Ggra7086.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7086.t1
Unique NameGgra7086.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length191
Homology
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A2V3J2H7 (ATP synthase subunit d, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2H7_9FLOR)

HSP 1 Score: 258 bits (660), Expect = 2.330e-85
Identity = 123/183 (67.21%), Postives = 155/183 (84.70%), Query Frame = 0
Query:    8 RGVLRARAPIAHNVRRSLAAAAASDTEIQQLDPSKFFQEFSDSSVRSELSKMRDVEAELLQAISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWFTRES 190
            RGVLR+RAPI H  RRS AAA   + EIQ  DPS++F +FSD++VRSELSK+RD+E+EL+QA+ VK+ PIDW+QW  +I YPGLVDELKS YEA+PVPD+ E +K  D++++A F+PIIEEFS +AKEAEAETAELEK CEE+TYL+DN A +TVDEFL++YP VKKSIEDD+ANN+WF R+S
Sbjct:    8 RGVLRSRAPILHTARRSYAAATTKENEIQSFDPSQWFPQFSDTAVRSELSKIRDIESELMQALDVKEVPIDWEQWNIQIKYPGLVDELKSLYEATPVPDIAETKKAIDDEIEAVFQPIIEEFSKMAKEAEAETAELEKRCEEITYLRDNIANLTVDEFLDKYPAVKKSIEDDIANNRWFVRDS 190          
BLAST of Ggra7086.t1 vs. uniprot
Match: R7QR29 (ATP synthase subunit d, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR29_CHOCR)

HSP 1 Score: 155 bits (393), Expect = 4.470e-44
Identity = 77/163 (47.24%), Postives = 112/163 (68.71%), Query Frame = 0
Query:   27 AAAASDTEIQQLDPSKFFQEFSDSSVRSELSKMRDVEAELLQAISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWFTRE 189
            AA A  TE  +  P+ +FQEF D  +RS+L+ +R++E + ++ +S   T I+WD+W++ + YPGLV ELK  +E +PVPDV   ++   +++   F PI+ EF+ L KEAE    ELE+   E+T+L+DN   +TVDEFLE+YPTVK SIEDD+ANN+WF  E
Sbjct:   90 AAPAGQTE--RFKPTDWFQEFQDPQIRSQLNSLRELEDDAIRMVSADATTINWDEWESSVKYPGLVKELKEIHENAPVPDVTAEKEIFAKKLDELFDPILAEFAKLGKEAEETVVELEQRASEVTFLRDNIDTLTVDEFLEKYPTVKASIEDDIANNRWFVSE 250          
BLAST of Ggra7086.t1 vs. uniprot
Match: ATP synthase subunit d, mitochondrial-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FC9E73 (ATP synthase subunit d, mitochondrial-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FC9E73)

HSP 1 Score: 74.7 bits (182), Expect = 1.270e-13
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   67 LQAISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKW 185
            L A++ K  PIDWD +   I+ PGLV+  + AYEA  VP   + R     Q+    K + E      K A  E A+ E E +++  +K +F EMTVD++LE +P ++K  E+++A N W
Sbjct:   42 LDAVAAKPEPIDWDFYSKNISKPGLVEAFRKAYEAITVPYPVDVRTN---QIDKAEKEMEEHAVKTIKLANVEIAKYEVELQKIKSMK-SFEEMTVDDYLELHPEIRKQAEEEIARNDW 156          
BLAST of Ggra7086.t1 vs. uniprot
Match: A7SNG9 (ATP synthase subunit d, mitochondrial n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SNG9_NEMVE)

HSP 1 Score: 62.0 bits (149), Expect = 7.830e-9
Identity = 38/136 (27.94%), Postives = 74/136 (54.41%), Query Frame = 0
Query:   53 RSELSKMRDVEAEL---LQAISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKW 185
            R+++++ R +   L   L ++  K   IDW  ++  I+ PG+V+  + AYEA  VP  ++ +     ++    K + +E   L +E+     E + E E++   K +F +MTVDE+LE +P +KK  ++++  + W
Sbjct:   25 RADMARFRSIYDNLKSGLDSVPAKAETIDWAFYQKNISKPGMVESFRKAYEAITVPYPKDTQTA---KIDVVEKEMAQECEKLMRESRMRIKEYQAEMEKIKSQK-SFEDMTVDEYLEMHPELKKQADEEIKKHIW 156          
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A3M6TAV5 (ATP synthase subunit d, mitochondrial n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TAV5_POCDA)

HSP 1 Score: 61.2 bits (147), Expect = 1.640e-8
Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   67 LQAISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVP-DVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECE-ELTYLKDN--FAEMTVDEFLERYPTVKKSIEDDVANNKW 185
            L  ++ K  PI+WD +   I+ PG+V+  K AY A  VP  ++    K +E  K        E   LAKE+  E  E    CE ELT ++    + EM++DEFL+ +P +KK +++ + + +W
Sbjct:   42 LDGVAPKPEPINWDLYAKNISKPGMVEAFKKAYGAVTVPYPIDTLTSKINEAEK--------EMETLAKESIEEANEAIALCEAELTKIRSMKPYEEMSIDEFLDLHPEIKKFVDEKMQSGEW 156          
BLAST of Ggra7086.t1 vs. uniprot
Match: M2XM57 (F-type H+-transporting ATPase subunit d n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XM57_GALSU)

HSP 1 Score: 59.3 bits (142), Expect = 2.120e-7
Identity = 31/111 (27.93%), Postives = 63/111 (56.76%), Query Frame = 0
Query:   76 PIDWDQWKAEINY-PGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKW 185
            P+++++ + ++ + P LVDEL++ YE    P ++   K+   +V   ++ +I+E   + K          +   ++ Y++DN   +TVDE+LE +P +KK IE+D+   +W
Sbjct:  109 PVNFEELRRKVRFLPYLVDELQTLYENFEPPPLDNLVKELVREVDDYYQKLIQESIEIDKRIAVRNRLRRETKRKIQYIQDNIETITVDEYLELFPKLKKQIEEDIKERRW 219          
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A090M3L7 (ATP synthase subunit d, mitochondrial n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M3L7_OSTTA)

HSP 1 Score: 57.0 bits (136), Expect = 8.030e-7
Identity = 44/142 (30.99%), Postives = 73/142 (51.41%), Query Frame = 0
Query:   48 SDSSVRSELSKMRDVEAELLQAIS---VKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWF 186
            SD+S R EL  ++   A++  A++    K    D+   K +   P +VD  + AY++   P V        E++K +F  I  E  A A+ A+   AEL+ E + +   +   A MT+DE+ E  P +KK I+  +AN++WF
Sbjct:   38 SDASKR-ELMALQKAVADMRDAVNRVAYKGPEPDFAAMKKDTKMPEIVDVFEKAYKSVTKPSV---ASPEIEELKTSFAGIEAEARADAEVAKKRIAELDVELKAIADQRSKLATMTMDEYFEANPEMKKDIDQRIANDEWF 175          
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A1Y5IJQ3 (ATP synthase subunit d, mitochondrial n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IJQ3_OSTTA)

HSP 1 Score: 54.7 bits (130), Expect = 2.200e-6
Identity = 36/117 (30.77%), Postives = 60/117 (51.28%), Query Frame = 0
Query:   70 ISVKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWF 186
            ++ K    D+   K +   P +VD  + AY++   P V        E++K +F  I  E  A A+ A+   AEL+ E + +   +   A MT+DE+ E  P +KK I+  +AN++WF
Sbjct:    8 VAYKGPEPDFAAMKKDTKMPEIVDVFEKAYKSVTKPSV---ASPEIEELKMSFAGIEAEARADAEVAKKRIAELDVELKAIADQRSKLATMTMDEYFEANPEMKKDIDQRIANDEWF 121          
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A7R9T0V0 (ATP synthase subunit d, mitochondrial n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T0V0_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 2.220e-6
Identity = 40/142 (28.17%), Postives = 72/142 (50.70%), Query Frame = 0
Query:   48 SDSSVRSELSKMRDVEAELLQAIS---VKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWF 186
            SD+S   EL  ++   A++  A++    K    D+   + +   P +VDE + AY+    PD   A+    E ++++F  I  E  A A+ A    AEL+ E + +   +     +T+DE+ +  P +KK I+D + N++WF
Sbjct:   42 SDAS-HKELMALQKAVADMRDAVARAAYKGPEPDFAAMRKDTKMPEIVDEFEKAYKGVTKPD---AKSPEIEALRSSFVEIEAEAKAHAEHATKRIAELDLELKAIEEQRSKLGSITMDEYFQTNPELKKKIDDRIKNDQWF 179          
BLAST of Ggra7086.t1 vs. uniprot
Match: A0A6T5YJG4 (ATP synthase subunit d, mitochondrial n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6T5YJG4_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 8.300e-6
Identity = 39/137 (28.47%), Postives = 68/137 (49.64%), Query Frame = 0
Query:   53 RSELSKMRDVEAELLQAIS---VKDTPIDWDQWKAEINYPGLVDELKSAYEASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEELTYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWF 186
            R EL+ ++   A++  A++    K    D+   K E   P  V+E + AY++   PD+  A  + D  +K  F  +  +    A  A    AELE E + +   ++    MT+DE+ E  P +KK I++ + N++WF
Sbjct:   48 RRELAGLQKAVADMRDAMARMAYKGPEPDFAAMKKETKNPEFVEEFEKAYKSVTAPDM--AMTQVD-TLKKNFAELEAQAKKHATHATTRMAELEAELKSIETQREKIGTMTMDEYFETNPELKKKIDERIKNDQWF 181          
The following BLAST results are available for this feature:
BLAST of Ggra7086.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3J2H72.330e-8567.21ATP synthase subunit d, mitochondrial n=1 Tax=Grac... [more]
R7QR294.470e-4447.24ATP synthase subunit d, mitochondrial n=1 Tax=Chon... [more]
ATP synthase subunit d, mitochondrial-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FC9E731.270e-1336.97ATP synthase subunit d, mitochondrial-like n=2 Tax... [more]
A7SNG97.830e-927.94ATP synthase subunit d, mitochondrial n=1 Tax=Nema... [more]
A0A3M6TAV51.640e-833.33ATP synthase subunit d, mitochondrial n=1 Tax=Poci... [more]
M2XM572.120e-727.93F-type H+-transporting ATPase subunit d n=1 Tax=Ga... [more]
A0A090M3L78.030e-730.99ATP synthase subunit d, mitochondrial n=1 Tax=Ostr... [more]
A0A1Y5IJQ32.200e-630.77ATP synthase subunit d, mitochondrial n=1 Tax=Ostr... [more]
A0A7R9T0V02.220e-628.17ATP synthase subunit d, mitochondrial n=2 Tax=Ostr... [more]
A0A6T5YJG48.300e-628.47ATP synthase subunit d, mitochondrial n=1 Tax=Ostr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..153
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPFAMPF05873Mt_ATP-synt_Dcoord: 58..174
e-value: 2.0E-14
score: 53.7
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPANTHERPTHR12700ATP SYNTHASE SUBUNIT D, MITOCHONDRIALcoord: 53..185
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialGENE3D6.10.280.70coord: 29..152
e-value: 1.7E-14
score: 55.9
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialSUPERFAMILY161065ATP synthase D chain-likecoord: 55..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:395350..395922 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7086.t1Ggra7086.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 395350..395922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7086.t1 ID=Ggra7086.t1|Name=Ggra7086.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=191bp
MLSTLLARGVLRARAPIAHNVRRSLAAAAASDTEIQQLDPSKFFQEFSDS
SVRSELSKMRDVEAELLQAISVKDTPIDWDQWKAEINYPGLVDELKSAYE
ASPVPDVEEARKKADEQVKATFKPIIEEFSALAKEAEAETAELEKECEEL
TYLKDNFAEMTVDEFLERYPTVKKSIEDDVANNKWFTRES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008689ATP_synth_F0_dsu_mt
IPR036228ATP_synth_F0_dsu_sf_mt