Ggra7091.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7091.t1
Unique NameGgra7091.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length673
Homology
BLAST of Ggra7091.t1 vs. uniprot
Match: A0A2V3J3J8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J8_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 7.520e-81
Identity = 172/410 (41.95%), Postives = 231/410 (56.34%), Query Frame = 0
Query:  260 QRIIAESLGSTIGNSQDSPPKPRKRGRPRGSKNKPKATPSVLGVPNHSRVENAEADAEDEAESDLLDLFERYNKSRIQDFQKHPQQSWKEDRLIAPNGLPGSGPDDFIFELMPLIAKMEAEENRVVSEKEKNIRRFMDKVFEQFASSHRSDRRQLNLKPFRLREDEKKVCIKCEGFGMVKCEYCEAYGFVDFGEGAERFYEEFGNNNVPLPKHVMGTMYYCPYCDGSSLEECGDCSGTGSIADRFSRKPGASRTPVNNYAKEEFNLDAFLEEEEDRIDVGLDGSILLRARKR--RRPKNVDFHRIRTGKPSAAQNEKQPVPQERPHTPSGYP-------------SPTISPAMSRLRTFLQKKGSAPLQGASRRTKRNSRYMGSTTTDFVHTTDYKVGRNLSQKKPIQFS 654
            +R   E LG     S    PK RKRGRP GS NK KA  S   +   S +E +   A DE + DL  L +   K R Q F+K P++ W++  L APNGLP SGP+D+ +ELMP+ +K+EA  NR +SE E  I+R     F++FAS+HRS  R  NLKPF+LRED+KK C  CEG GMV         FVDFG+ A +FYEEF    + LPKHVMG +Y+CPYC G + E C  C G+G I +  SRK GASRTP+NN+A EEF+++  +E E+DR+++GLDG++++RARKR  R+ K V  H    GK      E++   Q +    SG               +P     +SR       +G      +   +K         TTDF++ TDY+VG+ L     I FS
Sbjct:  224 RRERTEMLGQESTVSDYILPK-RKRGRPVGSTNKQKA--SDFPLDELSDMEWSSFVAGDEPDIDLDFLEDLIRKWRTQSFRKRPRKDWRKAYLKAPNGLPDSGPEDYFYELMPIFSKLEARRNRKLSEHEIEIKRLAAAAFQRFASTHRSSGRLANLKPFKLREDDKKTCSDCEGTGMVTXXXXXXXXFVDFGKNAHKFYEEFEEGTMLLPKHVMGNIYHCPYCGGLTRERCVPCLGSGVIEEANSRKRGASRTPINNFAWEEFDIEELIEREKDRVEIGLDGTVVMRARKRKSRKKKGVAEH----GKHETDMRERKAKRQAQRRLDSGGSDQDTEDEGLKSNLTPKKYSDISRNHALAATRGVMETPESINSSKYRPFRATGRTTDFLNITDYQVGQALRSHDQIPFS 626          
BLAST of Ggra7091.t1 vs. uniprot
Match: R7Q104 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q104_CHOCR)

HSP 1 Score: 162 bits (409), Expect = 4.790e-39
Identity = 81/200 (40.50%), Postives = 121/200 (60.50%), Query Frame = 0
Query:  354 APNGLPGSGPDDFIFELMPLIAKMEAEENRVVSEKEKNIRRFMDKVFEQFASSHRSDRRQLNLKPFRLREDEKKVCIKCEGFGMVKCEYCEAYGFVDFGEGAERFYEEFGNNNVPLPKHVMGTMYYCPYCDGSSLEECGDCSGTGSIADRFSRKPGASRTPVNNYAKEEFNLDAFLEEEEDRIDVGLDGSILLRARKRRR 553
            APNGL   GP D + EL+PL+AK E    R +++KE  ++  +D  +  +AS++++  R  NL+PFRL+++ ++VC +C G GM +        FVD GE AE+F EEF  N   LPK V G +Y+CP C G   E C +C G+G I D   R+ G +   V +      + D  L +E DRI++GLDG+I++RA+K +R
Sbjct:  197 APNGL-ADGPPDLLQELLPLLAKEEQRNARTLTDKELELKDRVDACWNLYASTYKNSERLDNLRPFRLKDEAERVCERCAGEGMAQXXXXXXXXFVDLGENAEKFEEEFKGNTFTLPKLVTGNIYHCPLCGGLKEERCIECFGSGVIRDSAERQEGEAAEDVGDAGWHALDFDELLRKEADRIEIGLDGTIVMRAKKHKR 395          
BLAST of Ggra7091.t1 vs. uniprot
Match: M2X3Z9 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3Z9_GALSU)

HSP 1 Score: 68.9 bits (167), Expect = 1.910e-9
Identity = 50/171 (29.24%), Postives = 81/171 (47.37%), Query Frame = 0
Query:  326 DLFERYNKSRIQDFQKHPQQSWKEDRLIAP--NGLP----GSGPDDFIFELMPLIAK--MEAEENRVVSEKEKNIRRFMDKVFEQFASSHRSDRRQLN-LKPFRLREDEKKVCIKCEGFGMVKCEYCEAYGFVDFGEGAERFYEEFGNNNVPLPKHVMGTMYYCPYCDGSS 487
            D  + +N S      KHP +      L +P  +GL     G G +D   +L  + +   +E +E   +   E + +  ++   E+  S  +  + Q + +KPF  +     +C +CEG GM+ CEYC   GFV FG G   F   +    V LP+ V G +YYCP+  G++
Sbjct:   50 DFVDNWNSS------KHPMEE-----LTSPISSGLGSHRRGVGLNDIPVDLGEVFSDPLLEEKELTELPADESSWKHAVEYALEEIHSQVKYSKSQFSWMKPFTNKSKNTLLCERCEGIGMMTCEYCHGQGFVRFGPG-NNFRIRYRQIEVVLPRRVWGDLYYCPWNGGNN 208          
The following BLAST results are available for this feature:
BLAST of Ggra7091.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3J87.520e-8141.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q1044.790e-3940.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X3Z91.910e-929.24Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 55..67
e-value: 6.8
score: 10.6
coord: 245..257
e-value: 25.0
score: 7.4
coord: 281..293
e-value: 2.8
score: 12.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 641..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 615..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:404326..406344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7091.t1Ggra7091.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 404326..406344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7091.t1 ID=Ggra7091.t1|Name=Ggra7091.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=673bp
MLGFGFTSSAPTLFQTIPDQYRLPGLCHRSQLYSQSRIASIAVLNTVLCT
NPELPRKRGRPKGSRNKSKSKEGQKRAEVLSSTTQFRELSEEKDRSHITA
EKKPGQAEAEKQVLDAEGLSPTDLDQIAKKQRPNARRNTQSAELSEGEVG
NNSHHGVENTHTPPPLRKRGQIPTQKAHDTPYEDLPPEGLESSRDTRTVR
KGGPPRRLKGHGHDDITNTDISSEGGGNVHKPSNASNKSSKSRSKGKRGR
PRMITNEFEQRIIAESLGSTIGNSQDSPPKPRKRGRPRGSKNKPKATPSV
LGVPNHSRVENAEADAEDEAESDLLDLFERYNKSRIQDFQKHPQQSWKED
RLIAPNGLPGSGPDDFIFELMPLIAKMEAEENRVVSEKEKNIRRFMDKVF
EQFASSHRSDRRQLNLKPFRLREDEKKVCIKCEGFGMVKCEYCEAYGFVD
FGEGAERFYEEFGNNNVPLPKHVMGTMYYCPYCDGSSLEECGDCSGTGSI
ADRFSRKPGASRTPVNNYAKEEFNLDAFLEEEEDRIDVGLDGSILLRARK
RRRPKNVDFHRIRTGKPSAAQNEKQPVPQERPHTPSGYPSPTISPAMSRL
RTFLQKKGSAPLQGASRRTKRNSRYMGSTTTDFVHTTDYKVGRNLSQKKP
IQFSPKKENIENDENNSNAEPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif