Ggra7092.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7092.t1
Unique NameGgra7092.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra7092.t1 vs. uniprot
Match: A0A2V3J260 (Mitochondrial intermembrane space cysteine motif-containing protein MIX17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J260_9FLOR)

HSP 1 Score: 210 bits (534), Expect = 1.300e-66
Identity = 118/177 (66.67%), Postives = 132/177 (74.58%), Query Frame = 0
Query:    1 MPRRSSRPSGGRRPAPARTPARPPARSAATRTXXXXXXXXXXXXXXXXXXXXXXXXPPPVPAQPAQQGSAMGGFMANVASTGLGVMAGRAMDRTFFGGGGSAPEPVADAETAAAPAPYEYSAEEPVPDTVCAREVSEFRKCMERSGSDVVACQWNIDILAACQRQQQELGFAGAGRL 177
            MPRR+SRPSGGRRPAPAR PAR P RSA+TR+                      XX    PAQPAQQGSAMGGFMANVASTG+GVMAGRAMDR FFGGG SAP P    E  +  APYE + +E +PD+VCARE+SEF+KCMER+GSD+ ACQWNID+LAACQRQQQELGFA AGRL
Sbjct:    1 MPRRTSRPSGGRRPAPARGPARAPTRSASTRSRPAPPPAQTRAKSTAPPPQKATXXXXXAPAQPAQQGSAMGGFMANVASTGMGVMAGRAMDRAFFGGG-SAPAPEYAPEAESPAAPYEVTTDEQLPDSVCAREISEFKKCMERNGSDISACQWNIDVLAACQRQQQELGFANAGRL 176          
BLAST of Ggra7092.t1 vs. uniprot
Match: A0A7S1ERF7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERF7_9RHOD)

HSP 1 Score: 78.6 bits (192), Expect = 1.120e-14
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 0
Query:   60 VPAQPAQQGSAMGGFMANVASTGLGVMAGRAMDRTFFGGGGSAPEPVADAETAA-----APAPYEYSAEEPVPDTV---CAREVSEFRKCMERSGSDVVACQWNIDILAACQR 164
            VPA  +  GS +G F ANVAST  GV+ GRA+DRTFFGGG  AP   A+ ++AA      PA     ++    +++   C+ E+  FR+C++ + +D VACQ+N D+L  CQ+
Sbjct:  103 VPAPASGGGSMLGNFAANVASTATGVVVGRAIDRTFFGGGNHAP---AEEQSAAPSENYTPAQSMMDSQNTATESIGGACSFELDNFRQCLKDNNNDTVACQFNYDMLTECQK 212          
BLAST of Ggra7092.t1 vs. uniprot
Match: A0A5J4Z6V0 (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6V0_PORPP)

HSP 1 Score: 74.7 bits (182), Expect = 2.590e-14
Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   71 MGGFMANVASTGLGVMAGRAMDRTFFGGGGSAPEPVADAETAAAPAPYEYS---AEEPVPDTVCAREVSEFRKCMERSGSDVVACQWNIDILAACQRQQQE 168
            M    AN  ST LGV AGRA+DRTFFGGG SAP    D + A   AP +Y+   A +      C+ E SEF KC+E S  D  ACQW  D+L+ CQ+  +E
Sbjct:    2 MAQIAANATSTALGVAAGRAIDRTFFGGG-SAPAAEGDTQDAEEAAPQQYASAGAPKAANGGACSFESSEFSKCLETS--DASACQWYFDLLSQCQQNAKE 99          
The following BLAST results are available for this feature:
BLAST of Ggra7092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J2601.300e-6666.67Mitochondrial intermembrane space cysteine motif-c... [more]
A0A7S1ERF71.120e-1442.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z6V02.590e-1447.52Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..53
NoneNo IPR availablePANTHERPTHR13523:SF2COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2, ISOFORM A-RELATEDcoord: 1..167
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:408311..408844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7092.t1Ggra7092.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 408311..408844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7092.t1 ID=Ggra7092.t1|Name=Ggra7092.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MPRRSSRPSGGRRPAPARTPARPPARSAATRTRPAPSSTQTRARSTAPAT
QKSATAPPPVPAQPAQQGSAMGGFMANVASTGLGVMAGRAMDRTFFGGGG
SAPEPVADAETAAAPAPYEYSAEEPVPDTVCAREVSEFRKCMERSGSDVV
ACQWNIDILAACQRQQQELGFAGAGRL*
back to top