Ggra7170.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7170.t1
Unique NameGgra7170.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length464
Homology
BLAST of Ggra7170.t1 vs. uniprot
Match: A0A2V3II82 (MFS domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II82_9FLOR)

HSP 1 Score: 223 bits (567), Expect = 4.410e-63
Identity = 139/431 (32.25%), Postives = 238/431 (55.22%), Query Frame = 0
Query:   32 ILLMAICTMLVISCVEWTLLLFLN--HGTSLSNTHDVYFSATAFALLAPVFANPILGIVSARYGSGPTLCFSYLVGALGILMISLFRQSTFLFYVGYEVYALCTTLRIVRLSIIAEVVPTSSRTTVMGVHQLMAPIGALLGPLLWLLIQTWRGQFAIANWLVIDRFLINYLASVGLLVGMFVIGMATLRSLPTAVNDTSQENANVGGRYNSIAGGKSVKVDVNAANEDMSSIADVSGLEWSRFSRFGRFTYYCALTLLMESTMALVRVSFQPVLIGVYGADDEEVGKVYSIIAGLAFVPSVAVALLSRVVKDRDIMLMGMTLKLSGSLMCLPFFGRVRKWQLVTGYMLCSKASNFFLTAAFSAFSKSAGGKNQGKQMGYLWSVCQVGPAVIQFFFASSLVDLFGSWGFGICALPVLAGFVLVFHPWGWRLL 460
            + ++A+ TM+ ++ V  T++L++N  H TS +N    Y +A+A A   PV +N + G +++  G    L    ++ ALG+L++   R + ++F++GY +Y+   ++RI+R+SI++++VP   RTTV+  H LM P+GAL+GPL W+++  ++G F++   L IDRF + Y  +  +LV + +I    LR +PT   + S+++                 V +   N D + +     L   R   FG   Y+C +   +  +  +   +FQP+L+  +G  D ++G ++ +IA  A VP + VALLS+ + DR IM++G+  K+ G  + LP FG VR+WQ++ G+ML  KAS FF+TA  S F+K  G  +    +G L S   VG A+ Q      +   FG + F   +LP + G   +  P  W+ L
Sbjct:  106 VFILAVLTMVCMAIVSPTMVLYMNYVHFTSSTNI-TAYVTASAIASAVPVVSNIVFGRIASSIGPANALVLLGMLSALGMLLVFSMRSALWVFFLGYGLYSASLSMRIIRISILSQIVPEDKRTTVLATHSLMTPVGALVGPLGWIVLSRYKGSFSLGP-LTIDRFALAYGTAATILVIISLISATRLRGIPTPEGNGSRDHFEPPSH-----------VTIQTQNGDTTRV----NLHEFRSQVFG---YFCTIMFCVNMSSDIYMTAFQPILVNEFGVSDAKLGLIFEVIAMFAIVPPLLVALLSKYLMDRQIMVIGLFAKVLGMALFLPLFGPVREWQVIIGFMLIIKASVFFITACMSLFTKVLGTLSSSALIGLLASGSSVGSALAQVLIGDYIAQFFGGFKFVFFSLPAVVGMAAIVIPRYWKRL 516          
BLAST of Ggra7170.t1 vs. uniprot
Match: A0A7S0G3Y8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3Y8_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 5.370e-48
Identity = 136/426 (31.92%), Postives = 228/426 (53.52%), Query Frame = 0
Query:   40 MLVISCVEWTLLLFLNHGTSLSNTHDVYFSATAFA-LLAPVFANPILGIVSARYGSGPTLCFSYLVGALGILMISLFRQSTFLFYVGYEVYALCTTLRIVRLSIIAEVVPTSSRTTVMGVHQLMAPIGALLGPLLWLLIQTWRGQFAIANWLVID---RFLINYLASVGLLVGMFVIGMATLRSLPTAVNDTSQENANVGGRYNSIAGGKSVKVDVNAANEDMSSIADVSGLEWSRFSRFGRFTYYCALTLLMESTMALVRVSFQPVLIGVYGADDEEVGKVYSIIAGLAFVPSVAVALLSRVVKDRDIMLMGMTLKLSGSLM-CLPFFGRVRKWQLVTGYMLCSKASNFFLTAAFSAFSKSAGGKNQGKQMGYLWSVCQVGPAVIQFFFASSLVDLFGSWGFGICALPVLAGFVLVFHPWGWRLL 460
            M+ ++ V  TLLL+ N+    + T+  +F++ + A ++ PV  N ++G   A       +     +  LG+L++ +  +S +LF  GY + +L T+ RI RL+ ++E+VP   +T VM  H L  P+GA+LGP+ WL +  ++G+     W  I     F +N    V LL  +  +GM  L  +     ++     +  GR   I G   V++  N A E + S          +F R+  F Y+C +  L+  +    +V+FQP+L+  +   +  +G ++  I+ LA VP + VALLSR ++DR +ML+G+  K+ G L+ C PF G++  WQ V G +L  KAS FF T+A S F+K  G  + G  +G L SV  VGPAV Q      ++ ++G++ + +  +P + GF LV +PW ++ L
Sbjct:  129 MMTMTTVSPTLLLYTNYRGWTTETNLTFFASLSLANVVVPVIGNIVVGNWLAATSVRTAMMGMLSITILGLLLM-ITAESKYLFLAGYTLLSLNTSNRIARLTFLSEIVPAKQKTFVMANHALATPLGAMLGPICWLALVNYQGEAG--PWTFIPGVMSFRLNRFTLVFLLTLLVSLGMMVLVWIYFPGANSRDPEKSGTGRSAPIVG--PVQLSYNGAEETVDS---------GQF-RYRVFRYFCMVMFLINFSAGFFQVAFQPILVDYFKVTESSMGLIFETISVLAIVPPLLVALLSRFLEDRQLMLVGICAKMLGMLLYCFPF-GKMHVWQPVVGNILIIKASIFFFTSALSLFTKILGPLSGGAWIGILSSVAAVGPAVAQLLALRLVLTIYGTYWYFLFCVPAVLGFFLVAYPWFYKYL 538          
BLAST of Ggra7170.t1 vs. uniprot
Match: A0A7S3E9V2 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9V2_9RHOD)

HSP 1 Score: 177 bits (449), Expect = 5.200e-46
Identity = 132/425 (31.06%), Postives = 225/425 (52.94%), Query Frame = 0
Query:   40 MLVISCVEWTLLLFLNHGTSLSNTHDVYFSATAFA-LLAPVFANPILGIVSARYGSGPTLCFSYLVGALGI----LMISLFRQSTFLFYVGYEVYALCTTLRIVRLSIIAEVVPTSSRTTVMGVHQLMAPIGALLGPLLWLLIQTWRGQFAIANWLVIDRFL---INYLASVGLLVGMFVIGMATLRSLPTAVNDTSQENANVGGRYNSIAGGKSVKVDVNAANEDMSSIADVSGLEWSRFSRFGRFTYYCALTLLMESTMALVRVSFQPVLIGVYGADDEEVGKVYSIIAGLAFVPSVAVALLSRVVKDRDIMLMGMTLKLSGS-LMCLPFFGRVRKWQLVTGYMLCSKASNFFLTAAFSAFSKSAGGKNQGKQMGYLWSVCQVGPAVIQFFFASSLVDLFGSWGFGICALPVLAGFVLVFHPW 455
            M+ ++ +   LLL+ N+    + T+  +F++ + A ++ PV  N ++G   A      T   + ++G LGI    L++ +  +S+ LF  GY + +L T+ RIVRL+ ++E++P   +T VM  H L  P+GA+LGP+ WL +  ++ +     W  I  F+   +N       L  +  +GM  L  +     ++       G R   I G   V++  N + E + S          +F R+G F Y+C +  L+  +    +V+FQP+L+  +   +  VG ++  I+  A +P + VALLSR ++DR +ML+G+  K+ G  L C PF G+++ WQ V G +L  KAS FF T+A S F+K  G  + G  +G L SV  VGPA+ Q      ++ ++G++ + +  +P + GF LV HPW
Sbjct:  129 MMTMTTISPILLLYTNYRGWTTETNLTFFASLSLANVVVPVIGNIVVGNWLAA-----TSVRTAMMGMLGITILGLLLMITAESSHLFLAGYTLLSLNTSNRIVRLTFLSEIIPAKHKTFVMANHALATPLGAMLGPVSWLALVNFQAEAG--PWTFIPGFMGVRLNRFTLAFSLTVLVTLGMMVLVWIYFPGANSQGPGKRGGARSEPIVG--PVRLSYNDSEETVDS---------GKF-RYGVFGYFCMVMFLINFSAGFFQVAFQPILVDYFKVTESSVGLIFETISIFAIIPPLLVALLSRFLEDRQLMLVGICAKMLGMFLYCFPF-GKMQIWQPVVGNILIIKASIFFFTSALSLFTKILGPLSGGPMIGILSSVSAVGPAIAQLLALRLVLTIYGTYWYFLFTIPAVLGFFLVAHPW 533          
The following BLAST results are available for this feature:
BLAST of Ggra7170.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3II824.410e-6332.25MFS domain-containing protein n=2 Tax=Gracilariops... [more]
A0A7S0G3Y85.370e-4831.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E9V25.200e-4631.06Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 38..419
e-value: 1.4E-18
score: 66.9
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 26..454
e-value: 3.8E-20
score: 73.9
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 32..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 435..457
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 395..405
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 430..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 344..363
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 317..335
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 458..463
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 406..429
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 298..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 364..368
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 336..343
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..96
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 371..393
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 344..366
NoneNo IPR availableTMHMMTMhelixcoord: 435..457
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 280..302
NoneNo IPR availableTMHMMTMhelixcoord: 317..339
NoneNo IPR availableTMHMMTMhelixcoord: 119..138
NoneNo IPR availableTMHMMTMhelixcoord: 195..217
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 406..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:103497..104888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7170.t1Ggra7170.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 103497..104888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7170.t1 ID=Ggra7170.t1|Name=Ggra7170.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=464bp
MRPATDERCSTSLLHGKRTNIHETFSTPVITILLMAICTMLVISCVEWTL
LLFLNHGTSLSNTHDVYFSATAFALLAPVFANPILGIVSARYGSGPTLCF
SYLVGALGILMISLFRQSTFLFYVGYEVYALCTTLRIVRLSIIAEVVPTS
SRTTVMGVHQLMAPIGALLGPLLWLLIQTWRGQFAIANWLVIDRFLINYL
ASVGLLVGMFVIGMATLRSLPTAVNDTSQENANVGGRYNSIAGGKSVKVD
VNAANEDMSSIADVSGLEWSRFSRFGRFTYYCALTLLMESTMALVRVSFQ
PVLIGVYGADDEEVGKVYSIIAGLAFVPSVAVALLSRVVKDRDIMLMGMT
LKLSGSLMCLPFFGRVRKWQLVTGYMLCSKASNFFLTAAFSAFSKSAGGK
NQGKQMGYLWSVCQVGPAVIQFFFASSLVDLFGSWGFGICALPVLAGFVL
VFHPWGWRLLGAH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf