Ggra7085.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7085.t1
Unique NameGgra7085.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length514
Homology
BLAST of Ggra7085.t1 vs. uniprot
Match: A0A2V3J2D6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2D6_9FLOR)

HSP 1 Score: 350 bits (899), Expect = 1.060e-111
Identity = 202/502 (40.24%), Postives = 295/502 (58.76%), Query Frame = 0
Query:   15 FKRRRCEWITTVRQGSYKQYHLLDLSDDVLMVVMRRLLPRKESLQGRDLAAYRDVANLAFTCRRLLNLFRIVRTTPVEICGLFDQLVIDPSPQGQLCFPPIGDIQFFRNLIGDSGVELRRLSLPFLPAEHTSTVLRLLFSVCFHLERLHLADAGTILSMSTELLSRSPIDNLRIYFPTASTLKSLSVFEKKWNPIWHCNVSSHSFNSRFLDVIRSHEALVCRRHKRK-LVIKLKNSNAVQGILEIVYPLLIPQLSLLRYIERLGTQH--EPHLVVTTSGASDLGNLLMEKASTIDNITGSDGHDLRTLFIRSHRAVDMFLRSELPRKEAVQREVKGVTFVDVGIPLSDWSSCVKLVKCMLELFG-EQNEVRHLQISRGIVFFSDSPEVLHFLTRFKALKRIHFSEPAETLNTTQFSYPLTDKVFLEHLPTILCILQDNCQSLETVNMSSCFPVFPFGKREELRPWIDCALTTLTQLENKSMSLSMDGMRRVLLKWLERVNLK 512
            FKRRR  W++ V   SY +Y LLDLSDDVL V+M+RLLPR + L+GR  A+YRDV NLAFTCRRL N+FR+VR  P E+ GLFDQ+++ PS  G L +P   +  FFRNLIGD GVELR+L LP L +   S ++ L+ S+C  L  L L DAG +   + E L+ S I  LR++ P+  TL+ L+    + +  W C VS H F  +    I+    L+C R K   L  +LK       +L  V PLLI +   + YI +   +   EP L +     S       E +S +D      G  +R L ++S   ++ +LR+E   KE V++  + + F+D+G      +S +K+ +C+L++   E N +  L ISR  V     P V+  L R K L++IH  + +    + Q    L D +FL+ LP  +  LQ++C+SL+T+NMS+CF VFPF KR+ LRP I+ AL  L++ E+ + ++++DG+RR L +WL+RVNLK
Sbjct:   38 FKRRRTTWMSNVALRSYTEYRLLDLSDDVLSVIMKRLLPRTKVLRGRSFASYRDVVNLAFTCRRLANIFRLVREVPSEVDGLFDQVLLGPSTDGLLRYPSPAEAPFFRNLIGDCGVELRKLCLPCLSSVEISPLVNLVVSICVQLRALRLTDAGALSEEAVEQLTSSSISTLRVFRPSVQTLRKLAKSGDQCHTFWICGVSEHFFTEQTRKFIQESPTLLCNRDKPGGLKFRLKTGEG--NVLRAVCPLLIQRHPFVEYIYKDEDKSVIEPRLTIRCPRISRWALSKNENSSVVDIPAAFKGIPVR-LTLQSLNQIEEYLRAEKSVKEQVKKNFENLVFIDIGFEFGSEASGLKVCECLLDILNSENNRLYLLNISREFVALGHHPVVVDLLKRTKQLRKIHLGDFSTEQRSGQAMDGLRDDLFLDRLPMFVDRLQEHCKSLQTLNMSTCFQVFPFEKRQALRPKIENALHRLSEYESGAEAVNVDGLRRALWRWLDRVNLK 536          
BLAST of Ggra7085.t1 vs. uniprot
Match: A0A2V3J397 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J397_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 4.300e-52
Identity = 153/517 (29.59%), Postives = 240/517 (46.42%), Query Frame = 0
Query:   15 FKRRRCEWITTVRQGSYKQYHLLDLSDDVLMVVMRRLLPRKESLQGRDLAAYRDVANLAFTCRRLLNLFRIVRTTPVEICGLFDQLVIDPSPQGQLCFPPIGDIQFFRNLIGDSGVELRRLSLPFLPAEHTSTVLRLLFSVCFHLERLHLADAGTILSMSTELLSRSPIDNLRIYFPTASTLKSLSVFEKKWNPIWHCNVSSHSFNSRFLDVIR-----SHEALVCRRHKRKLVIKLKNSNAVQGILEIVYPLL----------IPQLSLLRYIERLGTQHEPHLVVTTSGASDLGNLLMEKASTIDNITGSDGHDLRTLFIRSHRAVDMFLRSELPRKEAVQREVKGVT---FVDVGIPLSDWSSCVKLVKCMLELFGEQNEVRHLQISRGIVFFSDSPEVLHFLTRFKALKRIHFSEPAETLNTTQFSYPLT--DKVFLEHLPTILCILQDNCQSLETVNMSSCFPVFPFGKREELRPWIDCALTTLTQLENKSMSLSMDGMRRVLLKWLERVNL 511
            FKRRR  W++T+      +Y LLDL DDVL+V+ R+LLP    L+GR   +YRD +N AFTCRRL  LF IVR  P  I  ++ Q +            P+ + +FFR+++ D+   LR L LP  PA   + ++ L+ S    L   HL D G +    +  L+ SPI  L I  P    + +L+  E++        VS+  F   +   IR     +H+A  CR     L++K   +     I  ++  +L          +  +S L        Q E  + + TS    +   L   +   D    S    +  L + S   ++ FL ++   K   +  ++  +    +   + L + S+  +L +  L LF   N++  L++SR  V F+  P V   L R + LK I    P   +     S P T  D +FL+ LP  +  LQ  C+S ET+ M SCFP     + + LR  I+ AL  + + EN+  ++  DG+RR LL W+ R+ L
Sbjct:   15 FKRRRIAWLSTLTPRVQARYRLLDLHDDVLLVIFRKLLPPSSVLRGRSFTSYRDASNFAFTCRRLTELFHIVRVLPYSIDAVYHQHL-----------SPVANSRFFRSVVADTRTMLRELHLPPFPACEMNDLVSLVLSSAPCLRAFHLTDDGRLSFAVSLALADSPIRTLHILEPREDCILALADEERRVFMSTFREVSTCFFREVYHHFIRQRTVQTHDA--CRGAGTHLILKPSKNAGRSRIFPVIREMLESRLADSTDSVTHVSALVLHRLQKPQKELSVALQTSSVRPVQYFL---SPPNDTHRFSRAVGVLRLDLSSLSDIEQFLTADQRTKTRARYRIRATSTLCHIRSNLSLGNVSNFRRLCRFFLTLFSCSNQIHTLEVSREFVAFAHLPIVPRLLLRLRRLKMICLRNPVTQIADKHPS-PSTVCDDLFLDRLPLFIDHLQRYCESFETITMESCFPRLNADRTQGLRRSIENALDRIARYENQRKNVDGDGLRRSLLAWIARIEL 514          
The following BLAST results are available for this feature:
BLAST of Ggra7085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2D61.060e-11140.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3974.300e-5229.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:391780..393321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7085.t1Ggra7085.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 391780..393321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7085.t1 ID=Ggra7085.t1|Name=Ggra7085.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=514bp
MRPMLYNDLPSIPEFKRRRCEWITTVRQGSYKQYHLLDLSDDVLMVVMRR
LLPRKESLQGRDLAAYRDVANLAFTCRRLLNLFRIVRTTPVEICGLFDQL
VIDPSPQGQLCFPPIGDIQFFRNLIGDSGVELRRLSLPFLPAEHTSTVLR
LLFSVCFHLERLHLADAGTILSMSTELLSRSPIDNLRIYFPTASTLKSLS
VFEKKWNPIWHCNVSSHSFNSRFLDVIRSHEALVCRRHKRKLVIKLKNSN
AVQGILEIVYPLLIPQLSLLRYIERLGTQHEPHLVVTTSGASDLGNLLME
KASTIDNITGSDGHDLRTLFIRSHRAVDMFLRSELPRKEAVQREVKGVTF
VDVGIPLSDWSSCVKLVKCMLELFGEQNEVRHLQISRGIVFFSDSPEVLH
FLTRFKALKRIHFSEPAETLNTTQFSYPLTDKVFLEHLPTILCILQDNCQ
SLETVNMSSCFPVFPFGKREELRPWIDCALTTLTQLENKSMSLSMDGMRR
VLLKWLERVNLKL*
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