Ggra7025.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7025.t1
Unique NameGgra7025.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length577
Homology
BLAST of Ggra7025.t1 vs. uniprot
Match: A0A2V3J3B6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3B6_9FLOR)

HSP 1 Score: 530 bits (1366), Expect = 4.070e-180
Identity = 308/611 (50.41%), Postives = 391/611 (63.99%), Query Frame = 0
Query:    1 MSEEDT-PDNSLVAAALELPMSHYLQWSRYEQVADALAHFKTEREIRKTGRLDLVTWVQYICGFGYQGPSEFAWAQLFSACRVLPSLGPGRNFLREHEIAVLLAYAKITSDHGDSMTPAQLVKHRIKPAVLGRSVARTPGILYHIHQKFENWALGPFTDSYCAMCVSQFCPEPLTSRNLLASSIGNLSDIGDNIRQSANTHTNATLKTWGTVMTSILDLDISNKSARMRRFEAKLLEKRRFIYQQIYVKITDHWLRSTTRPGLQSPFDHSEQSDC-----------TPQSSPVND--FTPKS-PELDVCEPQGKVAVSSPSR----IGIPSWSVVVTEVIVCQLHRSSRYGQAALDFVPCSPPN--------VNYAQDSSPFALPKTYLRIGSSNPPSLSTEVSGISMSPACRGLSLRLKVGVHPPRRGSDRPRFEIIGIDSVNWVELSPEQNKCYSHDVVR-KNRNLSADSVYMAENAGCRSQTLDLSEGMRKLEINITVPSRLLQRVRMETRISEESGGD--------------SMMTKIEDFGHTMSTYVSCASLDLELPFD-----DDGCESFKEQCWIDWRTDAVVTYFT-PTEGDLYAVTAAKTD 563
            M+++DT PD+SLVAAALE PMSHYLQW  ++QVA ALA FKTEREIRKTGRLDLVTWVQYICGFGY GPS+ AWA+LFSACRV+P++ PGR +LR HEIAVLLAYAKI  D+GD+MTPAQLVKHRIKPAVLGRSVARTPGILYHI QKF+ WALGPFTD++C +CV    P+P+ + +  ++++  LS +G+ IR SA  HTN+ LK+W +V+TSIL+LD+S KSAR+ RF+ +L EKRRFIYQQ+YVKI++ WL       L +   +++               TP     N+   +PKS P++D+C P+     S+ S+      +  WS+V  EVIVC+LHR SRYGQAALDFVP   P             Q+       KTYLRIG +    L TEVSGI +S ACRGL L +K+ V  P  GS RPRFE++ I +  WVELS E +KC           N +  + ++    G R +  DL++ +RK E+ I VP RLLQ VRME  I                     S + K ++ G   S   SC S+D+E   +     +DG E F E CWI+W T AVVTY T P  G++ A TA KTD
Sbjct:    1 MNDDDTLPDSSLVAAALEQPMSHYLQWIHHDQVAPALAMFKTEREIRKTGRLDLVTWVQYICGFGYPGPSDDAWARLFSACRVMPTIQPGRAYLRVHEIAVLLAYAKIRPDNGDTMTPAQLVKHRIKPAVLGRSVARTPGILYHIQQKFDKWALGPFTDTFCTLCVDLCRPQPVVTADNPSAAV--LSYVGETIRHSAVAHTNSLLKSWASVVTSILELDVSTKSARVARFQQRLDEKRRFIYQQMYVKISEQWLCPAVTESLSTSDQYTQXXXXXXXXXXXXXXYTPVGGVNNNPLLSPKSLPDIDMCAPRLSSMQSTISQRKAATTMSEWSIVTAEVIVCELHRPSRYGQAALDFVPSEAPGRAPHTTGEFCGQQELRVVESCKTYLRIGLTKAAKLCTEVSGIPLSHACRGLKLGIKLKVGAPDMGSARPRFEMMEITNCAWVELSGEMDKCSKRMCEGGSGSNGTGGAEWLVGGGGMRRERFDLNKAVRKHEMVIRVPGRLLQCVRMEGGIGPXXXXXXXXXXXXXXXXXRWSGIVKADEDGANSS---SCWSMDMESGVEIGERCEDG-ERFTEACWIEWHTGAVVTYVTAPVGGEVLAATAVKTD 605          
BLAST of Ggra7025.t1 vs. uniprot
Match: R7Q733 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q733_CHOCR)

HSP 1 Score: 449 bits (1156), Expect = 2.450e-148
Identity = 264/609 (43.35%), Postives = 344/609 (56.49%), Query Frame = 0
Query:    8 DNSLVAAALELPMSHYLQWSRYEQVADALAHFKTEREIRKTGRLDLVTWVQYICGFGYQGPSEFAWAQLFSACRVLPSLGPGRNFLREHEIAVLLAYAKITSDHGDSMTPAQLVKHRIKPAVLGRSVARTPGILYHIHQKFENWALGPFTDSYCAMCVSQFCPEPLTSRNLLASSIGNLSDIGDNIRQSANTHTNATLKTWGTVMTSILDLDISNKSARMRRFEAKLLEKRRFIYQQIYVKITDHWLRSTTRPGL----QSPFDHSEQSDCTPQSSPVNDFTPK--SPELDVCEPQGKVAVSSPSRIGIPSWSVVVTEVIVCQLHRSSRYGQAALDFVPCSPPNVNYAQDSSP-----FALPKTYLRIGSSNPPSLSTEVSGISMSPACRGLSLRLKVGVHPPRRGSDRPRFEIIGIDSVNWVELSPEQNKCYSHDVV----------------------RKNRNLSADSV--YMAENAGCRSQTLDLSEGMRKLEINITVPSRLLQRVRMETRISEESGGDSMMTKIEDFGHTMSTYVS-CASLD----LELPFDDDGCESFKEQCWIDWRTDAVVTYFTPTEGDLYAVTAAKTDMLHFPVDGRSGTP 576
            D  LVAAALE P SHY   +    VA ALA F +ER+IRKTGRLDLVTWVQYICGFGY GP++ AWA+LF+ACRVLP L    + LREHEIAVLLAYAKI  D+GD+MT AQLVKHRIKPAVLGR+VARTPGIL HIH KFENWALGPF+D +C+ CVS F P        +     N SDIGD+IR+ A+ H N  LKTW  V+ +ILD++ +  S R  RFE KL EKR+F+YQ I++KI++HW   T    L    +    + EQ     + + V+   P    P+  +C+   +V      R  IP W  VV+ + +C+LH+ S YGQA L+F+       +  +  SP     F   +T +RIGS N   +  EV G+  S  CR L L L VGV PPR GS RPRFE+ GI S  WVELS E++ C   + V                      R  R   +  +  Y++   GC  +T DL EGM K  + +TVP  + +RVR + R  E    + M     +     ST  S C+ +D     E+  D  G ++++E  WID    A +TY  P   +L+A T     +       ++ TP
Sbjct:   11 DAVLVAAALERPHSHYAACAEQPDVAKALAQFSSERDIRKTGRLDLVTWVQYICGFGYPGPTDEAWAKLFAACRVLPMLATDSDVLREHEIAVLLAYAKIKPDNGDTMTSAQLVKHRIKPAVLGRTVARTPGILQHIHVKFENWALGPFSDMFCSYCVSLFGPSAYMPG--IDDLPFNQSDIGDSIRECADAHANTNLKTWANVICNILDIEPNTNSPRAERFELKLHEKRKFMYQHIFIKISEHWFNLTQSRALIPQDRDSLHYREQPRA--KKAKVDKLLPVRGKPDTQLCQFIKRVISVPTGRRTIPPWMTVVSHITICELHKPSTYGQAGLEFLQSDEVQTDLVKLVSPEQGCGFTPSRTNVRIGSFNSGLIGAEVCGVPPSQMCRALRLELTVGVLPPRAGSTRPRFEVTGIKSATWVELSAEEDSCEVCEPVSETMGEEAGQEEEAGTKTNTGDRLERWFGSSGIGKYLSLGDGCHWETYDLCEGMTKHVMRVTVPEDMGRRVRAKARTGEWVQRNVMQAYERERWSEESTVASECSGVDSSSSAEMEVDSGGAKTYEEPVWIDCHAAAKLTYIAPPGVELFAATPKDNSIFKNSPYWKARTP 615          
The following BLAST results are available for this feature:
BLAST of Ggra7025.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3B64.070e-18050.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7332.450e-14843.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:93001..94731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7025.t1Ggra7025.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 93001..94731 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7025.t1 ID=Ggra7025.t1|Name=Ggra7025.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=577bp
MSEEDTPDNSLVAAALELPMSHYLQWSRYEQVADALAHFKTEREIRKTGR
LDLVTWVQYICGFGYQGPSEFAWAQLFSACRVLPSLGPGRNFLREHEIAV
LLAYAKITSDHGDSMTPAQLVKHRIKPAVLGRSVARTPGILYHIHQKFEN
WALGPFTDSYCAMCVSQFCPEPLTSRNLLASSIGNLSDIGDNIRQSANTH
TNATLKTWGTVMTSILDLDISNKSARMRRFEAKLLEKRRFIYQQIYVKIT
DHWLRSTTRPGLQSPFDHSEQSDCTPQSSPVNDFTPKSPELDVCEPQGKV
AVSSPSRIGIPSWSVVVTEVIVCQLHRSSRYGQAALDFVPCSPPNVNYAQ
DSSPFALPKTYLRIGSSNPPSLSTEVSGISMSPACRGLSLRLKVGVHPPR
RGSDRPRFEIIGIDSVNWVELSPEQNKCYSHDVVRKNRNLSADSVYMAEN
AGCRSQTLDLSEGMRKLEINITVPSRLLQRVRMETRISEESGGDSMMTKI
EDFGHTMSTYVSCASLDLELPFDDDGCESFKEQCWIDWRTDAVVTYFTPT
EGDLYAVTAAKTDMLHFPVDGRSGTP*
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