Ggra6888.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6888.t1
Unique NameGgra6888.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length376
Homology
BLAST of Ggra6888.t1 vs. uniprot
Match: A0A2V3J6I6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 411 bits (1056), Expect = 1.270e-139
Identity = 204/353 (57.79%), Postives = 263/353 (74.50%), Query Frame = 0
Query:    2 VQSGQLDGSTVKTLVFVGHNAGHGLGDRLRGLLQAYLSAVMSNRLFLIHWQDPFPLSMIFTNNKISNFTYDESLFPTRSTV-GGKADVKRVRKATLEDIHFFYGSKGNQTKIMFVCEPPPSLDGLFKAVKKFPDLSTSRALSKVTPFKVPVLEEQFFPLIFKVLFKPSAGLRKLMMETINNHNRYEVSSLWKTGPLRRIDASRPFISLHVRLGFGLGEYNKRFEHQMEGQTIESVAHCLAHKALILAEQEGITNPPRFYLACDTAEFRLKLKKALLRINSRTQVMYGRWDIKHVRDMVERTKYDLRLLMYTFADLYVLSKGQSILRSNSGFSKLAMWMGAIPSEMYYDIYNDC 353
            V+ G+LDGS+V+TLVFVG+   HGLGDRLRG+L AYL+AV SNRL LIHWQDPFPLS +  N+  SN+TYD SLFP+R+   GG+ D   V+KATL ++H F G       ++  CEP PSLD +FKA++KFP L TS A+ K+ P +      QFFPLIFK L +PSA LRK+M E I+ HNR+  S LWK GPL+RID  +PFIS+H RLG+G+ EY KRF+ QM G+T+ESVA C+A  A+ LA++E +T+PPRFYLA DT +FRL  K AL+R++ + +VMYG W +KHV++M   T  DLRL  YTF DLY++SKG++ILRSNSGF  LA+WMG IPS+M ++I NDC
Sbjct:   27 VREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVHSNYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGI---HRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYIKRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNI-NDC 375          
BLAST of Ggra6888.t1 vs. uniprot
Match: A0A2V3J6A2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 166 bits (419), Expect = 3.140e-43
Identity = 119/337 (35.31%), Postives = 179/337 (53.12%), Query Frame = 0
Query:   11 TVKTLVFVGHNAGHGLGDRLRGLLQAYLSAVMSNRLFLIHWQDPFPLSMIFTNNKISNFTYDESLFPTRSTVGGKADVKRVRKATLEDIHFFYGSKGNQTKIMFVCEPPPSLDG-LFKAVKK-FPDLSTSRALSKVTPFKVPVLEEQFFPLIFKVLFKPSAGLRKLMMETINNHNR-YEVSSLWKTGPLRRIDASRP-FISLHVRLGFGLGEYNKRFEHQMEGQTIESVAHCLAHKALILAEQEGITNPPRFYLACDTAEFRLKLKKALLRINSRTQVMYGRWDIKHVRDMVERTKYDLRL--LMYTFADLYVLSKGQSILRSNSGFSKLAMWMGAI 341
            T+  LV+      +G+GD +RGLL +YL AV+S R+F I  + PFPLSM+ T+    NFTYD  LFP  S+      ++ +RK+    I+F             V E    LD  LF  + + +P L  S+ L + + F  P  EE   P I K LF PS  LR L+    N  N  + +S+L+            P +IS+H R+G+G  E   RF  + +G T ES+A C+A  A+ +A+Q  + +P  F+++ DT  FR   K  + R+    +V    W   H+ + V R++   ++   M T+ D+Y+LSKG+S+L   SGFS +A+WMGAI
Sbjct:  100 TIPKLVYRSMRRNYGVGDVIRGLLHSYLIAVISKRMFFIDVERPFPLSMVLTSPNGYNFTYDRYLFPELSSY---EHIQWLRKS----IYFDKLDTALSDTPTLVDESQTVLDWELFLIIPRLYPQLEISKKLPQSSGFS-PTREE-VIPFILKALFCPSPELRSLLPGQENTDNLVWPLSTLFSPDQNLLWRNEMPAYISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPHHFFISSDTDHFRTLFKTEVNRLRPSAKVYQSNWQAVHM-NRVGRSQSPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAI 426          
BLAST of Ggra6888.t1 vs. uniprot
Match: A0A2V3IP43 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP43_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 1.030e-29
Identity = 104/350 (29.71%), Postives = 166/350 (47.43%), Query Frame = 0
Query:    1 MVQSGQLDGSTVKTLVFVGHNAGHGLGDRLRGLLQAYLSAVMSNRLFLIHWQDPFPLSMIFTNNKISNFTYD-ESLFPTRSTVGGKA---DVKRVRKATLEDIHFFYGSKGNQTKIMFVCE-PPPSLDGLFKAVKKFPDLSTSRALSKVT-PFKVPVLEEQFFPLIFKVLFKPSAGLRKLMMETINNHNRYEVSSLWKTGPLRRIDASRPFISLHVRLGFGLGEYNKRFEHQMEGQTIESVAHCLAHKALILAEQEGITNPPRFYLACDTAEFRLKLKKALLRINSRTQVMYGRWDIKHVRDMVERTKYDLRLLMYTFADLYVLSKGQSILRSNSGFSKLAMWMGAIPSE 344
            ++ S  L  STVK L+F G     GLGDRLR L ++YL+AV+++RLFLI  +     S + ++ +  NF +D   L+ + +    K     +K VR  T  D+  F     ++T ++ V +        L KA  +        A + +  PF  P   E   P +  V+F+P+   R+ +   I +H           G   R     P+IS+H R+G    E   RF       T +S+A C+A    + A    I+ P  F+++ DT  FR  L++ + + + +  V +G W+  H+R++  +   D   LM  FAD+Y LS G  I    SGF+ LA W G++  E
Sbjct:   79 ILDSQPLHKSTVKVLIFRGMAKNLGLGDRLRALARSYLTAVLTDRLFLIDLELYNSFSSVLSSPEGFNFGFDLRKLYISDTKNRNKMLPPQMKVVRNYTQNDLSVFL----SETPVIVVDDYHGTDCRELCKAGTQMVSSKIKDAFNNMRKPF--PKCAE-IMPFVMNVVFRPTKKFRRYIKH-IESH----------LGENSRA----PYISIHARIGISFNETGSRFNLTEHRLTEKSLATCMARNVFLEAYLRNISVPFTFFISTDTPPFRKTLEQEIHKFDRKANVFFGSWEPFHIRNLKNKEPSDEEKLMNIFADIYFLSHGVFIFHIPSGFANLAKWFGSMTME 406          
BLAST of Ggra6888.t1 vs. uniprot
Match: A0A2V3ILT8 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 3.570e-16
Identity = 95/329 (28.88%), Postives = 136/329 (41.34%), Query Frame = 0
Query:   25 GLGDRLRGLLQAYLSAVMSNRLFLIHWQDPFPLSMIFTNNKIS---NFT----YDESLFPTRSTVGGKADVKRVRKA-TLEDIHFFYGSKGNQTKIMFVCEPPPSLDGLFKAVKKFPDLSTSRALSKVTPFKVPVLEEQFFPLIFKVLFKPSAGLRKLMMETINNHNRYEVSSLWKTGPLRRIDASRPFISLHVRLGFGLGEYNKRFEHQMEGQTIESVAHCLAHKALILAEQEGITNPPRFYLACDTAEFRLKLKKALLRINSRTQVMYGRWD-IKHVRDMVERTKYDLRLLMYTFADLYVLSKGQSILRSNSGFSKLAMWMGAIPSE 344
            G+GDR   L+ A++ A  SNR+ L+ W  P+PLS  F+ +       FT     +E    +   +  K   K++     L   HF    +G  T        P  L   F      P L  S+  + +T     V         F  + KP+A L+KL+ +                   R+    +PFI +H RLG GLGE   RF     G + E VA C    AL   +  GI    ++YLA DT  FR   +  LLR   R      R+D I  V    +  K +      T  +L VLSK   I+ S S FS++A ++G +  E
Sbjct:  136 GVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFTDADRREEQQKASSRYICDKQCTKKLHLGHVLGSKHFIIYPQGATTS-------PQHLVAHFSTTH--PRLPLSKVFANLTDV---VTNVHVLSSAFNAMLKPAAPLKKLLEK-------------------RKRALKQPFIGVHARLGAGLGETGPRFG---SGHSPEQVAKCFVKSALGSGDTHGIR---KYYLATDTVPFRDVFENVLLR--ERPNASLIRFDDIMPVH--TKGCKNNASECASTMMELIVLSKSSYIVASKSSFSRVAGYIGNVTVE 423          
The following BLAST results are available for this feature:
BLAST of Ggra6888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6I61.270e-13957.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6A23.140e-4335.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP431.030e-2929.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT83.570e-1628.88Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 196..358
e-value: 7.4E-9
score: 37.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:847309..848436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6888.t1Ggra6888.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 847309..848436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6888.t1 ID=Ggra6888.t1|Name=Ggra6888.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=376bp
MVQSGQLDGSTVKTLVFVGHNAGHGLGDRLRGLLQAYLSAVMSNRLFLIH
WQDPFPLSMIFTNNKISNFTYDESLFPTRSTVGGKADVKRVRKATLEDIH
FFYGSKGNQTKIMFVCEPPPSLDGLFKAVKKFPDLSTSRALSKVTPFKVP
VLEEQFFPLIFKVLFKPSAGLRKLMMETINNHNRYEVSSLWKTGPLRRID
ASRPFISLHVRLGFGLGEYNKRFEHQMEGQTIESVAHCLAHKALILAEQE
GITNPPRFYLACDTAEFRLKLKKALLRINSRTQVMYGRWDIKHVRDMVER
TKYDLRLLMYTFADLYVLSKGQSILRSNSGFSKLAMWMGAIPSEMYYDIY
NDCGEQARVHDVLERFFQQKRSAPS*
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