Ggra6936.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6936.t1
Unique NameGgra6936.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length118
Homology
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A2V3IT81 (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT81_9FLOR)

HSP 1 Score: 189 bits (479), Expect = 2.490e-59
Identity = 89/114 (78.07%), Postives = 101/114 (88.60%), Query Frame = 0
Query:    3 SAGAAQLMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            SA  +++ Q+D+VVG GAAFKSGD + VHYTLTLG+FDS QV+DSSRSRGRPF YRYDT SVI GWD GVTGM+VGGRR L+IPPELGYG AGAGGVIPPN+TLYFDIELL+VG
Sbjct:   50 SAAQSEVQQEDLVVGTGAAFKSGDTIFVHYTLTLGAFDSPQVIDSSRSRGRPFSYRYDTSSVIKGWDSGVTGMKVGGRRRLIIPPELGYGAAGAGGVIPPNSTLYFDIELLRVG 163          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A845YDB1 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symploca sp. SIO2G7 TaxID=2607798 RepID=A0A845YDB1_9CYAN)

HSP 1 Score: 137 bits (346), Expect = 4.970e-39
Identity = 69/108 (63.89%), Postives = 80/108 (74.07%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            LM +D+ VG GA   +G  V VHYT TL   ++G+  DSSR R RPF +R   G VI GWD+GV  MRVGGRR LVIPPELGYGT GAGGVIPPNATL FD+ELL++G
Sbjct:   74 LMYEDLEVGTGALPATGQSVTVHYTGTL---ETGKKFDSSRDRNRPFSFRIGVGQVIKGWDEGVATMRVGGRRTLVIPPELGYGTRGAGGVIPPNATLIFDVELLRIG 178          
BLAST of Ggra6936.t1 vs. uniprot
Match: U9W268 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9W268_9CYAN)

HSP 1 Score: 134 bits (338), Expect = 9.620e-38
Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            LM +D+ VG GA    G  V VHYT TL   ++G+  DSSR R RPF +    G VI GWD+GV  MRVGGRR LVIPPELGYGT GAGGVIPPNATL FD+EL++VG
Sbjct:   80 LMYEDLEVGTGALPTPGQAVTVHYTGTL---ENGEKFDSSRDRNRPFSFTIGVGQVIKGWDEGVATMRVGGRRKLVIPPELGYGTRGAGGVIPPNATLIFDVELIRVG 184          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A2N5JQ57 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JQ57_9CYAN)

HSP 1 Score: 133 bits (334), Expect = 1.400e-37
Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 0
Query:    6 AAQLMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKV 115
            A+ L  +D+ VGNGA+ +   +V VHYT   G  ++G+  DSSR RG PF +R   G VI GWD+GV  M+VGG+R L+IPPELGYG+ GAGGVIPPNATL FD+ELLKV
Sbjct:   40 ASGLKYRDIKVGNGASAEKDQVVFVHYT---GKLENGRKFDSSRDRGTPFAFRLGVGEVIKGWDEGVASMKVGGQRELIIPPELGYGSQGAGGVIPPNATLIFDVELLKV 146          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A846FPW2 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FPW2_9CYAN)

HSP 1 Score: 134 bits (336), Expect = 2.360e-37
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 0
Query:   13 DVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKV 115
            D+VVG GA  +SG+ V VHYT   GS + G   DSSR RGRPF +    G VI GWD+GV  MRVGGRR L+IPPELGYGT GAGGVIPPNATL FD+ELL++
Sbjct:   91 DLVVGTGATPQSGNTVVVHYT---GSLEDGTKFDSSRDRGRPFSFPIGLGRVIKGWDEGVGTMRVGGRRKLIIPPELGYGTRGAGGVIPPNATLLFDVELLRI 190          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A1C0V7G9 (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V7G9_9CYAN)

HSP 1 Score: 134 bits (336), Expect = 2.790e-37
Identity = 68/108 (62.96%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            L  +D+ VG GAA   G  V VHYT TL     G+  DSSR RG+PF +R   G VI GWD+GV  MRVGGRR LVIPP+LGYG  GAGGVIPPNATL FD+ELL+VG
Sbjct:   93 LQYEDLTVGTGAAPTPGQNVTVHYTGTL---TDGKKFDSSRDRGQPFSFRIGVGQVIKGWDEGVLSMRVGGRRKLVIPPDLGYGARGAGGVIPPNATLVFDVELLRVG 197          
BLAST of Ggra6936.t1 vs. uniprot
Match: FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C20DA8B (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C20DA8B)

HSP 1 Score: 133 bits (334), Expect = 3.080e-37
Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            LM +D+ VG GA   SG  V VHYT TL   ++G+  DSSR R RPF +    G VI GWD+GV  MRVGGRR LVIPP+LGYG  GAGGVIPPNATL FD+EL++VG
Sbjct:   72 LMYEDLEVGTGALPTSGQAVTVHYTGTL---ENGEKFDSSRDRNRPFSFTIGVGQVIKGWDEGVATMRVGGRRKLVIPPDLGYGPRGAGGVIPPNATLIFDVELIRVG 176          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A1W7QU78 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Citrifermentans pelophilum TaxID=60036 RepID=A0A1W7QU78_9DELT)

HSP 1 Score: 130 bits (328), Expect = 3.540e-37
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 0
Query:    6 AAQLMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKV 115
            A+ L   D+V GNGAA  SG +V VHYT   G  ++G   DSS  RG+PF +R   G VI GWD+GV  M+VGG+R L+IPP+LGYG+AGAGGVIPPNATL FD+ELL V
Sbjct:    3 ASGLSYTDIVKGNGAAPTSGKMVTVHYT---GVLENGTKFDSSVDRGQPFSFRIGAGEVIPGWDEGVISMKVGGKRKLIIPPQLGYGSAGAGGVIPPNATLIFDVELLDV 109          
BLAST of Ggra6936.t1 vs. uniprot
Match: A0A6M0RYK9 (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A6M0RYK9_9CYAN)

HSP 1 Score: 133 bits (334), Expect = 3.770e-37
Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKVG 116
            LM +D+ VG GA    G  V VHYT TL   ++G+  DSSR R RPF +    G VI GWD+GV  MRVGGRR LVIPPELGYG  GAGGVIPPNATL FD+EL++VG
Sbjct:   79 LMYEDLEVGTGALPTQGQAVTVHYTGTL---ENGEKFDSSRDRNRPFSFTIGVGQVIKGWDEGVATMRVGGRRKLVIPPELGYGARGAGGVIPPNATLIFDVELIRVG 183          
BLAST of Ggra6936.t1 vs. uniprot
Match: K9SRT3 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SRT3_9SYNE)

HSP 1 Score: 132 bits (332), Expect = 4.370e-37
Identity = 63/107 (58.88%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    9 LMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRSRGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVIPPNATLYFDIELLKV 115
            L  Q++ +G GA  K G+ V VHY   +G+ ++G   DSSR R RPF +    G VI GWD+G++ MRVGGRR+L+IPPELGYG  GAGGVIPPNATL FD+ELLKV
Sbjct:   61 LKYQEITIGTGAIPKQGNKVTVHY---IGTLENGTKFDSSRDRNRPFDFNLGVGQVIKGWDEGLSTMRVGGRRILIIPPELGYGARGAGGVIPPNATLIFDVELLKV 164          
The following BLAST results are available for this feature:
BLAST of Ggra6936.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT812.490e-5978.07Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
A0A845YDB14.970e-3963.89Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symplo... [more]
U9W2689.620e-3862.96Peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptol... [more]
A0A2N5JQ571.400e-3759.09Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cyanob... [more]
A0A846FPW22.360e-3765.05Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cyanot... [more]
A0A1C0V7G92.790e-3762.96Peptidyl-prolyl cis-trans isomerase n=4 Tax=Limnot... [more]
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C20DA8B3.080e-3762.04FKBP-type peptidyl-prolyl cis-trans isomerase n=1 ... [more]
A0A1W7QU783.540e-3760.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Citrif... [more]
A0A6M0RYK93.770e-3762.04Peptidyl-prolyl cis-trans isomerase n=3 Tax=Leptol... [more]
K9SRT34.370e-3758.88Peptidyl-prolyl cis-trans isomerase n=1 Tax=Synech... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 22..113
e-value: 1.2E-29
score: 102.5
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 25..116
score: 28.635616
NoneNo IPR availableGENE3D3.10.50.40coord: 4..116
e-value: 1.8E-41
score: 143.4
NoneNo IPR availablePANTHERPTHR43811FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPAcoord: 6..115
NoneNo IPR availablePANTHERPTHR43811:SF30PEPTIDYLPROLYL ISOMERASEcoord: 6..115
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 9..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:179713..180194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6936.t1Ggra6936.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 179713..180194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6936.t1 ID=Ggra6936.t1|Name=Ggra6936.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=118bp
MSSAGAAQLMQQDVVVGNGAAFKSGDLVHVHYTLTLGSFDSGQVVDSSRS
RGRPFQYRYDTGSVISGWDQGVTGMRVGGRRLLVIPPELGYGTAGAGGVI
PPNATLYFDIELLKVGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom