Ggra6876.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6876.t1
Unique NameGgra6876.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length260
Homology
BLAST of Ggra6876.t1 vs. uniprot
Match: A0A1X6NL88 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL88_PORUM)

HSP 1 Score: 114 bits (286), Expect = 8.030e-26
Identity = 93/281 (33.10%), Postives = 133/281 (47.33%), Query Frame = 0
Query:    1 MKVSPATALRRQNIELPVATCFTALPFRGHLVYDGIIYG-------AQGAKLSAAKKKTLLERCRAAKAVGNVITGF--HVKAPPKKASVPAVDVNNMGTKQLKEFVLQRGGSISDCVEKSDLVS-----------RALSVSDKPAQAEGSQKQ------LNKEQKAQVERLKKLDKMEEM-VVFRRWGYTEESNSAH------MVTILHGASFIGMFRSENLVPSATEIVDELLKVMEKRGKIFSMVAVDDKETADAVNLVTKEAGIHTGFYPPPSAEEQ 248
            ++VSPATAL R    LP  T  TALPFRG LVYDG++ G       AQ A+L AA +  L        A G VITG      AP     V   D++ M   QLK  +   G S S   +K  LV+           R     +  A AEGS +Q      L+  + A V RL+   +  +  V+F++       + AH      +     GA+ +  F     VP+  E+++ LL  + +   +  +V+VD++  A AV  VT+ AG+ T +YPPPS EE+
Sbjct:  148 LRVSPATALTRAGFTLPFQTRLTALPFRGVLVYDGLVSGRPVPVRGAQAARLEAAYEAAL--------AAGTVITGLIPSASAPXXXXXVRTDDLHAMSVPQLKAHLTAMGVSASHSFDKVTLVTMVAAERLTAAARRADTGEGSANAEGSMRQPVDEADLSPSEAAAVARLRLFPRRNKTAVIFKQVALHSGDDVAHPAAPHTVAVFFGGAAPLFSFSGAAPVPTTAELLEHLLDAVNRCRFVPELVSVDNRAAAAAVERVTRHAGVQTTYYPPPSVEER 420          
BLAST of Ggra6876.t1 vs. uniprot
Match: A0A7S0XT14 (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XT14_HEMAN)

HSP 1 Score: 64.3 bits (155), Expect = 3.860e-8
Identity = 69/253 (27.27%), Postives = 99/253 (39.13%), Query Frame = 0
Query:    9 LRRQNIELPVATCFTALPFRGHLVYDGIIYGAQGAKLSA--AKKKTLLERCRAAKAVGNVITGFHVKAPPKKASVPAVDVNNMGTKQLKEFVLQRGGSISDCVEKSDLVSRALSVSDKPAQAEGSQKQLNKEQKAQVERLKKLDKMEE---MVVFRRWGYTEESNSAHMVTILHGASF-IGMFRSENLVPSATEIVDELLKVMEKRGKIFSMVAVDDKETADAVNLVTKEAGIHTGFYPPPSAEEQTFSTMMG 255
            L R  + LPV    T LPFRG +VYDG++ G  G    A  ++   +L     A++ G V++      P  +    A             F  +  G      E  + V  +                 NK +KA V+ +K L KM       V RR+ YTE  N  HMV  L G    +G F+S  L P+A E++  L K  +    + +  A D       V    +  G+   +Y P   EE   ST  G
Sbjct:  294 LVRMGMTLPVKIKLTLLPFRGRIVYDGLMAGENGPPEQAKGSRAAEILAAVEEAESNGAVVSNISAVGPLHEDYGIAA-----------AFARKAAGDAEASEEAEEKVPLS-----------------NKTKKA-VKGIKDLPKMPMPGGYWVARRFAYTEAENPNHMVIFLSGTGHTLGGFQSAALEPTAEELLCNLAKTAKVAKCVPTAFAHDSAPAMAGVRQALRGFGVRADYYVPAPVEETGDSTQPG 517          
The following BLAST results are available for this feature:
BLAST of Ggra6876.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1X6NL888.030e-2633.10Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XT143.860e-827.27Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 81..135
e-value: 1.7E-5
score: 26.1
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 84..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:801616..802395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6876.t1Ggra6876.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 801616..802395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6876.t1 ID=Ggra6876.t1|Name=Ggra6876.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=260bp
MKVSPATALRRQNIELPVATCFTALPFRGHLVYDGIIYGAQGAKLSAAKK
KTLLERCRAAKAVGNVITGFHVKAPPKKASVPAVDVNNMGTKQLKEFVLQ
RGGSISDCVEKSDLVSRALSVSDKPAQAEGSQKQLNKEQKAQVERLKKLD
KMEEMVVFRRWGYTEESNSAHMVTILHGASFIGMFRSENLVPSATEIVDE
LLKVMEKRGKIFSMVAVDDKETADAVNLVTKEAGIHTGFYPPPSAEEQTF
STMMGHMVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036361SAP_dom_sf