Ggra7081.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7081.t1
Unique NameGgra7081.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length308
Homology
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A2V3J2E9 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2E9_9FLOR)

HSP 1 Score: 334 bits (856), Expect = 1.120e-111
Identity = 168/299 (56.19%), Postives = 215/299 (71.91%), Query Frame = 0
Query:    9 LFMASFVLLYAEPMHFEKAIFKVSYIRGGEKVQRLRLSVDRESLKQIASPDALRIDPTDSIACQASFLDDQEQPAAPAQVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADLEFWRKDGSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNVFPLTISDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKMLLERTDE 307
            L + SFV      + FEKA FKVSY++ GEK+ R R + DR+S+ Q A+ D ++I PTDSI+CQA+FLDD ++PAA  Q F R EN+ +G DN YLLRK+GRD KVD+ L +EIKADL+FWR + +Y +QL+MG  ELDSS TW+IT+NM F   +             +D F+EP R VFDFD+SVKKSLLPEFISP+  PEKRAH  ++I+A+  V++PI VLLF W KM VFPL +   D   +++GFE CVL HIAAL MFW+KWNIV TW+VM VLMIPTY LG+K+L E  D+
Sbjct:    9 LLLLSFVFTSVCAIRFEKAAFKVSYVQVGEKIHRYRAATDRQSINQPATYDQVQIQPTDSISCQATFLDDDQEPAATTQAFLRFENRQSGADNIYLLRKRGRDMKVDVNLAREIKADLQFWRHNDTYLVQLIMGGLELDSSTTWSITDNMRFKEAS-------------TDAFKEPARGVFDFDVSVKKSLLPEFISPITPPEKRAHHLLIIAALAGVLLPIPVLLFGWWKMGVFPLRLKSDDKGMLVVGFELCVLAHIAALAMFWLKWNIVTTWKVMAVLMIPTYLLGRKLLSESDDK 294          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A7S1ERM2 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERM2_9RHOD)

HSP 1 Score: 111 bits (278), Expect = 7.580e-25
Identity = 75/231 (32.47%), Postives = 116/231 (50.22%), Query Frame = 0
Query:   82 PAAPAQVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADLE---FWRKDGSYRIQLVMGDSELDSSQT--WTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNVFPLTI-SDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKMLLERTD 306
            P  P QVF R+ +  T +   Y+ ++      V I    E K + +   FW+ +G Y + +++GD  + S     W +   +      +       SS P           VFDFD+S K++LLPEF+   P+ EKRA  A+VI   I V +P +  + V  +M+VFPLTI + G +   + GF  CV  +I  L +FW+ W I+ TW+ M +L  PT Y G ++L + T 
Sbjct:  104 PFYPHQVFVRVRDLETKESLVYIGQRSKDKVVVKINFKDESKLNSQEDSFWKHNGDYSMSVILGDKAMGSDGIIKWELLNQLKL---VIRGGKRTASSTP----------GVFDFDLSAKRTLLPEFLWEKPSAEKRAPIAIVIVFCILVTLPSVGFIVVMSRMSVFPLTIPASGSSRLAVFGFFGCVALYILVLTLFWLGWTILSTWKYMLLLAPPTIYAGHRVLSDFTS 321          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A7S1XAV6 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAV6_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 6.250e-21
Identity = 75/237 (31.65%), Postives = 115/237 (48.52%), Query Frame = 0
Query:   76 LDDQEQPAAPAQVFFRIENKNT------GK-DNFYL--LRKKGRDFKVDIKLTKEIKADLEFWRKDGSYRIQLVMGDSELDSSQT--WTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNVFPLTISDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKML 301
            L D E P  P Q+F R    +       GK +  YL  L+  G   +V  +LT   K DL+FW   G Y+++LV+GD  + S +   WT+   +IF                ++ P  + +  VFDFD+S+KKSL PEFI      E+RA     +      + P+L L+ +W ++  FPL +         LGF+ C++ +   LV FW+ W I+ T + + +L IPT   G + L
Sbjct:   52 LTDVESPP-PRQMFVRFTKNDKLIRYPQGKREVVYLGNLKGSGPSSRVSFELTVHPK-DLDFWDSKGKYQMELVVGDPRMKSPRVMVWTLCNEVIFDY--------------INVPASKRKPPVFDFDVSIKKSLQPEFIFEPSPVERRAPRLFSLLWAALTLAPLLALIRMWSRLGAFPLDLPTSSLP--FLGFQFCLVLNALLLVSFWLGWTIIATTKYLLILAIPTILFGHQAL 270          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A7S2ZKG0 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKG0_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 3.210e-15
Identity = 49/178 (27.53%), Postives = 85/178 (47.75%), Query Frame = 0
Query:   68 SIACQASFLDDQ-EQPAAPAQVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADLEFWRKDGSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNVFP 244
            +++    F D + + PA P QVF R  + ++G+   ++ +K G  F   ++  K    + + WR   S+ + +++GD  +D    WT+ E+++F                 + P   P ++VFDFDISVKKS+ PEF     +    A   +V    + V+ P L L+ VW  +   P
Sbjct:   77 TMSVSMEFFDSKADSPAFPKQVFIRFRDNDSGEFADFIAKKSGSSFLASLRFLKLSDEEPKLWRDLASFSMSILVGDVSMDGVNVWTVCEDVLFM---------------YNRPKSPPLKSVFDFDISVKKSMQPEFAVDRSSILPTAPVPIVFLFCVLVVTPFLGLISVWSVLGALP 239          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A5J4YHR6 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHR6_PORPP)

HSP 1 Score: 82.0 bits (201), Expect = 3.490e-14
Identity = 71/231 (30.74%), Postives = 100/231 (43.29%), Query Frame = 0
Query:   84 APAQVFFRIENKNTGKDNFYLLRKKGRDFKVDIKL-------TKEIKADLEFWRKDGSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNV---FPLTI-SDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKMLLE 303
            AP Q F R+ + N       L  +  +  K+   +       T    A   +W+    Y  +L++GD         T TEN I      A     +   P           VFD  +SVKK   PEF   +PAP  R+ P + I A+  V+  + +L FV    +V   FPL I   G        F AC+      L MFW++WNI+ TW+V+ V +IPT   GQK+L E
Sbjct:   93 APQQAFLRVSDLNQSDHLVVLPARSEKKTKLSFAVSPGKQPTTSSGGAAAPYWKHQHVYSFELLLGD---------TSTENAIVYQVISALRVDFRKPPPXLXXXX-----VFDXXMSVKKEPQPEFRWELPAP--RSSPPMAIIAVFTVLAVLPMLGFVGASASVLGCFPLAIPKSGPALAAFAVFFACLTVIAGILFMFWLRWNILTTWKVLAVALIPTVISGQKVLYE 307          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A3S1BX71 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BX71_ELYCH)

HSP 1 Score: 65.9 bits (159), Expect = 2.210e-8
Identity = 52/224 (23.21%), Postives = 104/224 (46.43%), Query Frame = 0
Query:   87 QVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADL-----EFWRKDGSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNV----FPLTISDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKML 301
            Q F R+ N++T ++  ++          D  LT +   D+     +F  K G Y ++L++GD+ +++  +WT+ +              +  + P  D  ++ + N +      KK   PE       PEKR   ++ ++    V+ P L+LL +W ++ V    FP+++S        +GF  C+         +WV+ N+  T + +G+L +PT++ G ++L
Sbjct:  279 QTFVRLTNQDTKQEIIFVTES-------DASLTNKFDLDVGSNAKDFGHKSGKYTMELIVGDAVIENPFSWTVAD--------------VSLTFPEGDAAKKDQANQY-----AKK---PEIQHKFNQPEKRPPASLSLAFTALVLSPFLILLVLWLRIGVNISNFPVSLSA-------IGFHVCLGGVFILYYFYWVQLNMFDTLRYLGILAVPTFFFGNRLL 466          
BLAST of Ggra7081.t1 vs. uniprot
Match: K1QHM2 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=3 Tax=Crassostrea TaxID=6564 RepID=K1QHM2_CRAGI)

HSP 1 Score: 62.4 bits (150), Expect = 3.650e-7
Identity = 52/221 (23.53%), Postives = 100/221 (45.25%), Query Frame = 0
Query:   87 QVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADLEFWRKDGSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIA--VIVPILVLLFVWRKMNV----FPLTISDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKML 301
            Q F ++ N+ T ++  ++       F +DI  +       +F    G Y ++L++GD+ +++  +W + E  +   E                  Q P+    D     + +  PE       PEKR  PA V+S +    V+ P+L+L+ +W K+ V    FP+++S        +GF  C+        ++WV+ N+  T + +G+L +PT+  G ++L
Sbjct:  493 QTFLKLTNQKTNQEIIFVADAASNKFDLDIGSSAG-----QFGHLSGKYSMELIIGDAVIENPFSWALGEVSLNFPEG-----------------QTPKDKGLD-----RYAKKPEIKHLFREPEKR--PAAVVSTVFTFLVLAPVLILVLLWMKIGVNVSNFPMSLSA-------VGFHLCLAAIFGLYYLYWVELNMFQTVRYLGLLALPTFIFGNRLL 677          
BLAST of Ggra7081.t1 vs. uniprot
Match: A0A6P7SDZ9 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SDZ9_OCTVU)

HSP 1 Score: 58.2 bits (139), Expect = 8.430e-6
Identity = 52/224 (23.21%), Postives = 96/224 (42.86%), Query Frame = 0
Query:   87 QVFFRIENKNTGKDNFYLLRKKGRDFKVDIKLTKEIKADLEFWRKD-----GSYRIQLVMGDSELDSSQTWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLLPEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNV----FPLTISDGDNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKML 301
            Q F R+ N  T ++  ++          D  +T +   D+    KD     G Y ++L++GD+ +++  +W + + ++   E  A       S P  + +            S K ++  EF      PEKR    V       V++PI +L  +W K+ V    FP+++S        +GF  C+        ++W   N+  T + +G+L IPT+  G ++L
Sbjct:  429 QAFVRLTNLKTKQEIIFVTE-------ADNSMTNKFDLDVGSGAKDFGSLSGRYSMELIIGDAVIENPFSWYLADTVLTFPEATA------PSKPAVNQY------------SPKPTINHEF----KRPEKRPPKLVSFIFTALVVLPIFILFILWGKIGVNISNFPMSVSA-------IGFHVCLASIFGCYSLYWKSLNMFQTLKYVGLLSIPTFLFGNRLL 616          
The following BLAST results are available for this feature:
BLAST of Ggra7081.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J2E91.120e-11156.19Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7S1ERM27.580e-2532.47Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7S1XAV66.250e-2131.65Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7S2ZKG03.210e-1527.53Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A5J4YHR63.490e-1430.74Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A3S1BX712.210e-823.21Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K1QHM23.650e-723.53Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6P7SDZ98.430e-623.21Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008814Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1PFAMPF05817Ribophorin_IIcoord: 60..301
e-value: 2.6E-23
score: 82.4
IPR008814Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1PANTHERPTHR12640RIBOPHORIN IIcoord: 74..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 238..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 253..275
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..216
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 281..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 253..275
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 280..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:380518..381441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7081.t1Ggra7081.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 380518..381441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7081.t1 ID=Ggra7081.t1|Name=Ggra7081.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=308bp
MVAFRFTLLFMASFVLLYAEPMHFEKAIFKVSYIRGGEKVQRLRLSVDRE
SLKQIASPDALRIDPTDSIACQASFLDDQEQPAAPAQVFFRIENKNTGKD
NFYLLRKKGRDFKVDIKLTKEIKADLEFWRKDGSYRIQLVMGDSELDSSQ
TWTITENMIFSNETLAYTDHLKSSNPVSDPFQEPERNVFDFDISVKKSLL
PEFISPVPAPEKRAHPAVVISAIIAVIVPILVLLFVWRKMNVFPLTISDG
DNAGVLLGFEACVLCHIAALVMFWVKWNIVLTWQVMGVLMIPTYYLGQKM
LLERTDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008814Swp1