Ggra7174.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7174.t1
Unique NameGgra7174.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Homology
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BLAST of Ggra7174.t1 vs. uniprot
Match: A0A2V3IKX7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKX7_9FLOR)

HSP 1 Score: 394 bits (1013), Expect = 1.300e-133
Identity = 205/351 (58.40%), Postives = 267/351 (76.07%), Query Frame = 0 
Query:    1 MVVIPITANLFSVTTTLLSTLSELALYQTFRRILSITQCRALRRKKTLGIRSQNKRLQTLAWVSLALFIVLETVLSIFSDPVTIPQFTVEHCTRLVPSPFSTHTLTAGESGDEARVLCRKTDLEKGFFVKEYGANISIADEN-NAKRAVRCEGQELYGYFRGQQVNRDVRNETSACVRETCVFVIVDGEDLFTSARPTNEERSLEVDKTWFAFLQTQVRFKVSESSKRQMAMRLAEVMERGERDEERLRATALLGVKTDRCVRPDEEADERAGTKVDTGVLVGACVIWVVSLATVLGAESRWVRKMSFFDMGCELQWAQKSFR--AHDAENGEARIRGVEVDGEQCVLVVR 348
            M VIPI A+ FSV T LLSTLSELA Y+  RR+L+I QC+ L +     IR+Q +RL+T+AW SLA+F++LETVLSIF+DPVTIPQ  VE C +LV  PF+  TL AGE GDEAR+LCR+TDL  GF VKE GANI+ A+    ++R V C+ +E+YGY   QQ+NRDVRN+T+ C+ +TCVFV++DG+DL+ S RPT+EERS E +KTWF FL+TQV F+VS+  ++++ +RLA  ++ GERDEERLRA  LLG +  +CVR DE A  R  TKV+T VL+ ACVIWVV+L  ++  ES W+R+M FFDMGCE+QWAQ+SF     +A  GEA++RGV VDGE+CV+VVR
Sbjct:    1 MAVIPIAASSFSVITALLSTLSELATYRALRRVLAIAQCQVLCKSNASCIRTQRRRLKTIAWGSLAVFVLLETVLSIFNDPVTIPQNIVEDCLQLVAIPFAEDTLHAGERGDEARILCRRTDLADGFLVKELGANITNAEAAAESERNVWCDEREVYGYIPQQQLNRDVRNDTAVCIGKTCVFVLMDGQDLYMSPRPTSEERSREENKTWFGFLKTQVNFEVSDKLRQKVGIRLARALQSGERDEERLRAQTLLGTRKGQCVRQDESARGRDATKVETSVLIVACVIWVVALGALVVTESPWMRRMEFFDMGCEVQWAQRSFAESVDEAGEGEAKLRGVVVDGERCVMVVR 351
The following BLAST results are available for this feature:
BLAST of Ggra7174.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKX71.300e-13358.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..297
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..368
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 60..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:117413..118519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7174.t1Ggra7174.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 117413..118519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7174.t1 ID=Ggra7174.t1|Name=Ggra7174.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MVVIPITANLFSVTTTLLSTLSELALYQTFRRILSITQCRALRRKKTLGI
RSQNKRLQTLAWVSLALFIVLETVLSIFSDPVTIPQFTVEHCTRLVPSPF
STHTLTAGESGDEARVLCRKTDLEKGFFVKEYGANISIADENNAKRAVRC
EGQELYGYFRGQQVNRDVRNETSACVRETCVFVIVDGEDLFTSARPTNEE
RSLEVDKTWFAFLQTQVRFKVSESSKRQMAMRLAEVMERGERDEERLRAT
ALLGVKTDRCVRPDEEADERAGTKVDTGVLVGACVIWVVSLATVLGAESR
WVRKMSFFDMGCELQWAQKSFRAHDAENGEARIRGVEVDGEQCVLVVRAN
PFANGGEESSIVPTCTLN*
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