Ggra7080.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7080.t1
Unique NameGgra7080.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length483
Homology
BLAST of Ggra7080.t1 vs. uniprot
Match: A0A2V3J596 (TBCC domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J596_9FLOR)

HSP 1 Score: 619 bits (1595), Expect = 4.520e-214
Identity = 380/758 (50.13%), Postives = 427/758 (56.33%), Query Frame = 0
Query:    1 MDERMDDAEPEAIGPLWIRRQVFEHSVAVPILTISKASQIDFTRLAEELLAANVVTDRSAPPAVTYDAWVAAAGLHARLDSSEDAGIIIEALETNAPDAFVRCNDPEKLAPGRQLNYRCLLIPVPELLAFLQLHALATIASRFREQADAVWPDSDQAIVPSS-SAPTSPLPLVTEGASKGNSPSLQP------------------------------------------------------------------SAIIASVQHAFQRETRLVVSNLKTLLLTIASAYGVVPTSGVSMDVLQHESGIVMGGGTVAVES-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERNPQIVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAYRSTFMTDRKDPDLTSSVATVLPPERFLPFAVPVRSSKPLQKQDSDRMQTESDNEQEGDATTRLLFSIPLPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKHAALNQTQSDSRSDRPEGKQDVSMSDSVGPSPTSQNEEQHSPQPPTKKTVFQFMVNQRFREWLTNSGRIRQLSDLVRLEEVQR 482
            MDERMDDA+PEAIGPLWIRR VFEHSVAVP LTI+KASQIDF RLAEELLAANV  DR+ PPAVTYDAWVAAAGLHARLDSSEDAGIIIEALETNAPDAFV+CN+PE LAPGRQLNYRCL IPVPELLAFL+LHA ATIASRFREQADAVWPD+DQAIV  S SAPTSP+P++++  S+  S +LQ                                                                   SAIIASVQHAFQRETRLVVSNLKTLLLTIAS+YG+VPTS +SMDV+QHESGIVMGGGTVAVES                                                                                                                                                                                                                  RNPQ+VGENRGL+FAPYNAAYSK+EL+KH+AAVGV+PD NVWDKFYRPA+RST M DRKDPDLT +VAT+LPPERFLPF VPVRSSKP +  +++ M TE + + E DA TR+LF+IP+P+PEAYQEQLD+ RSE+F FR EIRKMEKKHAALNQTQS+ R +  + K DV MSDS   SP   +EEQ     PTKKT+FQFMVNQRFREWLT+SG+IRQL+DLVRLEEVQR
Sbjct:    1 MDERMDDADPEAIGPLWIRRLVFEHSVAVPFLTIAKASQIDFARLAEELLAANVNADRATPPAVTYDAWVAAAGLHARLDSSEDAGIIIEALETNAPDAFVKCNNPENLAPGRQLNYRCLRIPVPELLAFLRLHAAATIASRFREQADAVWPDADQAIVQQSGSAPTSPMPVMSDAGSRTQSQALQSLSLSQTSSPRASPSPSPVSPRLSQSHPPSSQGXXXXXXXGPPSSPGIDGIVRKKTPTHLGSMIQSQSAIIASVQHAFQRETRLVVSNLKTLLLTIASSYGLVPTSNMSMDVVQHESGIVMGGGTVAVESGTLDRQNHHGXXXXXXXXXXXXXXXXXXXXXKNSAKSLPITRQMFEHMAFLLTTTCGPSGLYRPVSWVVPQWRDTAEPRAIPLGELVDTVTDAITRIPLLRDMDGSTDVVEIRDIDRKTILRTSIPTTNASVTGYPHAKEIRISNCSDCHFYLLASLGRVSFIACRDCTVFIGACVSASLINCVNVRLHAIARVCRVTNCFDTHLYLCTNRNPQVVGENRGLMFAPYNAAYSKSELQKHLAAVGVDPDANVWDKFYRPAFRSTSMIDRKDPDLTPAVATILPPERFLPFGVPVRSSKPTKSDENNAMPTEKETDLERDAITRMLFTIPVPIPEAYQEQLDKNRSEIFKFRAEIRKMEKKHAALNQTQSEGRGEISDNKNDVPMSDSTSLSPNPMSEEQQGNPSPTKKTLFQFMVNQRFREWLTSSGKIRQLNDLVRLEEVQR 758          
BLAST of Ggra7080.t1 vs. uniprot
Match: R7QPE1 (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPE1_CHOCR)

HSP 1 Score: 417 bits (1072), Expect = 6.720e-135
Identity = 292/791 (36.92%), Postives = 373/791 (47.16%), Query Frame = 0
Query:    5 MDDAEPEAIGPLWIRRQVFEHSVAVPILTISKASQIDFTRLAEELLAANVVTDRSAPPAVTYDAWVAAAGLHARLDSSEDAGIIIEALETNAPDAFVRCNDPEKLAPGRQLNYRCLLIPVPELLAFLQLHALATIASRFREQADAVWPDSD------------QAIVPSS-----------SAPTSPL--------------------------------------------------PLVTEGASKGNSPSLQP-------------------------SAIIASVQHAFQRETRLVVSNLKTLLLTIASAYGVVPTSGVSMDVLQHESGIVMGGGTVAVE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERNPQIVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAYRSTFMTDRKDPDLTSSVATVLPPERFLPFAVPVRSSKPLQKQDSD---RMQTESDNEQEGDATTRLLFSIPLPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKHAALNQTQSD---SRSDRPEGKQDVSMSDSVGPSPTSQNEEQ-HSPQPPTKKTVFQFMVNQRFREWLTNSGRIRQLSDLVRLEEVQ 481
            M DAEPE+IGPLWIRRQVFEHSVAVP+LT + ASQIDF +LA EL+ A+   D +  PAV+YDAWVAAAGLHA+LDSSEDAG+IIEALETNAPDAFVRCNDP KLAPGRQ++YR LLIPVPELLAF++LHA AT++SRFRE ADAVWP+++             A  PS+           ++P+SP                                                   P    GA+   SP+  P                         SAIIASVQHAFQRETRLV +NLK+LLL +ASAYGV P +   +D +  E+GIVMGGG++AVE                                                                                                                                                                                                                 + R+PQIVGENRGL+FAPYNAA++K E++ ++A +G++P  N WD FYRPA+RS    D+ DPDLTS+VA+VLPP+ FLPFAVPV   K    +D D   ++    ++ +  +A +R+LF++PLPLP+AY EQL +K SE+F  R EIR +EKKHA+++        ++ D+  G +DVSMSDS G S +   EE+  +P    KK V Q +V +RF+EWLT SGR+RQ+SDLVRL   Q
Sbjct:    1 MVDAEPESIGPLWIRRQVFEHSVAVPLLTFTTASQIDFPKLAHELVIASQTNDPNVGPAVSYDAWVAAAGLHAQLDSSEDAGVIIEALETNAPDAFVRCNDPSKLAPGRQVSYRQLLIPVPELLAFVKLHAAATLSSRFRETADAVWPEAEGGSGSVSPVGGVSAACPSNPTNARHTGSPLASPSSPQLLTPAVYXXXXXXXXRIPRTAHIAAAELPTEKLSAPVVVGTGNQPITASPPQTNSGANTPPSPNPAPPSSPVLDGIVRKKTPTQLGAIVNSQSAIIASVQHAFQRETRLVANNLKSLLLILASAYGVAPENNSPIDTVSSETGIVMGGGSIAVEHGTLSRESPQAKPRRSTSLGSSSEALMDDEASKFPARNLPITKQMFEHLAFLVTTTSGPAGSYRSIARVIPQWREWSSDVTVPLCDLTDMLTSALIRVPLQKEVDGFSDVAEIRDLDKKTILRRSIPTTNAGITDYPHAKEIRISNCSDSHFYLMSSFGRVSLIACHNCTLFVGACVSLSLINCVNMRVHVIARVCRLTNCFDTHVYLCTNRSPQIVGENRGLLFAPYNAAFAKEEVDHYLAVMGIDPKANAWDSFYRPAHRSRSAADKTDPDLTSAVASVLPPDLFLPFAVPVEKRKTPSDEDVDSKGKIHGSEEDHESDEANSRMLFAVPLPLPDAYSEQLKKKGSEVFNIRREIRAIEKKHASMSSATQQIDATQEDQNTGGKDVSMSDSAGASQSKVGEEEIEAPSVTVKKGVLQSLVQERFKEWLTQSGRMRQISDLVRLSPDQ 791          
BLAST of Ggra7080.t1 vs. uniprot
Match: A0A5J4YKS7 (TBCC domain-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKS7_PORPP)

HSP 1 Score: 71.6 bits (174), Expect = 1.470e-9
Identity = 66/226 (29.20%), Postives = 99/226 (43.81%), Query Frame = 0
Query:  255 IVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAYRSTFMTDRKDPDLTSSVATVLPPERFLPFAVPVRSSKPLQKQDSDRMQTESDNEQEGDATTRLLFSIP-LPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKHAALNQTQSDSRSDRPEGKQDVSMSDSVGPSPTSQNEEQHSPQPPTKKTVFQFMVNQRFREWLTNSGRIRQLSDLVRLEE 479
            + G+NRG+  APYNA Y     ++H   VGV  D   WD ++ PA           P+    +   L PE+FLPF VP     P  K  SD +                L+S+  +PLP+ Y+  L+ K   +   R          AA+   Q++         +D + + + G    S   + H      +    Q +V + FREWL +SG +RQ+ DLVRLE+
Sbjct:  483 MTGDNRGVYLAPYNAQYML--FKEHTKDVGVRLDRIDWDAYFTPALLDRSGIHVSSPEYARGLR--LNPEKFLPFVVPWMGDAPS-KPSSDPVAP--------------LYSLDGVPLPDDYKSALEAKTKNVEDLR----------AAMRAAQAE---------RDAAAAAAAG----SDGAQSH------RGGDIQAIVQEYFREWLVSSGNMRQIHDLVRLEQ 660          
BLAST of Ggra7080.t1 vs. uniprot
Match: A0A7S3BWF8 (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BWF8_9VIRI)

HSP 1 Score: 60.8 bits (146), Expect = 2.520e-6
Identity = 56/238 (23.53%), Postives = 89/238 (37.39%), Query Frame = 0
Query:  244 TVAVESERNPQIVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAYRSTFM---TDRKDPDLTSSVATVLPPERFLPFAVPVRSSKPLQKQDSDRMQTESDNEQEGDATTRLLFSIPLPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKHAALNQTQSDSRSDRPEGKQDVSMSDSVGPSPTSQNEEQHSPQPPTKKTVFQFMVNQRFREWLTNSGRIRQLSDLVRLE 478
            T+ + +   P  VG+NR +V AP+N  Y    L  H+ AVGV+P  N WD           +        P    +    +PP +F+PF VPV  + P                   DA+T+   + P  LP  Y   L+ K   +   R  ++                         D ++SD+                   ++   Q ++   F++WL +SG +RQ+ DL R E
Sbjct:  231 TLYLATNTPPVFVGDNRNVVVAPFNTYYPS--LRAHLEAVGVDPSVNRWDTVALLEEEGELVRAEVGHAGPGAAQAAVHAMPPNKFVPFIVPVVENGP------------GGAAANADASTQT-HTNPFVLPPEYAAALEAKVRSVAQLRGAVK-------------------------DAALSDA-------------------RRRELQGVIQAHFKDWLLHSGNMRQVFDLARQE 409          
BLAST of Ggra7080.t1 vs. uniprot
Match: A0A8J5XGN4 (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGN4_DIALT)

HSP 1 Score: 61.2 bits (147), Expect = 2.750e-6
Identity = 60/236 (25.42%), Postives = 91/236 (38.56%), Query Frame = 0
Query:  249 SERNPQIVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAYRSTFMTDRKDPDLTSSVATVLPPERFLPFAVPVRS----SKPLQKQDSDR--MQTESDNEQEGDATTRLLFSIPLPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKHAALNQTQSDSRSDRPEGKQDVSMSDSVGPSPTSQNEEQHSPQPPTKKTVFQFMVNQRFREWLTNSGRIRQLSDLVRLE 478
            + R P + GEN  +  AP+NA + +   +   A +      N+WDK   P   S       D  +  +VA++LPP+RFLPFAVP  S    S P Q   +    ++ ESD E  G+         P  LP  Y   L   +  +  F+ ++ ++                                               P  +   Q  V+ RF+EWL  SG +RQ+ DL+  E
Sbjct:  474 ANRPPILTGENHRVSLAPFNAFFPRLARDLEDARIETRLAANLWDK---PVAFSA-----PDGPVPPAVASLLPPDRFLPFAVPFESGALPSSPAQHGSAAAGLLRAESDWETAGN---------PCELPREYAAALAAAKRRLLAFQAQLGRISA---------------------------------------------PAVREEVQAAVHGRFKEWLVKSGHMRQVHDLMAFE 647          
The following BLAST results are available for this feature:
BLAST of Ggra7080.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5964.520e-21450.13TBCC domain-containing protein 1 n=1 Tax=Gracilari... [more]
R7QPE16.720e-13536.92C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A5J4YKS71.470e-929.20TBCC domain-containing protein 1 n=1 Tax=Porphyrid... [more]
A0A7S3BWF82.520e-623.53Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A8J5XGN42.750e-625.42Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..450
NoneNo IPR availablePANTHERPTHR16052:SF0TBCC DOMAIN-CONTAINING PROTEIN 1coord: 249..398
IPR039589TBCC domain-containing protein 1PANTHERPTHR16052UNCHARACTERIZEDcoord: 249..398

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:377555..379819 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7080.t1Ggra7080.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 377555..379819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7080.t1 ID=Ggra7080.t1|Name=Ggra7080.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=483bp
MDERMDDAEPEAIGPLWIRRQVFEHSVAVPILTISKASQIDFTRLAEELL
AANVVTDRSAPPAVTYDAWVAAAGLHARLDSSEDAGIIIEALETNAPDAF
VRCNDPEKLAPGRQLNYRCLLIPVPELLAFLQLHALATIASRFREQADAV
WPDSDQAIVPSSSAPTSPLPLVTEGASKGNSPSLQPSAIIASVQHAFQRE
TRLVVSNLKTLLLTIASAYGVVPTSGVSMDVLQHESGIVMGGGTVAVESE
RNPQIVGENRGLVFAPYNAAYSKAELEKHIAAVGVEPDTNVWDKFYRPAY
RSTFMTDRKDPDLTSSVATVLPPERFLPFAVPVRSSKPLQKQDSDRMQTE
SDNEQEGDATTRLLFSIPLPLPEAYQEQLDRKRSEMFTFRTEIRKMEKKH
AALNQTQSDSRSDRPEGKQDVSMSDSVGPSPTSQNEEQHSPQPPTKKTVF
QFMVNQRFREWLTNSGRIRQLSDLVRLEEVQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039589TBCC1