Ggra708.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra708.t1
Unique NameGgra708.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3J352 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J352_9FLOR)

HSP 1 Score: 174 bits (442), Expect = 5.610e-48
Identity = 87/192 (45.31%), Postives = 126/192 (65.62%), Query Frame = 0
Query:    1 MKYQDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHPVLVAYYAGDEELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRKENEGYVGPFGKGIFDCIGAGVLGSHFGLQSDRFSDYTSEIDTM 192
            MK   NPA++   R N+I IELAE ++AP+NIA++ LP+ +  I +A +AELNT G L YI+FTDIIS VP ++KG E+V  T S   LVAYYAGD+ LAD+QVW A CSGT+R + IG  FIV+ +  + +G+ LE   + Y+  + +E +   GPFGK +F+     VLG+  G   +R+S+   + + +
Sbjct:  292 MKEDSNPAIQEVLRSNQIEIELAEDAVAPSNIALLALPLVMSFIPVAFLAELNTCGVLWYIVFTDIISAVPLLIKGIELVGTTNSRQELVAYYAGDKNLADVQVWVAKCSGTNRFRNIGMSFIVIASASIIVGMVLEVCGMIYMRSKSQEGKPVEGPFGKAMFEITARSVLGTGHGEDWERYSEVMEDAEDV 483          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3IKP5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKP5_9FLOR)

HSP 1 Score: 143 bits (361), Expect = 2.990e-36
Identity = 78/184 (42.39%), Postives = 112/184 (60.87%), Query Frame = 0
Query:    1 MKYQDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRT-RSHPVLVAYYAGDEELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALE-FVALAYVDRRRKENEGYVGPFGKGIFDCIGAGVLGSHFGLQSDRF 182
            M    NPA++ + RQN + I+LAE +I P+NIAI+ LP+ ++LI +A +AEL+T   L YIIFTD+ S +PF+VKG E++N         VA+Y G +E  +I+VW A C G DR   IG  F+V+    + +G+  E F  +    RRRKE     GPFG+ +FD     +LGS  G+ +D F
Sbjct:  290 MTLDKNPAIKEALRQNTVAIDLAEDAITPSNIAILALPLTMNLIPVAFLAELSTFAMLAYIIFTDVFSTLPFLVKGVELINSVDHERRETVAFYLGTKEFGEIEVWAASCKGDDRFHAIGVAFVVIAVAAIIVGVLFEAFATMLMRRRRRKEGSEAEGPFGRVVFDITKMSLLGS--GMDADDF 471          
BLAST of Ggra708.t1 vs. uniprot
Match: R7QLA2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLA2_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 2.420e-31
Identity = 69/175 (39.43%), Postives = 109/175 (62.29%), Query Frame = 0
Query:    1 MKYQDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHP-VLVAYYAGDEELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRKENEGYV-GPFGKGIFDCIGAGVLGS 173
            M + +NPA+  + R N I ++ A+ ++  +NIAI+ LP+ + L  +A +A+LNT   L YI+FTDI S +PFM+KGFE+++   ++    VAY+AG+E L  ++VW A+C G D  +++G +F++V    M  G+ LE VA   + RRR  N+    GPFG  +F+      LGS
Sbjct:  155 MVFDENPALTEALRLNAIAVDQAKDAVTLSNIAILALPIVMTLFPVAFLADLNTFAMLCYIVFTDIFSALPFMIKGFELLDSAATNRGEAVAYHAGNETLGQMEVWAAECHGEDSFRVMGIVFVIVAAVAMVGGVLLEVVAAGVMRRRRAVNKNEASGPFGMALFEGTRYAPLGS 329          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3IKI8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI8_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 2.690e-25
Identity = 58/161 (36.02%), Postives = 98/161 (60.87%), Query Frame = 0
Query:    5 DNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHPV-LVAYYAGDEELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRR-----RKENEGYVGPFG 159
            +NPA+  + R N++ I+LA  +I P+NIA++ LPM + LI +A +AEL+T    LY++FTD+ SV+PF++KGFE+ + +      ++AYY G      I++W A C+G +  + +G  F+++      LG+ALE  A   +  R     +++   + GPFG
Sbjct:  279 ENPALTNAIRHNQVVIDLASDAIVPSNIAVLALPMVMTLIPVAFVAELSTFPTFLYVVFTDLFSVLPFVIKGFELFHSSEVRSKEMIAYYVGSRTDGKIELWVAQCTGEEGFRKVGIAFLIIALCVTTLGMALEIFAWERMKVRSQRPQQQQQHAHQGPFG 439          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3J0C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0C2_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 5.480e-21
Identity = 49/151 (32.45%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    1 MKYQDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEI-VNRTRSHPVLVAYYAGDEELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRKE 150
            M  +D  A+  + R+ +  +  AE S+ P+NIAI+ LP+ + L+   ++ +  +LG L+Y+ FTD+++V PF++KG E+ +         VAY+ GD +  +I++W A C+G    +  G +F+ +    +  GIA+EF+A     RRR +
Sbjct:   93 MVMEDVLAITTALRRKQQRVSQAEDSLVPSNIAILALPLLMALVPSTVLGDQTSLGILIYVTFTDVMNVFPFLIKGVELFMTGNMEERETVAYHVGDNQFGEIEMWAALCAGPSGFERTGAVFVAISVVLIVTGIAIEFIANRVQKRRRMQ 243          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3IMJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ0_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 1.350e-14
Identity = 48/154 (31.17%), Postives = 84/154 (54.55%), Query Frame = 0
Query:    5 DNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEI--VNRTRSHPVLVAYYAGD-------EELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRK 149
            DN AV  +  +   N+ELA  +  P+NIAI+ LP+ ++++ +ALIA++NT G L+Y + TD+++ VP  +KG E+  + +   +  +     G+       ++    ++W A+C         G I +VV   FM  G+  E VA  +V +RR+
Sbjct:  299 DNVAVELALDRGNHNVELAFDATTPSNIAILALPLAMNVVPVALIADVNTFGMLVYTLLTDVLTAVPLAIKGVEVLLIGKKVKYAAVTRISGGNLWENDQQQQGKAAEIWVAECVAEGNFITQGSILLVVALLFMVGGVVAEIVAKRWVQKRRR 452          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3ILT6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT6_9FLOR)

HSP 1 Score: 81.6 bits (200), Expect = 1.680e-14
Identity = 52/156 (33.33%), Postives = 91/156 (58.33%), Query Frame = 0
Query:    4 QDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFE--IVNRTRSHPVLVAYYAGDEELADIQ-----VWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYV-DRRRKEN 151
            Q N A++ + ++ E  +E+A  +  P+N AI+ LP+ ++LI +ALIA++NT G ++Y + TD+++VVP MVKG E  IV++ +++  ++     + E    Q     +W A C  +   + IG   +VV    M  G+  E VA+ +V  +RR+ N
Sbjct:  271 QQNLAIKLALQRGEHAVEIANDAATPSNTAILLLPLVLNLIPVALIADVNTFGMIVYTLLTDVLTVVPLMVKGVELIIVSKQKTYASIMRITGANFEPMTNQSKVAELWVARCVPSRSFRGIGEALLVVALICMVGGVLAELVAMRWVAGKRRRAN 426          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A7S1XE90 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE90_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 8.370e-14
Identity = 52/153 (33.99%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    6 NPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHPV-LVAYYAGD-EELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVA---LAYVDRRRKENEG 153
            NP V    +Q+  N EL + ++ P+NIAI+ +PM I+L+    +         L+I+ TDI++ +PF++KG E++ + RS    LVAY+ G+  E   +Q+W   C G  +  + G +F+VVG F + LG+ LE V       VD  +  ++G
Sbjct:  289 NPLVDMLLKQDNQNAELFQETLLPSNIAILAMPMVINLVPSHTVKLKTWSAIFLFILATDIVTTLPFLIKGVELITQARSASAGLVAYHVGNWGESQHLQLWLGSC-GIAKSPVPGIVFLVVGFFMLALGMFLEVVTHKRTEVVDFAKSVHKG 440          
BLAST of Ggra708.t1 vs. uniprot
Match: A0A2V3IM12 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM12_9FLOR)

HSP 1 Score: 65.5 bits (158), Expect = 6.300e-9
Identity = 40/152 (26.32%), Postives = 82/152 (53.95%), Query Frame = 0
Query:    5 DNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIAELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHPV-----LVAYYAGDE-ELADIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRKE 150
            DN AV+R+  +     + +  +++P+++ I+  P+ ++L+ +A++A+++T   LLY + +D+++V+P  +KG E+++   S  V     +     G   + A  +V+ + C        IG  F+ +   F+  G+  EF A  Y +RRRK 
Sbjct:  224 DNIAVQRAVGKAISYTQQSTEALSPSSLTILLFPLCLNLVPIAMLADVSTAKMLLYALLSDVLTVLPLAIKGIELISIGSSRYVGSVVRMTTNMNGTRAKAAAAEVYVSQCEVKRNLVAIGATFVTIALAFLVGGVLAEFAARRYKERRRKR 375          
The following BLAST results are available for this feature:
BLAST of Ggra708.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3J3525.610e-4845.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKP52.990e-3642.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLA22.420e-3139.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IKI82.690e-2536.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0C25.480e-2132.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMJ01.350e-1431.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT61.680e-1433.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XE908.370e-1433.99Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IM126.300e-926.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..214
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 56..74
NoneNo IPR availableTMHMMTMhelixcoord: 117..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000205_piloncontigtig00000205_pilon:177299..177943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra708.t1Ggra708.t1Gracilaria gracilis GNS1m malemRNAtig00000205_pilon 177299..177943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra708.t1 ID=Ggra708.t1|Name=Ggra708.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MKYQDNPAVRRSSRQNEINIELAEGSIAPANIAIITLPMFIDLISLALIA
ELNTLGYLLYIIFTDIISVVPFMVKGFEIVNRTRSHPVLVAYYAGDEELA
DIQVWTADCSGTDRCKLIGWIFIVVGTFFMFLGIALEFVALAYVDRRRKE
NEGYVGPFGKGIFDCIGAGVLGSHFGLQSDRFSDYTSEIDTMETGGEKGK
ADDGSLKRELFNRR*
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