Ggra697.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra697.t1
Unique NameGgra697.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length515
Homology
BLAST of Ggra697.t1 vs. uniprot
Match: A0A2V3IBB6 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBB6_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 7.220e-38
Identity = 100/272 (36.76%), Postives = 137/272 (50.37%), Query Frame = 0
Query:  209 RILHARRLLREADLAPRRRTTQDVRPVPLYFGNMRKGPIGSYRRSLTTALPAWAMLAISFSGRGVGEVLVHAPLCARATATMRALGYRPLPEFDPISDERFHNAQLTAAENTLRNIHACHYRYTRNADTPTRAAHYCWDDTIPQHDLDNMPASHDTAGIRDWAHTTETQPTALHRIADASDRQQSTHPHDAHRTPRIASASDDTPRHDGDTRRTDARVKQNQVDEQWDDQADYARRWLMLPLSRWHTAREM-QQMHVRDTDKRAQAHNRPLT 479
            RI HA+  L  +DLAP     +  +P+ LYF  M++GPIG YRR+LTTALP WA+ +ISF GR +GE+LVH  L  RA ATM+ALG+R L + DP+ D RF +  LT  EN LRN+HACHYR+ + A TP  +A   W            PA             TE Q      +     RQ+     +A   P ++ AS +   +D  +  +D+      VDE+        R+    P S    A     Q+H RDT+   +  + P T
Sbjct:    4 RIAHAKAKLLHSDLAPVPPPRRQAQPIALYFAGMQRGPIGRYRRALTTALPGWALCSISFVGRQIGELLVHKSLADRAIATMKALGFRHLHQLDPVMDPRFKDRGLTTEENILRNVHACHYRFQQAASTPIPSARK-WYLNAAARLTARFPALF-----------TEVQAAQYQEL-----RQRLLKAREARLQPPVSDASSEGSEYDPPSHSSDSTTDLATVDEEGFTTVTRKRKTPTSPSSTPTPATTPPSQLHARDTEGDTEKADAPPT 258          
BLAST of Ggra697.t1 vs. uniprot
Match: A0A2V3IBX0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX0_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 5.640e-21
Identity = 60/146 (41.10%), Postives = 79/146 (54.11%), Query Frame = 0
Query:  201 DLEESTRERILHARRLLREADLAPRRRTTQDVRPVPLYFGNMRKGPIGSYRRSLTTALPAWAMLAISFSGRGVGEVLVHAPLCARATATMRALGYRPLPEFDPISDERFHNAQLTAAENTLRNIHACHYRYTR--NADTPTRAAHY 344
            +L  + R ++   +  LR A+L P  R      PV LYF N+R+GPIG YRR LT  LP WA+LA+SF GR   E+L HAP   R   +M+ LGY  LP++DP    R+   Q   +E  L  +  C  R+ R  N   PT  A Y
Sbjct:    4 ELRPAMRNKLQETKDALRAANLTPIPRVDARPNPVALYFTNVRRGPIGEYRRILTRFLPGWAVLALSFIGRSTAEILTHAPYQTRLITSMKLLGYAHLPDYDPSKPFRYRRNQSDQSEE-LTAMEQCANRWRRCANGRPPTVRAWY 148          
BLAST of Ggra697.t1 vs. uniprot
Match: A0A2V3IBZ2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ2_9FLOR)

HSP 1 Score: 97.8 bits (242), Expect = 9.940e-19
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 0
Query:  201 DLEESTRERILHARRLLREADLAPRRRTTQDVRPVPLYFGNMRKGPIGSYRRSLTTALPAWAMLAISFSGRGVGEVLVHAPLCARATATMRALGYRPLPEFDP 303
            +L    ++R+   +  LR A+L P  R      P  LYF N+R+GPIG YRR LT  LP WA+LA+SF GR   E+L HAP  +R  A+MR LG   LP++DP
Sbjct:    2 NLRPEMKDRLQATKDALRAANLTPLPRAAGQPNPTALYFANVRRGPIGEYRRILTRFLPGWAVLALSFIGRSTAEILTHAPYQSRLVASMRLLGSTHLPDYDP 104          
The following BLAST results are available for this feature:
BLAST of Ggra697.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IBB67.220e-3836.76Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IBX05.640e-2141.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBZ29.940e-1946.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000205_piloncontigtig00000205_pilon:96608..99950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra697.t1Ggra697.t1Gracilaria gracilis GNS1m malemRNAtig00000205_pilon 96608..99950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra697.t1 ID=Ggra697.t1|Name=Ggra697.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=515bp
MVEHGAGHDADQTRQLMQNVDQIVTAQTRMLTARLTTLEEIILDVRKELQ
ESKAVRRAAGATTAVPQGSALPEATISGVQTAETGSHATDKDGGTIQGEI
AALKAQMQHLQAENRALVHKLAQVQGVGFPQNSGWIPQVQRNTQHVMAAP
RPPQVHQAPHVLAQGAQVRNDAEHRLPTGVGATGRKTLAQIVAEPRTELA
DLEESTRERILHARRLLREADLAPRRRTTQDVRPVPLYFGNMRKGPIGSY
RRSLTTALPAWAMLAISFSGRGVGEVLVHAPLCARATATMRALGYRPLPE
FDPISDERFHNAQLTAAENTLRNIHACHYRYTRNADTPTRAAHYCWDDTI
PQHDLDNMPASHDTAGIRDWAHTTETQPTALHRIADASDRQQSTHPHDAH
RTPRIASASDDTPRHDGDTRRTDARVKQNQVDEQWDDQADYARRWLMLPL
SRWHTAREMQQMHVRDTDKRAQAHNRPLTPCDQGLKHVGAPPADTTHDEQ
APPVAQQQSHKPEL*
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