Ggra706.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra706.t1
Unique NameGgra706.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Homology
BLAST of Ggra706.t1 vs. uniprot
Match: A0A2V3IKI8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI8_9FLOR)

HSP 1 Score: 224 bits (572), Expect = 8.940e-68
Identity = 117/206 (56.80%), Postives = 146/206 (70.87%), Query Frame = 0
Query:    1 MAADENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVAELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGTPQNGKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTDLHNARPNHDADSYQVIRERRQGPFGELMHDTGLLAQKDRYEMFGYEIGMHGLGMRRR 206
            M   ENP L NA+RHNQV+ID+AS AIVPS +A++A PMVMTLIP AFVAELST  TFLYV+FTD  S+LPFVI+GFEL++S  +   +M+AY++G+  +GKIELWVA+CTG EGF+KV IAFL IA CVT LG  LEI+AW RM+   + + RP       Q  +   QGPFG L+ DTG LA ++  +    E  M GLG R R
Sbjct:  275 MTPSENPALTNAIRHNQVVIDLASDAIVPSNIAVLALPMVMTLIPVAFVAELSTFPTFLYVVFTDLFSVLPFVIKGFELFHSSEVRSKEMIAYYVGSRTDGKIELWVAQCTGEEGFRKVGIAFLIIALCVTTLGMALEIFAWERMK---VRSQRPQ------QQQQHAHQGPFGALLQDTGFLAHREFEQSHYDEFEMRGLGARMR 471          
BLAST of Ggra706.t1 vs. uniprot
Match: R7QLA2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLA2_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 1.870e-31
Identity = 69/174 (39.66%), Postives = 96/174 (55.17%), Query Frame = 0
Query:    1 MAADENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVAELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGTPQNGKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTDLHNARPNHDADSYQVIRERRQGPFG 174
            M  DENP L  ALR N + +D A  A+  S +AI+A P+VMTL P AF+A+L+T A   Y++FTD  S LPF+I+GFEL +S   +R + VAYH G    G++E+W A C G + F+ + I F+ +A      G +LE+ A   MR     N           +    R  P G
Sbjct:  155 MVFDENPALTEALRLNAIAVDQAKDAVTLSNIAILALPIVMTLFPVAFLADLNTFAMLCYIVFTDIFSALPFMIKGFELLDSAATNRGEAVAYHAGNETLGQMEVWAAECHGEDSFRVMGIVFVIVAAVAMVGGVLLEVVAAGVMRRRRAVNKNEASGPFGMALFEGTRYAPLG 328          
BLAST of Ggra706.t1 vs. uniprot
Match: A0A2V3J4D7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D7_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 4.800e-31
Identity = 75/203 (36.95%), Postives = 112/203 (55.17%), Query Frame = 0
Query:    1 MAADENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVAELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGTPQNGKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTDLHNARPNHDADSYQVIRERRQGPFGELMHD--------TGLLAQKDRYEMFGYE 195
            M  D+NP ++ A   N + ID+A  +IVPS VA++A PM M+LIP AFVAEL  L T LYV+FTD ++++PF+I+G EL ++   S N +VAY+ G  +   +++WVA C G+  F+ + +AF+ IA      G +LE+ A   M+    ++  P               GPFG  M D        TG     +RY +  +E
Sbjct:  287 MQDDDNPAIRKATEQNTIEIDLAEDSIVPSNVALLALPMFMSLIPVAFVAELGALGTVLYVIFTDVVAVIPFLIKGIELLSTTQ-SHNSLVAYYAGDEKLADLQVWVAECRGTAKFKYIGLAFVIIALAAIVTGVLLEVQAMKYMQKRRGNSELPV-------------AGPFGRAMFDSTAEGLLGTGFAEIWERYSIASFE 475          
BLAST of Ggra706.t1 vs. uniprot
Match: A0A2V3J352 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J352_9FLOR)

HSP 1 Score: 119 bits (299), Expect = 7.290e-28
Identity = 63/179 (35.20%), Postives = 106/179 (59.22%), Query Frame = 0
Query:    1 MAADENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVAELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGTPQNGKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTDLHNARPNHDADSYQVIRERRQGPFGELMHD 179
            M  D NP ++  LR NQ+ I++A  A+ PS +A++A P+VM+ IP AF+AEL+T     Y++FTD +S +P +I+G EL  + + SR ++VAY+ G      +++WVA+C+G+  F+ + ++F+ IA+    +G VLE+     MR+      +P              +GPFG+ M +
Sbjct:  292 MKEDSNPAIQEVLRSNQIEIELAEDAVAPSNIALLALPLVMSFIPVAFLAELNTCGVLWYIVFTDIISAVPLLIKGIELVGTTN-SRQELVAYYAGDKNLADVQVWVAKCSGTNRFRNIGMSFIVIASASIIVGMVLEVCGMIYMRSKS-QEGKPV-------------EGPFGKAMFE 455          
BLAST of Ggra706.t1 vs. uniprot
Match: A0A7S1XE90 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XE90_9RHOD)

HSP 1 Score: 75.1 bits (183), Expect = 2.730e-12
Identity = 46/146 (31.51%), Postives = 78/146 (53.42%), Query Frame = 0
Query:    5 ENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVAELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGT-PQNGKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTD 149
            +NP++   L+ +    ++    ++PS +AI+A PMV+ L+P+  V   +  A FL++L TD ++ LPF+I+G EL      +   +VAYH+G   ++  ++LW+  C G        I FL +   + ALG  LE+    R    D
Sbjct:  288 QNPLVDMLLKQDNQNAELFQETLLPSNIAILAMPMVINLVPSHTVKLKTWSAIFLFILATDIVTTLPFLIKGVELITQARSASAGLVAYHVGNWGESQHLQLWLGSC-GIAKSPVPGIVFLVVGFFMLALGMFLEVVTHKRTEVVD 432          
The following BLAST results are available for this feature:
BLAST of Ggra706.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IKI88.940e-6856.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLA21.870e-3139.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J4D74.800e-3136.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3527.290e-2835.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XE902.730e-1231.51Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..77
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000205_piloncontigtig00000205_pilon:168561..169181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra706.t1Ggra706.t1Gracilaria gracilis GNS1m malemRNAtig00000205_pilon 168561..169181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra706.t1 ID=Ggra706.t1|Name=Ggra706.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MAADENPVLKNALRHNQVIIDMASGAIVPSKVAIIAPPMVMTLIPAAFVA
ELSTLATFLYVLFTDFLSILPFVIQGFELYNSVHISRNDMVAYHIGTPQN
GKIELWVARCTGSEGFQKVDIAFLDIATCVTALGFVLEIYAWNRMRNTDL
HNARPNHDADSYQVIRERRQGPFGELMHDTGLLAQKDRYEMFGYEIGMHG
LGMRRR*
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