Ggra7104.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7104.t1
Unique NameGgra7104.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Homology
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BLAST of Ggra7104.t1 vs. uniprot
Match: A0A2V3J2I4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I4_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 1.380e-40
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0 
Query:   61 QPEELNTAQSFIEPKAKKRELQNTEFAFILTSLVTAVAGGPIITAWSALYFFLGRENDVPLWLCSLASLMSSALTDAFIWNFSNSHQNTGFIPYLLFVSGTAVSAVFDFDEFFRIAIPSGSQRNKLKKSDISPE----SGHRKQPSRTVNDLNAWDESFKEK 218
            QP+  +     IE +  K  L+NT+ AFILT +VT VAGGPIITAWSA++FFLGRENDVP WL  LA+   SAL+DAFI NFS+   +TG +PY+LF  GT +SAV D+DEFFR++    S +N   +   + E    S  +       +D+  WD++F+EK
Sbjct:   83 QPDSSHMEDRNIESEHSKTTLRNTDVAFILTGIVTTVAGGPIITAWSAIFFFLGRENDVPNWLRCLAAFFCSALSDAFISNFSSLEISTGLLPYILFGFGTTISAVLDYDEFFRLSAIEDSNKNNAVEKGANREKPIASATKSSKQGIESDIQEWDKAFEEK 244
The following BLAST results are available for this feature:
BLAST of Ggra7104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2I41.380e-4048.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..169
NoneNo IPR availableTMHMMTMhelixcoord: 150..167
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:535609..536280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7104.t1Ggra7104.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 535609..536280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7104.t1 ID=Ggra7104.t1|Name=Ggra7104.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MRSSYGFVNSVFMREFPRSHKSNIEGLPCRCQGTPIAVRRSASMCKEENN
TGNSVPRHVGQPEELNTAQSFIEPKAKKRELQNTEFAFILTSLVTAVAGG
PIITAWSALYFFLGRENDVPLWLCSLASLMSSALTDAFIWNFSNSHQNTG
FIPYLLFVSGTAVSAVFDFDEFFRIAIPSGSQRNKLKKSDISPESGHRKQ
PSRTVNDLNAWDESFKEKLNDQE*
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