Ggra6973.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6973.t1
Unique NameGgra6973.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
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BLAST of Ggra6973.t1 vs. uniprot
Match: A0A2V3IBT3 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 1.330e-8
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 0 
Query:  209 LRTTVSQFLRWAVVRSSCSKYDVWKEEALFKSIARVELVEPFISYFERRCDERTAKEKAADLLNICDSAYSAARGKRMREGLSKVSMLLQ 298
            L TTVSQFLRWA+  S+CS+ DVWKE  LF+++A  ++V  FI     R    T K +   +  +CD     +    +   L  V ++LQ
Sbjct:  206 LSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTAIGMRLKLVLIVLQ 295
The following BLAST results are available for this feature:
BLAST of Ggra6973.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBT31.330e-837.78Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000915_piloncontigtig00000915_pilon:142840..144006 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6973.t1Ggra6973.t1Gracilaria gracilis GNS1m malemRNAtig00000915_pilon 142840..144006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6973.t1 ID=Ggra6973.t1|Name=Ggra6973.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MSEPVDLVREVIVISSDEEEVNVMAIRSRGTKRGLDRNLVEEDMERTARA
KRFRIGTALSSDEEELIPMGIRSRRTQQELGRGLVEEDAESTARAESLRI
RTELSFPSSNRQANEEEGIKERAFVEDSDSGTESAIDRGLEGKPASSVWD
WEGGTDCASVSEWEGDKETPNVVSNDKECKGEFDSKLVAYCELNGVVGDS
RKTKAVKLLRTTVSQFLRWAVVRSSCSKYDVWKEEALFKSIARVELVEPF
ISYFERRCDERTAKEKAADLLNICDSAYSAARGKRMREGLSKVSMLLQCV
AGKRGRRLSTPLLGRLRSSADDLESWTGEEQ*
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