Ggra7143.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7143.t1
Unique NameGgra7143.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length401
Homology
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BLAST of Ggra7143.t1 vs. uniprot
Match: A0A2V3ITN6 (CENP-B-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITN6_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 4.880e-38
Identity = 83/123 (67.48%), Postives = 91/123 (73.98%), Query Frame = 0 
Query:   12 REEAYEINELLNEVARVCGRVNIRSLLYSPDERDCIETVNLETLRDSVVDRLVSEKANSQAFSLPEVPVLPSVNEQLKAFAIVRQVLDERGMIDSNLRTAVRDVQRAIRTEQAAKTGRTMLFG 134
            REEAYEINEL NEVARVCG  NIRSLLYSP+E DCIE V LETLRD+VV+RL++ K  +Q    P VP LP V EQLKA AIVR +LDER M  S LR  +RDVQR IRTE AAK  RT   G
Sbjct:  398 REEAYEINELFNEVARVCGLSNIRSLLYSPNESDCIERVTLETLRDTVVERLLASKVGNQNVITPHVPHLPPVKEQLKALAIVRLILDERAMTASQLRKVIRDVQRDIRTEHAAKQNRTPQTG 520
The following BLAST results are available for this feature:
BLAST of Ggra7143.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITN64.880e-3867.48CENP-B-like n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:643459..646193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7143.t1Ggra7143.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 643459..646193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7143.t1 ID=Ggra7143.t1|Name=Ggra7143.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=401bp
MLGRCRMDDGGREEAYEINELLNEVARVCGRVNIRSLLYSPDERDCIETV
NLETLRDSVVDRLVSEKANSQAFSLPEVPVLPSVNEQLKAFAIVRQVLDE
RGMIDSNLRTAVRDVQRAIRTEQAAKTGRTMLFGFRGSHPARQAPQSQPV
PQVRQTQTDQPSQPAHSVRLSQQTHLAPQIHPPQSSQPSLPSQSPPALQP
PEQSQQSQPCQQAQQAQQTQQSEKNQVEMTNPSVLDQVSTAVSIWTRYSK
AHRSAKSSEVLSRDQEKATTDIIVESESPAATPDPKGSRLNDSLPPDIPI
LTIADDESAMRDEESGTAAEQMEMCTRPVHSAEHSNDSVPEAKGHCSETP
SQVDVGQPVNQEHTVHGEPQVDGSQMEFSHPDVIHQEHRTDALEISEAPS
*
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