Ggra7064.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7064.t1
Unique NameGgra7064.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length226
Homology
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A2V3J2C3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C3_9FLOR)

HSP 1 Score: 290 bits (743), Expect = 5.480e-96
Identity = 133/216 (61.57%), Postives = 169/216 (78.24%), Query Frame = 0
Query:   10 DKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            D  LI+NVL FWFG   FP +E YESQ G WYGSS++ID DIR RF R  ++A+SG LDH+I N ++  +++LALV++LDQFPRNIYR S +AFSGD KSK +++ ++ T  W  LK Y SP+ R+SFLL LMHQESL+DQD+CIEL + M+EECK+AG +AEET K LH+SL F+Q HRDIIEQFGRFPHRN  L+R ST +E+++L DGP FGQ
Sbjct:   71 DARLISNVLNFWFGKEDFPEWERYESQLGLWYGSSEEIDADIRKRFERNVEDALSGNLDHFIDNKDYPLEAELALVILLDQFPRNIYRRSGRAFSGDAKSKAIVDDMLRTKRWDELKEYFSPIVRMSFLLPLMHQESLEDQDKCIELIQRMLEECKLAGSEAEETAKQLHQSLYFSQQHRDIIEQFGRFPHRNKVLNRTSTEKEKQFLQDGPTFGQ 286          
BLAST of Ggra7064.t1 vs. uniprot
Match: R7QJL4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJL4_CHOCR)

HSP 1 Score: 201 bits (512), Expect = 3.030e-61
Identity = 95/225 (42.22%), Postives = 143/225 (63.56%), Query Frame = 0
Query:    1 MDATDTMQTDKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            M  T   Q+  EL+ +VL  WFGS     Y++ + Q   WY   K++D DIR+RFG   + A+ G+ D+ I N+E+     LA+V+MLDQ+ RNI+RGS+KA++GD K   V   ++    W   K  LS    +SFL+  MHQES+   D C++  + ++ + K AG+ A++ TK+L  +L +A  HRDI+++FGR+P+RN+ L R+STPEE ++L  GPRFGQ
Sbjct:   44 MMTTAPRQSADELVRDVLTHWFGSTEVGRYDSLDGQAKVWYEGGKEVDADIRNRFGADVESALQGEWDNLIDNSEYPITGPLAMVIMLDQYTRNIFRGSAKAYAGDEKCIEVALAIVKGSRWPRAKEQLSAPQLMSFLMPFMHQESMLHLDTCVDNVRELMNDSKAAGENADKVTKLLEANLGYAHKHRDIVQEFGRYPYRNEVLGRVSTPEELKFLDGGPRFGQ 268          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A1Y2QJU6 (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS2 TaxID=1985170 RepID=A0A1Y2QJU6_9BURK)

HSP 1 Score: 152 bits (383), Expect = 1.560e-42
Identity = 86/209 (41.15%), Postives = 117/209 (55.98%), Query Frame = 0
Query:   17 VLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            VL FWFG +    +     +K  W+GS   +D+ IR  FG    +A++G L  W     H     LAL+V+LDQF RN+ RG + AF+GD ++  +   L+  G    L   L P+ R+   + LMH E L  QDRCI   + ++ +       A +    L   L+FA+LHRDI+ +FGRFPHRN AL R ST EE  +LVDGPRFGQ
Sbjct:   15 VLDFWFGDSLVHGWPVVP-RKSLWFGSDPAVDESIRQGFGPLVAQALAGGLTDWEEPPRHR----LALLVLLDQFTRNLNRGQATAFAGDARACALALDLLDRG----LHRSLPPIGRVFVFMPLMHAEDLALQDRCIRCFEDLLADTPADHTVARDD---LASHLQFARLHRDIVLRFGRFPHRNQALGRRSTDEETAFLVDGPRFGQ 211          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A1F4JB30 (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1F4JB30_9BURK)

HSP 1 Score: 150 bits (378), Expect = 9.040e-42
Identity = 82/220 (37.27%), Postives = 116/220 (52.73%), Query Frame = 0
Query:    6 TMQTDKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            T  T   +   VL FWFG      +   + +   W+G    +D  I  RFG   + A+ G    W  + E    + LAL+V+LDQFPRN++RG  +AF+GD +++ ++   +  G    L      V R+   + LMH E LD QD C+     ++E          E    L  +L+FA LHRDII  +GRFPHRN AL R++TP EE +L +GPRFGQ
Sbjct:    8 TTPTPVSMALEVLDFWFGDALQSDWPA-DDRNALWFGGDSALDQQITERFGPLVNAALDGGCQAWEASPE----TRLALIVLLDQFPRNVFRGQPRAFAGDARAQQLVLQTLALGQDAALPR----VGRVFLYMPLMHAEHLDLQDECVSRFSALLEGA------TPELRDTLAGNLRFAHLHRDIIATYGRFPHRNAALGRVNTPAEEAFLTNGPRFGQ 212          
BLAST of Ggra7064.t1 vs. uniprot
Match: DUF924 domain-containing protein n=1 Tax=Hydrogenophaga sp. SL48 TaxID=2806347 RepID=UPI001F1E44F2 (DUF924 domain-containing protein n=1 Tax=Hydrogenophaga sp. SL48 TaxID=2806347 RepID=UPI001F1E44F2)

HSP 1 Score: 149 bits (376), Expect = 1.760e-41
Identity = 84/209 (40.19%), Postives = 114/209 (54.55%), Query Frame = 0
Query:   17 VLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            VL FWFG      + + + +   W+G     D  IR RFG   DEA+ G L  W    E      LALV++LDQF RN+YRG  +AF+GD +++ ++ H +  G        L  VAR+   + LMH ES   QD C+   + +            E    L  +L+FA+ H DI+++FGRFPHRN AL R+STPEE  +L DGPRFGQ
Sbjct:   18 VLDFWFGDGLAQDWPS-DDRNALWFGGGAGQDALIRERFGALVDEALDGGLVDW----EQRVHERLALVLLLDQFTRNVYRGQPRAFAGDGRAQRLVMHTLARGQ----NEELPRVARVFLYMPLMHAESPALQDECVLRFQAL------HRTSPPELQATLAGNLRFAEQHSDIVQRFGRFPHRNAALGRVSTPEETTFLTDGPRFGQ 211          
BLAST of Ggra7064.t1 vs. uniprot
Match: J2L501 (Uncharacterized protein n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=J2L501_9BURK)

HSP 1 Score: 149 bits (376), Expect = 1.910e-41
Identity = 89/227 (39.21%), Postives = 123/227 (54.19%), Query Frame = 0
Query:    2 DATDTMQTDKELIAN---VLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            DA  T  T+    A    VL FW G      + T +  K  W+    ++D +IR+RFG A DEA++G L  W     H     LALV++LDQF RNI+RGS++AF+GD +++ +++  +  G        L   ARL   + LMH ES   QD C+     ++ +   A KQ       L  +L +A  HRDII  FGRFP+RN  L R  TPEE+ +L+ GPRFGQ
Sbjct:    3 DAVPTSTTNTPSAATPGQVLDFWLGDGITQDWPTQDLGKR-WFSGGAELDAEIRTRFGAAVDEALAGGLRDWEQPPLHR----LALVILLDQFTRNIFRGSARAFAGDARAQQLVQQAVAAGE----DRQLPWAARLFLYMPLMHAESPALQDECVARFTRLVADAPEALKQR------LQGNLDYAHQHRDIISLFGRFPYRNAVLGRADTPEEKDFLLKGPRFGQ 214          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A6H9HQT7 (DUF924 domain-containing protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A6H9HQT7_9PROT)

HSP 1 Score: 147 bits (372), Expect = 5.560e-41
Identity = 88/220 (40.00%), Postives = 123/220 (55.91%), Query Frame = 0
Query:   12 ELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKS-KTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESL----KFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLV-DGPRFGQ 225
            E I  +L FWF +      +  +S+   W+GS   +D  IR+ FG   + A++G+LD W  + E      LAL+++LDQF RNI+RGS+ AF+GD ++ K  IE     G  GN    LSPV R+ F + L H ES   QD+ + +   +          AE  +  L E+     +FA+LHRDI+ +FGRFPHRN  L R +TPEE+ YL  D P FGQ
Sbjct:    4 EAIRRILDFWFSAAELDAPQI-DSRMERWFGSDPALDQQIRTEFGPLVERALAGELDGWATSAE----GRLALILLLDQFCRNIHRGSAMAFAGDRRALKLCIE-----GSMGNEYRTLSPVQRVFFFMPLQHAESAGVQDKSVRIYNAL----------AEGVSDTLRETFLTFAQFAELHRDIVARFGRFPHRNRVLGRSNTPEEDSYLAADAPSFGQ 203          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A1Y2R834 (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R834_9BURK)

HSP 1 Score: 147 bits (372), Expect = 7.010e-41
Identity = 82/218 (37.61%), Postives = 125/218 (57.34%), Query Frame = 0
Query:    8 QTDKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            ++D     +VL FW G      + + +++   W+    ++D DIR RFG   + AI G L  W    E   ++ L+LV++LDQFPRNI+RG  +AF+GD +++ +++  + +G    L   L+ V R+   + L+H E+L  QD  +   +      ++    A E  + L  +L FA+LHRDI+ +FGRFPHRN AL R ST EE  +L DGPRFGQ
Sbjct:    9 ESDAPNAQDVLHFWLGDGLERGWCS-DNRDDLWFAGGPKLDADIRQRFGPLVERAIDGALGDW----EAQMETRLSLVLLLDQFPRNIHRGKPRAFAGDARAQQLVQQALASG----LDRDLATVGRVFLYMPLVHAENLALQDEAVARFQ------QLRDTSAPELREKLDRNLHFAKLHRDIVLRFGRFPHRNAALGRTSTAEELAFLKDGPRFGQ 211          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A0T2YNE3 (Uncharacterized protein n=2 Tax=unclassified Hydrogenophaga TaxID=2610897 RepID=A0A0T2YNE3_9BURK)

HSP 1 Score: 145 bits (367), Expect = 3.420e-40
Identity = 79/210 (37.62%), Postives = 119/210 (56.67%), Query Frame = 0
Query:   16 NVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDGPRFGQ 225
            +VL FWFG      + + +  +  W+G S   DD IR RFG   D A+ G L  W   TE   ++ LAL+V+LDQ  RN++RG  +AF GD +++ +    +  G    +   L+P   +   + LMH E+L+ Q+ C+   + +++         E   + L  +L+FA +HRDI+ Q+GRFPHRN  L R+ TPEE+ +L DGPRFGQ
Sbjct:   12 DVLDFWFGDGLQLDWPSQDFNQR-WFGGSPAQDDAIRQRFGALVDTALDGGLTEW--ETEP--RARLALIVLLDQLSRNVHRGQRRAFDGDARAQRLSRRSLAEG----MDTTLTPAGCVFLYMPLMHAENLELQEECVARFQRLVD------TGPEPLRETLANNLRFAVVHRDIVAQYGRFPHRNAVLGRIGTPEEDEFLKDGPRFGQ 206          
BLAST of Ggra7064.t1 vs. uniprot
Match: A0A1X9N8Z6 (Uncharacterized protein n=1 Tax=Oceanicoccus sagamiensis TaxID=716816 RepID=A0A1X9N8Z6_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 7.670e-40
Identity = 85/217 (39.17%), Postives = 123/217 (56.68%), Query Frame = 0
Query:   10 DKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDDIRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSSKAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQDRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPHRNDALSRLSTPEEERYLVDG-PRFGQ 225
            +++ I ++LR+WF ++    +E     K  WY     +D  I  +FG    +A+ G+L  W    +      LALV++LDQF RNIYRGS++AF+GD  ++T+++  +  G    L   L+ V R  F + L H ES+ DQ  C+ L + ++ E   AGK        +  SL FA  HRDII QFGRFPHRN+AL R +T +E+ YL  G  RFGQ
Sbjct:   10 EQQAIDDILRYWF-ADIGAGFEVTAQHK-LWYSGGPAVDKAIERQFGGWVAQALEGELAAWQATAQ----GTLALVILLDQFTRNIYRGSAQAFAGDPLAQTLVKQGLRAG----LDSQLTAVQRSFFYMPLEHSESIADQQTCVALFEQLLGEVPAAGKAT------IQSSLDFALKHRDIIAQFGRFPHRNEALGRGTTAQEQAYLSGGGARFGQ 210          
The following BLAST results are available for this feature:
BLAST of Ggra7064.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2C35.480e-9661.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJL43.030e-6142.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1Y2QJU61.560e-4241.15Uncharacterized protein n=1 Tax=Hydrogenophaga sp.... [more]
A0A1F4JB309.040e-4237.27Uncharacterized protein n=2 Tax=Burkholderiales Ta... [more]
DUF924 domain-containing protein n=1 Tax=Hydrogenophaga sp. SL48 TaxID=2806347 RepID=UPI001F1E44F21.760e-4140.19DUF924 domain-containing protein n=1 Tax=Hydrogeno... [more]
J2L5011.910e-4139.21Uncharacterized protein n=2 Tax=unclassified Polar... [more]
A0A6H9HQT75.560e-4140.00DUF924 domain-containing protein n=2 Tax=Proteobac... [more]
A0A1Y2R8347.010e-4137.61Uncharacterized protein n=1 Tax=Hydrogenophaga sp.... [more]
A0A0T2YNE33.420e-4037.62Uncharacterized protein n=2 Tax=unclassified Hydro... [more]
A0A1X9N8Z67.670e-4039.17Uncharacterized protein n=1 Tax=Oceanicoccus sagam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 105..224
e-value: 3.2E-25
score: 90.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..219
NoneNo IPR availableGENE3D1.20.58.320coord: 8..103
e-value: 4.2E-22
score: 80.2
NoneNo IPR availablePANTHERPTHR23004:SF7TETRATRICOPEPTIDE-LIKE HELICALcoord: 32..223
NoneNo IPR availablePANTHERPTHR23004DOUBLECORTIN DOMAIN CONTAINING 2coord: 32..223
IPR010323Protein of unknown function DUF924PFAMPF06041DUF924coord: 17..219
e-value: 1.4E-51
score: 175.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:294249..294926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7064.t1Ggra7064.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 294249..294926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7064.t1 ID=Ggra7064.t1|Name=Ggra7064.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=226bp
MDATDTMQTDKELIANVLRFWFGSNTFPPYETYESQKGFWYGSSKQIDDD
IRSRFGRATDEAISGKLDHWIGNTEHGFKSDLALVVMLDQFPRNIYRGSS
KAFSGDTKSKTVIEHLIGTGGWGNLKHYLSPVARLSFLLALMHQESLDDQ
DRCIELTKGMIEECKVAGKQAEETTKILHESLKFAQLHRDIIEQFGRFPH
RNDALSRLSTPEEERYLVDGPRFGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR010323DUF924