Ggra6953.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6953.t1
Unique NameGgra6953.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length771
Homology
BLAST of Ggra6953.t1 vs. uniprot
Match: A0A2V3IE03 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE03_9FLOR)

HSP 1 Score: 223 bits (568), Expect = 6.460e-63
Identity = 113/251 (45.02%), Postives = 152/251 (60.56%), Query Frame = 0
Query:  465 CELDGACFEHATHHMTLHLARVINDGTTDISVDQSTLQSASRVVEAYPL-TTRVSKAWRPPGKFPQYQRLPLHILIFLQNLWLDKSFFHLACNKAVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSSRDETHTTYGKGMLGVTAERFRKYCIETELEGDVFLILTG-----NSGGDRKKPVVWVVPAPFCAAGYINDARYVEGDPEKDGPV 709
            CE D ACFEHA H   +  A +I +G TDI   Q   + A  V  A+P+  +R +  WR    FP YQ LP H++ FL  LW  +    L   KA+  WP + +G ++  + +SLLA +A    + V KSTI+H KAG+GVFAT      +V+C+FYGTLVYH+LS+R E H TYG+G++GV  +RFRKY ++ E+ G  F  L       N  G +  P++WVVPAPFC AGYIN  +YVEGD + D  V
Sbjct:   24 CEPDKACFEHARHAAIVRFASIIREGHTDIEKSQELGKMARCVSSAFPIGRSRHTVLWRAVNGFPPYQILPPHLVDFLSTLWQSEILRKLGRKKAMDGWPRELQGRMNLENMKSLLAMEAVQYGLRVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNRKEVHKTYGEGVMGVKKDRFRKYAVKIEVYGQQFQSLPHRKQLTNWHGKQANPILWVVPAPFCIAGYINYPKYVEGDKQLDAMV 274          
BLAST of Ggra6953.t1 vs. uniprot
Match: R7QPQ1 (Adenine specific DNA methyltransferase n=6 Tax=Chondrus crispus TaxID=2769 RepID=R7QPQ1_CHOCR)

HSP 1 Score: 161 bits (407), Expect = 3.360e-37
Identity = 99/303 (32.67%), Postives = 144/303 (47.52%), Query Frame = 0
Query:  465 CELDGACFEHATHHMTLHLARVINDGTTDIS--VDQSTLQSASRVVEAYPLTTRVSKA-WRPPGKFPQYQRLPLHILIFLQNLWLDKSFFHLACNKAVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSSRDETHTTYGKGMLGVTAERFRKYCIETELEGDVFLILTGNSGGDRKKPVVWVVPAPFCAAGYINDARYVEGDPEK----DGPVPPGGWRDNNASFERTKRGTTSLRNLEAPQLLSIIAARDIEEGEEIFMDYGR 760
            CE +  CFEHA   +    A  I +   D+   +    +  A+  V       R     W PP   P YQ  P HIL +L   W          N  +  W  + +G   + D  +L A +A    V +A S+++HPKAGLG+FAT  F  +D IC +YGTLVYH+L      +  YG+G++GV  ERF  Y +    +G VF  +T    G +    + +VP+ FC   +IND RY   D +     DG +     R+ N +++ +    TS   L+   L+ + A R I  GEE+F DY R
Sbjct:  698 CEKEAVCFEHAKKKVIESYAGAIVNKLVDVGQVMTDDDIHGAALYVHNRNGNRRSRNGKWAPPSGLPPYQTFPDHILAYLSTAWESPELIQKCRNVPLNAWKRELQGRFHQTDVHALRAIEAVQFGVALAPSSVRHPKAGLGLFATRTFDVDDDICLYYGTLVYHDLIRSKSKNKPYGEGLMGVDRERFMTYAMLVPTQGRVFQNVTDLIDGQKA---ISIVPSRFCVGAFINDHRYHPDDKDHKDFVDGRLANP--RNVNVAYDLSVSKVTSTSALQKHTLMRVKALRLINPGEELFADYIR 995          
BLAST of Ggra6953.t1 vs. uniprot
Match: A0A2V3IWE9 (DNA adenine methyltransferase YhdJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWE9_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 9.190e-30
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 0
Query:  465 CELDGACFEHATHHMTLHLARVINDGTTDISVDQSTLQSASRVVEAYPLTTRVSKAWRPPGKFPQYQRLPLHILIFLQNLWLDKSFFHLACNKAVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHFYGTLVYHNLSSRDETHTTYGKGMLGVTAERFRKYCI 655
            CE D ACFEHA +   +  A +I +G  DI   Q   + A    E +P+   +   W   G                       + + L   KA+  W  + +G ++  + +SLLA +A    + V KSTI+H KAG+GVFAT      +V+C+FYGTLVYH+LS++ E H TYG+G++GVT +RFRKY +
Sbjct:   79 CEPDKACFEHARNAAIVRFASIIREGQRDIEKSQELRKMAH--CERWPIVIPLHSQWDEAG-----------------------TPWKLGRKKAMDGWLRELQGRMNLENMKSLLAMEAVQYGLGVGKSTIRHEKAGVGVFATRRIAAGEVVCYFYGTLVYHDLSNQKEVHKTYGEGVMGVTKDRFRKYAV 244          
BLAST of Ggra6953.t1 vs. uniprot
Match: A0A2V3J6I8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I8_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 1.570e-22
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  465 CELDGACFEHATHHMTLHLARVINDGTTDISVDQSTLQSASRVVEAYPLT-TRVSKAWRPPGKFPQYQRLPLHILIFLQNLWLDKSFFHLACNKAVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKAGLGVFATTAFKENDVICHF 619
            CE D A FEHA H   +  A +I +G  DI   Q   + A  V  A+P+  +R +  WR    FP YQ LPLH+  F   LW  +    L   K +  WP++  G ++  + +SLLA +A    + V KSTI+H KAG+GVFAT      +++C+F
Sbjct:   79 CEPDKARFEHARHAAIVRFAYIIREGHKDIEKSQELRKMARCVSSAFPMRRSRQTVIWRAVDGFPPYQILPLHLDDFFSTLWQIEILVKLGRKKPLVGWPKELPGRMNLENMKSLLAIEAVKYGLRVGKSTIRHEKAGVGVFATRRTAAGELVCYF 234          
The following BLAST results are available for this feature:
BLAST of Ggra6953.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IE036.460e-6345.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPQ13.360e-3732.67Adenine specific DNA methyltransferase n=6 Tax=Cho... [more]
A0A2V3IWE99.190e-3036.65DNA adenine methyltransferase YhdJ n=1 Tax=Gracila... [more]
A0A2V3J6I81.570e-2237.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10SET domaincoord: 713..764
e-value: 2.5E-5
score: 26.5
NoneNo IPR availableGENE3D2.170.270.10SET domaincoord: 570..664
e-value: 1.5E-6
score: 30.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..770
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..142
NoneNo IPR availableCDDcd08161SETcoord: 715..759
e-value: 1.02732E-4
score: 39.1564
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 595..763
IPR001214SET domainPROSITEPS50280SETcoord: 586..759
score: 11.204588

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:321820..324858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6953.t1Ggra6953.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 321820..324858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6953.t1 ID=Ggra6953.t1|Name=Ggra6953.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=771bp
MAPTDRDTMQRLYRSADIFFALRDSFAEEGSHKGRPREAGFRTIAQYAAE
NHERLDLARQFLETEVQSPNLGNFEIEDLKETVIRKKPLEQMYMVCRILD
VTDDSSDTRTRDLMKMISRSPHALPIGCYLIPFLRSFTAVVKSQSDMFFR
TVRSPTRFGILLYLSNLLYIMREKESRRQNKKRRLTTGAAPGIFLEGFPN
FSKETCQRTGFAVEMTIYAWDIFARGLGFDDVESMIYPYIMFDTNNMMFK
VLDNRSIGYCPLSHHTRLEENVEPTMKRGGVVAAFSDDVDSNLRILAKEF
LDDVHGMCTHERLYTLQGQNKHERWVTLEQLTPDMDRKARDPSHTRDEQF
PERFDRLAEDLWKPILDATGCARAEASNADVEMVQAPVNLVSSDEDDFEP
APVPIRSKFDTPDRTVEPPKVAKGRFLPNAMKQLNELMRTSYSVLYNCNQ
KDLVVTHESLGMERCELDGACFEHATHHMTLHLARVINDGTTDISVDQST
LQSASRVVEAYPLTTRVSKAWRPPGKFPQYQRLPLHILIFLQNLWLDKSF
FHLACNKAVGDWPEKYRGALDRVDSRSLLAQDASCSSVTVAKSTIKHPKA
GLGVFATTAFKENDVICHFYGTLVYHNLSSRDETHTTYGKGMLGVTAERF
RKYCIETELEGDVFLILTGNSGGDRKKPVVWVVPAPFCAAGYINDARYVE
GDPEKDGPVPPGGWRDNNASFERTKRGTTSLRNLEAPQLLSIIAARDIEE
GEEIFMDYGRPYDWAKQLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom