 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7177.t1 ID=Ggra7177.t1|Name=Ggra7177.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=260bp
MKHRVALRKLSRTSSHRKALFRNQVTSLIEHESIETTVAKAKELRRIADR
IITLGKKQTLNAKRRVNGPCIMAAVDIFDVKVLDNPAPFTNPLQFEITYD
VRESLKEDIEWKVIYVGCAEDESHDQELDAVLLPADNTGRFMFVLQVDPP
NSSLIPDSDVLGVTIVLLTCSYNGAEFIRVGYYVSNQYTDPDLHENPPSK
PLINKIQRTVAAHEPRVTKFPHKFDFREVKTGTPTEPELSTDGSHFAAAA
EINRQTNVA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR006818ASF1-like
IPR036373Ribosomal_L17_sf
IPR036747ASF1-like_sf