Ggra7021.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7021.t1
Unique NameGgra7021.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length290
Homology
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A2V3J2B5 (Mannose-P-dolichol utilization defect 1 protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B5_9FLOR)

HSP 1 Score: 320 bits (821), Expect = 9.250e-107
Identity = 170/214 (79.44%), Postives = 188/214 (87.85%), Query Frame = 0
Query:   71 SRVLTLLSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRYSRVLSKVAETVPNP 284
            +R+L +LSTIVGVCVLIGSVLYKIPQ+VRV+RRRSAAGISVLMY LET+GTTFSAVYCARR +PFSTYGE VFIM+QN +IL+LIVFFERLPRVPA   AL+YVL ++CLYS +VPM I T LQVCSIPILNLAR+PQI+LN R KSTGELAPITLGLQLLGN ARIFTTIAQVRDPLMLT IAV TCFNT LFAQW +YSRVL      +PNP
Sbjct:   71 NRLLIVLSTIVGVCVLIGSVLYKIPQIVRVLRRRSAAGISVLMYILETVGTTFSAVYCARRHIPFSTYGESVFIMVQNALILMLIVFFERLPRVPAVCSALVYVLCLLCLYSSLVPMRIITVLQVCSIPILNLARVPQILLNLRSKSTGELAPITLGLQLLGNVARIFTTIAQVRDPLMLTAIAVATCFNTTLFAQWFKYSRVLPTRVNPIPNP 284          
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A7S2ZV02 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZV02_9RHOD)

HSP 1 Score: 191 bits (485), Expect = 2.610e-56
Identity = 102/194 (52.58%), Postives = 132/194 (68.04%), Query Frame = 0
Query:   77 LSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRY 270
            LS ++G   L GS+LYK+PQV RV R +   GISV   SLET+GT+ S VY  R   PFSTYGE +FI +QN  I+ L++FFER P  P  +  LLY++ +V L  P   M+I  FL VC+ PI+ ++++PQ++LN++ KSTG+LAPITLGLQLLGN ARIFTTI QVRDP++  G       N  LF QW  Y
Sbjct:   60 LSIVIGYATLAGSLLYKVPQVARVARNQRGDGISVSGLSLETLGTSLSCVYSTRNRFPFSTYGESLFIPVQNLAIMALVIFFERAPAKPWILWLLLYIICLVTLMIPGTSMTIVAFLNVCATPIMYVSKIPQLLLNFQTKSTGQLAPITLGLQLLGNVARIFTTIVQVRDPIVFLGFISAFFMNGALFLQWWIY 253          
BLAST of Ggra7021.t1 vs. uniprot
Match: K8YU69 (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU69_NANGC)

HSP 1 Score: 162 bits (411), Expect = 2.380e-45
Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 0
Query:   74 LTLLSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLALLYV-LAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRY 270
            LTLLS   G  V+ GS+L+K+PQ  R+ R++SAAG+S  MY LETIG   S  +  R   PFSTYGE VFI++QN VI+  I  +   P  P   L+LL   L      SP+ PM + + LQ  SIP+LN +R+PQ++LN+R KSTGELAP TL LQ +GN ARIFTT+ Q+++ L L        FN  L AQ+  Y
Sbjct:   46 LTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 243          
BLAST of Ggra7021.t1 vs. uniprot
Match: W7TT95 (Cystinosin/ERS1p repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT95_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.740e-44
Identity = 96/198 (48.48%), Postives = 125/198 (63.13%), Query Frame = 0
Query:   74 LTLLSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLALLYV-LAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRY 270
            LTLLS   G  V+ GS+L+K+PQ  R+ R++SAAG+S  MY LETIG   S  +  R   PFSTYGE VFI++QN VI+  I  +   P  P   L+LL   L      SP+ PM + + LQ  SIP+LN +R+PQ++LN+R KSTGELAP TL LQ +GN ARIFTT+ Q+++ L L        FN  L AQ+  Y
Sbjct:  163 LTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360          
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A5J4Z522 (Mannose-P-dolichol utilization defect 1 protein-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z522_PORPP)

HSP 1 Score: 145 bits (366), Expect = 4.170e-38
Identity = 86/198 (43.43%), Postives = 127/198 (64.14%), Query Frame = 0
Query:   77 LSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLA-LLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRYSRV 273
            LS +VGV VL+GSV+YK+PQV+R+++ +S  GIS      ET+G  FS+VY  R   PF TYGE +FI +QN +IL L+  +    +     LA +L   +  CL +P+VP ++T  LQ+ SIP+ NL+RLPQI +++R KSTG+L+  T+ L + GN AR+FTT  QV+D  +L         N+V+  Q I Y+++
Sbjct:   93 LSRVVGVAVLLGSVMYKVPQVLRIVKSKSTDGISTSALVYETLGMLFSSVYNVRSGFPFETYGELIFITLQNILILWLMRAYAPPEKKRRAALAPILIGTSFPCLMAPVVPFALTRTLQLLSIPLGNLSRLPQIWMSFRSKSTGQLSVATVALTVAGNVARLFTTAVQVKDAFVLMSSLCAFALNSVVLTQCILYNKM 290          
BLAST of Ggra7021.t1 vs. uniprot
Match: M2X213 (Lysosomal cysteine transporter, LCT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X213_GALSU)

HSP 1 Score: 144 bits (362), Expect = 8.540e-38
Identity = 84/203 (41.38%), Postives = 129/203 (63.55%), Query Frame = 0
Query:   78 STIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVI-LILIVFFERLP---RVPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRYSRVLSK 276
            S+++G  V+  S  YK+PQ+ R+I ++S+ GIS+ MY LE+IG  FS  YC +   P+ T+ E + I +QN +I L L  + ER     R   + L  L   +++C+  PI  + +   LQVCS P++N++++PQI+ N R +STGEL+PITL  QL GN AR+FTTI Q+R+   LT I+++   N +L  Q+IRY   ++K
Sbjct:   64 SSLIGYVVIFCSTFYKVPQIARIITKKSSKGISLSMYVLESIGIYFSLCYCIQAKFPWETFAESICIFVQNIIITLFLYKYTERKDGRNRNLVYALIPLMGASLLCIRLPIHWLQL---LQVCSSPLMNISKIPQILRNERNQSTGELSPITLSFQLAGNVARVFTTIVQLRNRWFLTSISISLILNAILGLQYIRYRFSITK 263          
BLAST of Ggra7021.t1 vs. uniprot
Match: M1VL43 (Similar to mannose-P-dolichol utilization defect 1 protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VL43_CYAM1)

HSP 1 Score: 144 bits (362), Expect = 1.510e-37
Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 0
Query:   74 LTLLSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPR--VPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRD--PLMLTGIAVNTCFNTVLFAQWIRY 270
            L LLS ++G  V+IGS LYK+PQVVR++R RSA GISV  Y  ET+ T  S  Y  R+  PF T+GE  FI+IQN +IL+L+  F+  PR      +L  + +L  V L   + P  + T  Q  SIP+LNL+R+PQI++N + ++TGEL+  T+ LQLLGN AR+FTT+ ++    P +L+ I V    N++L  Q+ R+
Sbjct:   96 LGLLSQVLGWLVIIGSSLYKVPQVVRILRVRSAKGISVTTYVCETVSTACSFCYALRQRFPFDTFGESGFILIQNVMILVLMSHFDARPRRWATLAILGSITLLMGVLLSPRLAPPVVVTVAQAVSIPLLNLSRIPQIVMNAQLRTTGELSITTMLLQLLGNAARLFTTLVRLDGNLPYLLSAI-VALALNSILVYQYFRF 295          
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A2H3CG66 (Mannose-P-dolichol utilization defect 1 protein n=3 Tax=Armillaria TaxID=47424 RepID=A0A2H3CG66_ARMGA)

HSP 1 Score: 133 bits (335), Expect = 1.510e-33
Identity = 82/223 (36.77%), Postives = 128/223 (57.40%), Query Frame = 0
Query:   77 LSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPR---------VPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQ-WIRYSRVLSKVAETVPNPEPHRV 289
            LS  VG+ +++G  + K+PQ++ V++ RSA G+S+  Y LET+    + +Y  R   PFSTYGE +F+ IQN +I  LIVF+   P+         + AF+  L Y+           P  I ++LQ+ ++P+   A++PQI  N++ KSTG+L+   +  Q+LG  AR+FTT+ +V DP++L G A+    N+VL AQ W+ +      V E VP P    V
Sbjct:   44 LSKGVGLGIVVGGSIVKVPQIILVVKSRSAQGLSLGTYVLETLSYCITLLYSLRNDFPFSTYGENLFLTIQNALITQLIVFYSPNPQGKITLISAGLTAFISTLYYL-----------PTEILSYLQIATLPLSLFAKIPQITQNYQSKSTGQLSAFAVIAQVLGCIARLFTTMQEVGDPVVLAGFALALVLNSVLGAQLWMYWGAQAKTVEEKVPEPAKEEV 255          
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A1U7LLR6 (Mannose-P-dolichol utilization defect 1 protein (Fragment) n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LLR6_NEOID)

HSP 1 Score: 130 bits (328), Expect = 4.110e-33
Identity = 83/195 (42.56%), Postives = 123/195 (63.08%), Query Frame = 0
Query:   77 LSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFVLALLYVLAVVCLYSPIVPMSIT-TFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRY 270
            +S ++GV +++G  + K+PQ+V ++  +S  G+SV+ Y LET  T  S VY AR+   FSTYGEG+FI IQN +I +LI++F R  R  A V  L+ ++ V C YS     S T   LQ  +IP+  L+++PQI  N+++KSTG+L+   +   LLG+ AR+FTTI +V DPL+L G  +    N VL  Q + Y
Sbjct:   37 ISKVLGVGIVLGGAIVKLPQLVTLLSSQSGHGVSVIAYILETAATIISLVYSARQGFSFSTYGEGLFISIQNILITLLIMYFAR--RRAALV-GLIGLIIVGC-YSLFTTSSSTLAILQALTIPLNLLSKVPQIASNFKKKSTGQLSAFAVFNYLLGSLARVFTTITEVSDPLVLWGYVLAVVLNAVLVIQMVIY 227          
BLAST of Ggra7021.t1 vs. uniprot
Match: A0A109FIC5 (Mannose-P-dolichol utilization defect 1 protein (Fragment) n=1 Tax=Rhodotorula sp. JG-1b TaxID=1305733 RepID=A0A109FIC5_9BASI)

HSP 1 Score: 128 bits (321), Expect = 4.110e-32
Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 0
Query:   77 LSTIVGVCVLIGSVLYKIPQVVRVIRRRSAAGISVLMYSLETIGT--TFSAVYCARRTMPFSTYGEGVFIMIQNFVILILIVFFERLPRVPAFV--LALLYVLAVVCLYSPIVPMSITTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTVLFAQWIRY 270
            LS ++G+ ++ G  + K+PQ++ V+R  SA G+S+  Y L+T+ T  T S  Y  R   PFSTYGE  F++ QN V+++LI  +   P +P  V  +ALL  LA       +VP S  +FLQ  +IPI   +++PQI+ N++ KSTG+L+   +   L G  AR+FTT+++ +DPL+L   A+    N V+FAQ I Y
Sbjct:   44 LSKVLGLGMVAGGAILKLPQILTVVRSGSARGLSLSSYILDTVATGITASVAYNVRNGFPFSTYGEMGFLLAQNAVLIVLITSYSARPTLPRLVPLVALLGSLAYALASPSLVPASTLSFLQTLTIPISLSSKVPQIVENYKAKSTGQLSAFLVINSLAGCLARVFTTMSETKDPLLLWNFALAALLNGVIFAQMIVY 241          
The following BLAST results are available for this feature:
BLAST of Ggra7021.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2B59.250e-10779.44Mannose-P-dolichol utilization defect 1 protein n=... [more]
A0A7S2ZV022.610e-5652.58Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
K8YU692.380e-4548.48Mannose-P-dolichol utilization defect 1 protein ho... [more]
W7TT954.740e-4448.48Cystinosin/ERS1p repeat containing protein n=2 Tax... [more]
A0A5J4Z5224.170e-3843.43Mannose-P-dolichol utilization defect 1 protein-li... [more]
M2X2138.540e-3841.38Lysosomal cysteine transporter, LCT family n=1 Tax... [more]
M1VL431.510e-3744.78Similar to mannose-P-dolichol utilization defect 1... [more]
A0A2H3CG661.510e-3336.77Mannose-P-dolichol utilization defect 1 protein n=... [more]
A0A1U7LLR64.110e-3342.56Mannose-P-dolichol utilization defect 1 protein (F... [more]
A0A109FIC54.110e-3239.90Mannose-P-dolichol utilization defect 1 protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatSMARTSM00679ctnscoord: 203..234
e-value: 1.8E-4
score: 30.8
coord: 91..122
e-value: 0.14
score: 21.3
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 77..130
e-value: 6.2E-11
score: 41.9
coord: 191..247
e-value: 8.7E-14
score: 51.0
NoneNo IPR availableGENE3D1.20.1280.290coord: 71..158
e-value: 4.6E-9
score: 38.3
NoneNo IPR availableGENE3D1.20.1280.290coord: 187..279
e-value: 3.3E-9
score: 38.7
NoneNo IPR availablePANTHERPTHR12226:SF2MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEINcoord: 73..272
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..137
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 60..69
NoneNo IPR availableTMHMMTMhelixcoord: 166..185
NoneNo IPR availableTMHMMTMhelixcoord: 73..92
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
IPR016817Mannose-P-dolichol utilization defect 1 proteinPANTHERPTHR12226MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATEDcoord: 73..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:76572..77441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7021.t1Ggra7021.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 76572..77441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7021.t1 ID=Ggra7021.t1|Name=Ggra7021.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=290bp
MAFVSPLPGALCVAAPRRAPLQRWRPLRVCGRRAQLRADARHRACARIVA
PRALAHTAPPPPPPPPPPPPSRVLTLLSTIVGVCVLIGSVLYKIPQVVRV
IRRRSAAGISVLMYSLETIGTTFSAVYCARRTMPFSTYGEGVFIMIQNFV
ILILIVFFERLPRVPAFVLALLYVLAVVCLYSPIVPMSITTFLQVCSIPI
LNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLML
TGIAVNTCFNTVLFAQWIRYSRVLSKVAETVPNPEPHRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt
IPR016817MannP-dilichol_defect-1