Ggra7020.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7020.t1
Unique NameGgra7020.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length754
Homology
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A2V3J2Z5 (ATP-dependent RNA helicase dbp9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z5_9FLOR)

HSP 1 Score: 870 bits (2249), Expect = 2.640e-308
Identity = 445/587 (75.81%), Postives = 510/587 (86.88%), Query Frame = 0
Query:  166 NIEKAPSPIKIFTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTASVAQGLRAVVLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTFTTNGVSGSARERYRAKHGIKKRKSRDDGQTMLKKRRR 752
            ++EK P+PIK FTEMGLDPRL+RAIE+M W KPTPIQSAVIPAALHGRDVLVS+PTGSGKTAAYA+P+VQHICK+ S   GLRAVVLVPTRELVHQVASVLK LCKY+DGI + ALTGS++    K+G +K G+   F  +AD++VGTPAA++S   +     LS VEFVVVDEADLVLSYGYE DA+ ALS+VP+SAQSMLLSATLEAEGMD+FKKVILRRPL IKI++ + +QE++S+ A HYYA+LKIHRDRYLV YA+LRLNVITGKVLIFVNHI+TAFRLKLFLDQFKVKSAVLNSELP NSRVHCV+QFNAGVFDILIA+DE+   +   E   G           KDSEFGLSRG+DFRDVAAVFNFDVP+TA SY+HRAGRTARAGK+GTVLTLIC D+EEE +KS GKEGGCHIAPLAFRMDQIEAFRYRVEDA R+VTDA +HGARLADVRREIVNSEQLK+YFE+NP+DLDALQHNLTLAKNIP+HLAHIP+YL+PPALRG+VSNEP G++FR KRR+R  R +  GN+ K+GDPLKTFTT+G+SGSAR+RYR KHGIKKRK RD GQTM+KKRRR
Sbjct:  201 HVEKPPAPIKTFTEMGLDPRLERAIEKMDWLKPTPIQSAVIPAALHGRDVLVSAPTGSGKTAAYAIPIVQHICKSDSDVNGLRAVVLVPTRELVHQVASVLKGLCKYVDGIQVAALTGSFTGGLEKNGRRKKGNGLTFGQAADIVVGTPAAVISGKNSQEGTNLSKVEFVVVDEADLVLSYGYENDAKTALSRVPVSAQSMLLSATLEAEGMDRFKKVILRRPLIIKITSDEGVQEDDSSRALHYYAKLKIHRDRYLVTYAMLRLNVITGKVLIFVNHINTAFRLKLFLDQFKVKSAVLNSELPVNSRVHCVEQFNAGVFDILIASDESNAGDSGKESSGGKKETRSRKRMRKDSEFGLSRGMDFRDVAAVFNFDVPETAASYMHRAGRTARAGKAGTVLTLICNDKEEERLKSSGKEGGCHIAPLAFRMDQIEAFRYRVEDALRMVTDAVIHGARLADVRREIVNSEQLKDYFEDNPDDLDALQHNLTLAKNIPEHLAHIPSYLIPPALRGNVSNEPTGSRFRGKRRRRVKRGNGAGNQRKKGDPLKTFTTDGLSGSARQRYRTKHGIKKRKGRDPGQTMVKKRRR 787          
BLAST of Ggra7020.t1 vs. uniprot
Match: R7Q612 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q612_CHOCR)

HSP 1 Score: 729 bits (1881), Expect = 2.970e-253
Identity = 380/598 (63.55%), Postives = 473/598 (79.10%), Query Frame = 0
Query:  169 KAPSPIKIFTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTASVAQ-GLRAVVLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDG-----------DKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXK---DSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTFTTNGVSGSARERYRAKHGIKKRKSRDDGQTMLKKRR 751
            +AP  +  F EM LDPR++RAIER+ WRKPTP+QSAV+PAAL GRDVLVS+PTGSGKT AYA+P+VQHIC+  S+ + G + VVLVPTRELVHQV  VLK+LC+YI G+ + A+      N  K+   K G           +   F  SAD++VGTPA+IV+AAGT  ++ LS V+FVVVDEADLVLSYGYE DA+AAL+K+P +AQSMLLSATLEA+GM  F+KV+LRRPLTIK++    +++ +  GA+HY+ARLK H+DRYLVAYA+LRLNV+ GKVL+FVNH+++AFRLKLFLDQFKVKSAVLNSELP NSR+HCV QFNAGVFDILIATDE++D+E    K+             K   D EFGLSRGVDF+DVAAVFNFDVP+T  SY HRAGRTARAG+SGTV++L+C D+++  V  MG+E G HI PLAFRMDQIEAFRYRVED  R+VTDAAV+GARLADV+REIVNSE L++YFE+NP+DLDAL+H L+LAKNIP+HLAHIP+YLLP ALRGSV+ +P G+KFRTKR++   + S    K   GDPLKTF+  G++GS+R+R++ +HGIKKR+  + GQ M K+RR
Sbjct:  145 QAPPSVSSFGEMSLDPRVERAIERVGWRKPTPVQSAVVPAALSGRDVLVSAPTGSGKTGAYAIPIVQHICRAKSLERSGTKVVVLVPTRELVHQVTGVLKALCRYIGGVQVAAVMSRKKGNTKKNQGAKGGPAKQAHGQQASEALTFTQSADIMVGTPASIVNAAGTEQKSALSEVQFVVVDEADLVLSYGYESDAKAALAKIPPTAQSMLLSATLEADGMASFRKVVLRRPLTIKVTTDGDMKDGDPTGASHYFARLKNHKDRYLVAYAMLRLNVVCGKVLLFVNHVNSAFRLKLFLDQFKVKSAVLNSELPANSRMHCVSQFNAGVFDILIATDESKDDEALVGKKKKSGSKKTDCKKRKVDADEEFGLSRGVDFQDVAAVFNFDVPETVASYTHRAGRTARAGRSGTVMSLVCSDKDQSRVAEMGRELGVHIGPLAFRMDQIEAFRYRVEDCLRMVTDAAVNGARLADVQREIVNSEHLQDYFEDNPQDLDALRHTLSLAKNIPEHLAHIPSYLLPVALRGSVTKDPRGSKFRTKRKRGPSKRSL--KKKSAGDPLKTFSNKGLAGSSRQRFQERHGIKKRQKSNPGQMMKKRRR 740          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A5J4YVS5 (ATP-dependent RNA helicase dbp9 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVS5_PORPP)

HSP 1 Score: 444 bits (1141), Expect = 2.010e-143
Identity = 274/598 (45.82%), Postives = 369/598 (61.71%), Query Frame = 0
Query:  171 PSPIKIFTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTAS--------VAQGLRAVVLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDGDKSAFA------------LSADVLVGTPAAIVSAAGTGLENR---LSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKI-------SASDCIQENESAGAT---HYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDE----AQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTFTTNGVSGSARERYRAK 731
            P  +  F  M LD R+QR I  + +  PT +Q+  IPAAL GRDVLV++PTGSGKTAAYA+P+V  + K A          A  + A+VLVPTR+L  QV  VLK+L + + G+ +  +  +   N+     K+   + A A              AD+LVGTPAAI++ A + ++N     S VEFVVVDEADLVLSYG+ QD  AALS VP SAQ+ML+SATL+ E ++  + ++LRRPL ++I       SA+D   + +SA A    HY+  L+   D++LV YA+LRL V+TGK+L+FVN I  AF+LKLFLD+F + SAVLNSELP NSR+HC++ FNA VFDIL+  DE    A  E   + K              +D++FG  RG+DFR+V+ V NFD+P+   +Y HRAGRTARAG+SGTVL+L    +E++ +  +  E   HI  L  +  QIEAFRYRVED  R VT   +  ARL +V+RE++NS +LK YFEENP+DL AL+H+  L  N P HLAH+P YLLPPALR  V+   +G        K R R+ +   K +RG+      T GV  S + R R +
Sbjct:   22 PEAVHQFNAMLLDARVQRGIRVLGFETPTDVQAHAIPAALAGRDVLVAAPTGSGKTAAYAIPLVDILLKNADEKSDAGRGTAAAVHALVLVPTRDLAAQVTRVLKALTRSVGGLTVSNVKAA--DNKSSKSKKRSLRRVASAEINGTEAVEEGVRVADILVGTPAAILALASS-VQNGGSLFSGVEFVVVDEADLVLSYGFGQDTTAALSMVPTSAQAMLVSATLD-EDVEALRTIVLRRPLAVRIEAETGSGSAADSEAQQQSALAASCLHYFVGLQRVDDKFLVTYAMLRLGVLTGKILVFVNGIDAAFKLKLFLDRFSISSAVLNSELPANSRLHCIEGFNASVFDILLIADEIAEGASAESVGERKDKRGKSKSKKANAARDADFGAVRGLDFRNVSYVLNFDLPRDGKAYTHRAGRTARAGRSGTVLSLAANHDEQDRITELAAEAKVHINSLLLQSAQIEAFRYRVEDCLRSVTKQKIRDARLQEVKRELLNSVKLKAYFEENPDDLAALRHDRALEVNRPAHLAHVPNYLLPPALRADVATRVSGMSRNRNASKHRSRVMRDA-KRRRGNGANP--TGGVEKSVQGRARGR 612          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A7S0BDG9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDG9_9RHOD)

HSP 1 Score: 438 bits (1127), Expect = 1.420e-142
Identity = 252/561 (44.92%), Postives = 362/561 (64.53%), Query Frame = 0
Query:  180 MGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTASVAQGL-RAVVLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTF-TTNGVSGSARERYRAKHGIKKRK 738
            MGLD R+ RA + + + KPTP+Q+++IPAAL GRDVL ++PTGSGKTAA+ VPV+  +    +   G+ RAV+LVPTREL +QVA V + L KY   + +  L             +K GD S    +AD+LV TP+A+          +   V+FVV+DEADLVLSYGY+++ R A++ +P S+QSML+SA+L  E +++ KK++LR+P+ IKI+  +    N S   TH    +   +D+YLV YA+LRL V+TGK LIFVN I TAFRLKLFLD+F ++SA LN ELP NSR+HCV+QFN GVFD+L+A DE     R+++K +            +++EFGLSRG+DF +V+ V NF +P  + SY+HRAGRTARAG++GTVL+L    +E+ +++ +  + G  +  L  RMDQ+E+ RYRVED+ R +T A V  ARL DV+RE++ SE+L+++F+ NP+D +AL+H+  L   +  HL  +PAYLLP ALR    +    A  R K R  + R+          DPL      N    ++R+RYR + GI +++
Sbjct:    1 MGLDVRILRACKALGFEKPTPVQASMIPAALMGRDVLAAAPTGSGKTAAFLVPVLNSLVSKDTFGDGIVRAVILVPTRELCYQVAGVSRKLLKYAPQLSVRTLV------------RKSGDGSV--PTADLLVATPSALAERLDISA-TQFDHVQFVVIDEADLVLSYGYDEETRRAIASIPASSQSMLVSASL-GEDLEELKKLVLRKPMLIKITMDEV--GNSSGLVTHNVTTIATTQDKYLVTYALLRLRVLTGKTLIFVNEIDTAFRLKLFLDKFSIRSATLNGELPLNSRIHCVEQFNGGVFDVLVACDEDLIASRSEDKPN--ERKPKRDSSGRENEFGLSRGIDFHEVSTVLNFGLPFHSNSYMHRAGRTARAGRTGTVLSLAIEGKEQGSLEKICAQQGLRLEKLVMRMDQVESLRYRVEDSLRSITRAHVLEARLRDVKREMLASEKLQDFFDSNPKDFEALKHDKALTPQVQPHLGDLPAYLLPAALREKAQSR---APMRRKSRPNKKRLDDR-------DPLDNVGRKNRSHETSRDRYRHRKGIARKR 531          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A7S3A6H5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A6H5_9RHOD)

HSP 1 Score: 394 bits (1012), Expect = 8.200e-126
Identity = 221/451 (49.00%), Postives = 303/451 (67.18%), Query Frame = 0
Query:  173 PIKIFTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTASVAQGL-RAVVLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAG-ATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGAR 621
            P+  F EMGLD R+ RA + + + KPTP+Q+++IPAAL GRDVL ++PTGSGKTAA+ +P++  +    +   G+ RA++LVPTREL +QVA V + L KY   + +  L             +K GD S    +AD+LV TP+A+    G         V+FVVVDEADLVLSYGY+++ R A++ +P SAQSML+SA+L  E +D+ KK++LR+PL IKI+  D     ES+G  TH    L   +D+YLV YA+LRL V+TGK LIFVN I TAFRLKLFLD+F ++SA LN ELP NSR+HCV+QFNAGVFD+L+A DE     R+D+K              +++EFGLSRG+DF +V+ V NF +P  + SY+HRAGRTARAG++GTVL+L    +E+E+++ +  + G  +  L  RMDQ+E+ RYRVED+ R +T A V  AR
Sbjct:   80 PVGSFEEMGLDARVLRACKALGFDKPTPVQASMIPAALIGRDVLAAAPTGSGKTAAFLLPILNSLVSRDTFGDGIVRAIILVPTRELCYQVAGVCRKLVKYAPQLSVRTLV------------RKSGDGSV--PNADLLVATPSALAERLGNSA-TEFDHVQFVVVDEADLVLSYGYDEETRRAIASIPPSAQSMLVSASL-GEDLDELKKLVLRKPLLIKITMDDV---GESSGQVTHNITTLTTTQDKYLVTYALLRLQVLTGKTLIFVNEIDTAFRLKLFLDKFSIRSATLNGELPLNSRIHCVEQFNAGVFDVLVACDEDLIVSRSDDKPS--KRKPKRDSGGRENEFGLSRGIDFHEVSTVLNFGLPFHSNSYMHRAGRTARAGRTGTVLSLAIEGKEQESLEKICAQQGLRLEKLVMRMDQVESLRYRVEDSLRSITRAHVLDAR 509          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A7S0ZBI1 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBI1_9RHOD)

HSP 1 Score: 372 bits (954), Expect = 2.290e-118
Identity = 215/425 (50.59%), Postives = 288/425 (67.76%), Query Frame = 0
Query:  296 KDGDKSAFALS--ADVLVGTP-AAIVSAAGT-GLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISAS---------DCIQENE----------SAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRV 697
            KD   S+ ALS  AD+LVGTP AA+    GT  +    S VE VVVDEADLVLS+GY +D   ALS VP SAQS+L+SAT++ E +   +K++LR PLT+K+S+          D   EN+          ++ ATH+Y RLK   D+YLV YA+LRL V+ GKVL+F+N I +AFRLKLFLDQF ++SAVLNSELP NSR+H ++QFNAG+F+ILIA DE+     A   + G           KDS+FG  RG+DF++VA V NF++ + + +Y+HRAGRTARAG+SGTVL+L   +EEE+ ++ + +E    + PL  +  QI+AFRYRVED+ R VT A V  ARL DV+RE+VNSE+LK YF++NP+D DALQH+ +L   +  HL+HIP YLLPP LR SV+    G K  ++ R R++
Sbjct:    1 KDASASSVALSSGADILVGTPTAALEFVRGTKDVREIFSGVECVVVDEADLVLSFGYGRDTEEALSLVPTSAQSILISATMD-EDVTALRKIVLRNPLTVKVSSGVVSNGTKQDDIGLENKKEAESDAQRIASQATHHYVRLKNSNDKYLVTYAMLRLGVLIGKVLVFLNDIDSAFRLKLFLDQFSIRSAVLNSELPANSRLHSIEQFNAGLFEILIAVDESTSG-AAHFSKTGSKSKKKSIRLRKDSDFGAVRGLDFQNVATVLNFEMCRDSRNYVHRAGRTARAGQSGTVLSLAHTEEEEQRLQKIAREVPLTMNPLLLQSGQIDAFRYRVEDSLRAVTSAKVRDARLCDVKRELVNSERLKQYFDDNPKDRDALQHDRSLMPRVQPHLSHIPNYLLPPVLRASVAPNVPGMKHDSRSRSRKM 423          
BLAST of Ggra7020.t1 vs. uniprot
Match: probable ATP-dependent RNA helicase DDX56 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069B922 (probable ATP-dependent RNA helicase DDX56 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069B922)

HSP 1 Score: 372 bits (956), Expect = 6.190e-117
Identity = 229/586 (39.08%), Postives = 340/586 (58.02%), Query Frame = 0
Query:  165 ENIEKAPSPIKIFTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHIC---KTASVAQGLRAVVLVPTRELVHQVASVLKSLCKY----IDGIHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDE-------EEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTL-AKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRV----RMSKGGNKGKRGDPLKTFTTNGVSGSARERYRAK 731
            EN++K    +K F E GLD RL +AI +++W KPT IQ + IP A+ G+D+L  + TGSGKTAAYA+P++Q I    KT      ++A++LVPT+EL  Q    +K L  Y    +  + +   T              D  +       D+++GTP+ +++           T++ +VVDEADLV SYGYE D +  LS +P   Q+ L+SATL +E + + KK++L+ P+T+K+  SD  +E+       Y  + +   D++L+ Y +L+L ++ GK LIFVN I   +RLKLFL+QF +K+ VLNSELP NSR H V++FN G++D +IATDE  D  ++  K H            K SE+G+SRG+DF+DV  V NFD PKT  +Y+HR GRTAR   +G  L+L+   +       EE    +          P  F+M++IE FRYR +DA R VT A+V  ARL +++ EI+NSE+LK +FE+NP DL  L+H+  L    I  HL H+P YL+P  L+ +++N        ++RRKR      +  K  NK ++ DPL+TF     S   ++R ++K
Sbjct:    4 ENVQKE---VKHFHEFGLDDRLLKAISKLKWSKPTAIQESAIPLAIEGKDILARAKTGSGKTAAYAIPIIQKILQEKKTNQSEGSVKALILVPTKELSQQACKNVKDLTSYCSRSVRVVDVAQAT-------------LDVVRPILLERPDIVIGTPSRVLAHLQAKDLELKETLKMLVVDEADLVFSYGYEYDLKTLLSHLPKIYQAFLMSATL-SEEVKELKKIVLQNPVTLKLDISDLPEESS---LKQYLIKCEAD-DKFLLVYTLLKLKLVLGKTLIFVNGIDRCYRLKLFLEQFSIKTCVLNSELPHNSRCHIVEEFNKGIYDYIIATDENIDSAKSS-KPH--------KNVNKASEYGVSRGIDFQDVENVLNFDFPKTVENYVHRVGRTARGHNTGNALSLVTSSDDKMITAVEERLSPNFASANERIFKPFKFKMEEIEGFRYRAQDALRAVTKASVREARLKEIKSEILNSEKLKAFFEDNPRDLQLLKHDKDLHPAKIQPHLKHVPDYLVPDTLKPTMTN--------SQRRKRSYVSFHKHQKNSNKKQKLDPLRTFKATQKSHENKKRRKSK 551          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A6P8HR07 (RNA helicase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HR07_ACTTE)

HSP 1 Score: 370 bits (949), Expect = 6.560e-116
Identity = 232/554 (41.88%), Postives = 324/554 (58.48%), Query Frame = 0
Query:  177 FTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHIC--KTASVAQGLRAVVLVPTRELVHQVASVLKSLCKYIDG-IHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVS---AAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTL-------ICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTL-AKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGG-NKGKRGDPLKTF 715
            F++MGLD R+ RAI R+ W KPTPIQ   I  AL G+D+L  + TGSGKTAAYAVP++Q I   K  +    +RA+VLVPT+EL  Q +  LK L  Y    I +  +       +G   N K           D+++GTP+ I+    A    L+N L   + +VVDEADLV SYGYE D +  LS +P   Q+ L+SATL  + +   KK++L  P+T+K++ S   Q  E      Y  R +   D++L+ Y +L+LN++ GK L+FVN I   +RLKLFL+QF +KS VLNSELP NSR+H VD+FN GV+D +IA+DE        E               KD E+G+SRG+DF+ V  V NFD P T  +Y+HR GRTAR   SGT L+        + +  EE+  K +G+E      P  F+M++IE FRYR +DA R VT +AV  ARL +++REI+NSE+LK YFE+NP DL  L+H+  L    +  H+ ++P YL+P  L+ +++          KR+ + +    G  NK  + DPLKTF
Sbjct:   11 FSDMGLDDRITRAISRLNWSKPTPIQEKGITLALEGKDILARAKTGSGKTAAYAVPIIQKILQDKQNNNELAIRALVLVPTKELSQQASRNLKELSCYCSREIRVADVA------QGNLANTKP----LLMNIPDIVIGTPSGILGHLQAKNLTLKNSL---QMLVVDEADLVFSYGYENDLKLLLSHLPKIYQAFLMSATL-TDDVKSLKKMVLHNPVTLKLNES---QLPEKDRLMQYLIRCEPD-DKFLLIYTLLKLNLVQGKTLLFVNGIDRCYRLKLFLEQFSIKSCVLNSELPHNSRLHIVDEFNRGVYDYIIASDET-----VFETVGTLHPTKKSKKSKKDKEYGVSRGIDFQGVENVINFDFPTTVDAYIHRVGRTARGDNSGTALSFTTYHDNTVVKKAEEQLAKELGEESEV-FKPYQFKMEEIEGFRYRAKDALRAVTKSAVKEARLKEIKREIINSEKLKAYFEDNPRDLQVLRHDKELHPARVQAHMKNVPDYLVPATLKPTMAKR--------KRKNKHIPFKSGSANKKAKSDPLKTF 532          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A670J5V3 (RNA helicase n=3 Tax=Lacertinae TaxID=162266 RepID=A0A670J5V3_PODMU)

HSP 1 Score: 366 bits (939), Expect = 2.610e-114
Identity = 224/567 (39.51%), Postives = 334/567 (58.91%), Query Frame = 0
Query:  177 FTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTAS----VAQGLRAVVLVPTRELVHQVASVLKSLCKYID-GIHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDE-----EEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNI-PDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTFTTNGVSGSARERYRAKH 732
            F  +GLD RL +A   + W KPT IQ   IP AL G+D+L  + TGSGKT AYA+P++QH+ +  +    V Q +R ++LVPT+EL  QV  +L+ L  Y    +H+  ++G                +       DV+VGTP+ +++    G  +   ++E +V+DEADL+ S+G+E+D ++ L  +P   QS L+SAT  A+ ++  K+++L  P+T+K+  S   Q  +S+  + +  R +   D++L+ YA+L+L+++ GKV++FV+ I   +RLKLFL+QF + + VLNSELP  SR H + QFN G  D +IATDE    E+    +             KD E+G+SRG+DF++V+AV NFD P +  SY+HRAGRTARA   GT LT +   E     E EA  + G      + P  FRM++IE  RYR  DA R VT  A+  ARL +++ E++NSE+LK YFE+NP DLD L+H+  L   I   HL ++PAYL+PP LR     +P G+K    RR+R+    K   +G+R +PL++F        A+ R  AKH
Sbjct:    8 FAHLGLDARLLQATAELGWAKPTLIQEKAIPLALEGKDLLARAKTGSGKTGAYALPLLQHLLRGKASALVVEQAVRGLILVPTKELGQQVLQMLRQLTSYCSRDLHLVDISGQAD---------LAAQRPILMEKPDVVVGTPSRVLAHLKAGSLSLQDSLEILVLDEADLLFSFGFEEDLKSLLCHLPKIYQSFLMSATFNAD-VEALKELVLHNPVTLKLQES---QLPDSSKLSQFQIRCETEDDKFLLLYALLKLSLVKGKVILFVSTIDRCYRLKLFLEQFSIPACVLNSELPVQSRCHIISQFNRGFCDYIIATDEQDLGEKEGPARGKRKRKGNKAAKGKDQEYGVSRGIDFQNVSAVLNFDFPPSVESYIHRAGRTARADNPGTALTFVLPSEKAVLAEIEAALTGGGSDDTPLRPYLFRMEEIEGLRYRCRDAMRSVTKQAIKEARLREIKEELLNSEKLKTYFEDNPRDLDLLRHDKPLHPAIVKPHLRNVPAYLVPPTLRAVA--QPLGSK----RRRRKPLPPK--TRGQR-NPLRSFRCTKQRSGAKHRS-AKH 551          
BLAST of Ggra7020.t1 vs. uniprot
Match: A0A8D2J956 (RNA helicase n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2J956_VARKO)

HSP 1 Score: 364 bits (934), Expect = 1.200e-113
Identity = 219/551 (39.75%), Postives = 331/551 (60.07%), Query Frame = 0
Query:  177 FTEMGLDPRLQRAIERMQWRKPTPIQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICK----TASVAQGLRAVVLVPTRELVHQVASVLKSLCKYIDG-IHIGALTGSYSSNRGKSGNKKDGDKSAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQDARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRLKLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQ--DEERADEKQHGXXXXXXXXXXXKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLHRAGRTARAGKSGTVLTLICRDE----EEEAVKSMGKEGGCHIAPLAFRMDQIEAFRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQHNLTLAKNI-PDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMSKGGNKGKRGDPLKTF 715
            F  +GLD R+ +A+  M W +PT IQ+  IP AL G+D+L  + TGSGKT AYAVP++QH+ +    TA  AQ +R +VLVPT+EL  QV  +L+ L  Y    + +  ++G                +       DV+VGTP+ +++       N   ++E +V+DEADL+ S+G+E+D ++ L  +P   Q+ ++SAT   E +   K+++L  P+T+K+  S   Q   S+  + ++ R ++  D++L+ YA+L+L+++ GKV+ FV+ I   +RLKLFL+QF + + VLNSELP  SR H + QFN G++D +IATDE    + E + E               KD E+G+SRG+DF++V+AVFNFD P +  SY+HRAGRTARA   GTVLT +   E     +  V+ MG      + P  FRM++IE  RYR +DA R VT  A+  ARL +++ E++NSE+LK YFE+NP DL  L+H+  L   I   HL ++P YL+PPAL+  V   P  +K   KR+K   R++KG     + +PL++F
Sbjct:    8 FAHLGLDARILQAVGDMGWAQPTLIQAQAIPLALEGKDLLARARTGSGKTGAYAVPLLQHLLRGKAATAVAAQAVRGLVLVPTKELGRQVLQMLRQLTAYCAREVRVVDVSGQAD---------VAAQRPLLMEKPDVVVGTPSRVLAHLQAQNLNLQDSLEILVMDEADLLFSFGFEEDVKSLLCHLPKIYQTFIMSATFN-EDVQALKELVLHNPVTLKLQES---QLPNSSQLSQFHIRCEMEEDKFLLLYALLKLSLVRGKVIFFVSTIERCYRLKLFLEQFSIPACVLNSELPVQSRCHIISQFNKGIYDYIIATDEQDLAEPEGSGEAAGRKKRKGAKAEKGKDKEYGVSRGLDFQNVSAVFNFDFPSSVVSYIHRAGRTARANNPGTVLTFVLPTEIALLAQIEVELMGGSSEAALQPYQFRMEEIEGLRYRCQDAMRSVTKQAIKEARLREIKEELLNSEKLKTYFEDNPRDLSLLRHDKPLHPAIVKPHLCNVPEYLVPPALQ--VMARPLRSK--RKRQKPLPRVTKG-----QRNPLRSF 536          
The following BLAST results are available for this feature:
BLAST of Ggra7020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2Z52.640e-30875.81ATP-dependent RNA helicase dbp9 n=1 Tax=Gracilario... [more]
R7Q6122.970e-25363.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YVS52.010e-14345.82ATP-dependent RNA helicase dbp9 n=1 Tax=Porphyridi... [more]
A0A7S0BDG91.420e-14244.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A6H58.200e-12649.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZBI12.290e-11850.59Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
probable ATP-dependent RNA helicase DDX56 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069B9226.190e-11739.08probable ATP-dependent RNA helicase DDX56 n=1 Tax=... [more]
A0A6P8HR076.560e-11641.88RNA helicase n=1 Tax=Actinia tenebrosa TaxID=6105 ... [more]
A0A670J5V32.610e-11439.51RNA helicase n=3 Tax=Lacertinae TaxID=162266 RepID... [more]
A0A8D2J9561.200e-11339.75RNA helicase n=2 Tax=Varanus komodoensis TaxID=612... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 448..559
e-value: 6.8E-20
score: 82.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 422..559
e-value: 1.2E-27
score: 96.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 426..599
score: 12.291554
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 194..402
e-value: 1.2E-38
score: 144.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 206..390
score: 25.366209
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 118..394
e-value: 2.1E-62
score: 212.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 404..594
e-value: 1.8E-35
score: 123.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 419..578
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 170..392
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 199..377
e-value: 3.9E-38
score: 131.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 688..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..753
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 140..647
NoneNo IPR availablePANTHERPTHR24031:SF96ATP-DEPENDENT RNA HELICASE DDX56-RELATEDcoord: 140..647
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 442..753
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..421
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 422..441
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 408..568
e-value: 6.80141E-34
score: 124.157
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 175..203
score: 11.33656

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:74242..76503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7020.t1Ggra7020.t1Gracilaria gracilis GNS1m malemRNAtig00000062_pilon 74242..76503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7020.t1 ID=Ggra7020.t1|Name=Ggra7020.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=754bp
MTKKQRRVSFVLPEKDEESAQEQEVSVSYANEIEFDDDVETAPPIDKADS
DEEQGDESEGEQNEPSLESKGKSSLTERMHKRKDSRKRSTVKKRERGTKR
HVSHLSTEDRKDEDESDKTDSSTSSSDGADKSEESDEDESSESSDSTSNA
SSDSESESSEDEKQENIEKAPSPIKIFTEMGLDPRLQRAIERMQWRKPTP
IQSAVIPAALHGRDVLVSSPTGSGKTAAYAVPVVQHICKTASVAQGLRAV
VLVPTRELVHQVASVLKSLCKYIDGIHIGALTGSYSSNRGKSGNKKDGDK
SAFALSADVLVGTPAAIVSAAGTGLENRLSTVEFVVVDEADLVLSYGYEQ
DARAALSKVPMSAQSMLLSATLEAEGMDKFKKVILRRPLTIKISASDCIQ
ENESAGATHYYARLKIHRDRYLVAYAILRLNVITGKVLIFVNHISTAFRL
KLFLDQFKVKSAVLNSELPTNSRVHCVDQFNAGVFDILIATDEAQDEERA
DEKQHGKKEKRSRKRKRKDSEFGLSRGVDFRDVAAVFNFDVPKTAGSYLH
RAGRTARAGKSGTVLTLICRDEEEEAVKSMGKEGGCHIAPLAFRMDQIEA
FRYRVEDAFRLVTDAAVHGARLADVRREIVNSEQLKNYFEENPEDLDALQ
HNLTLAKNIPDHLAHIPAYLLPPALRGSVSNEPNGAKFRTKRRKRRVRMS
KGGNKGKRGDPLKTFTTNGVSGSARERYRAKHGIKKRKSRDDGQTMLKKR
RRH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif