Ggra6872.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6872.t1
Unique NameGgra6872.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length372
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6872.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 38..149
e-value: 3.3E-8
score: 43.3
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 35..145
e-value: 1.7E-11
score: 44.3
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 38..105
score: 13.570437
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 7..148
e-value: 6.4E-15
score: 57.3
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 17..146
NoneNo IPR availableCDDcd18186BTB_POZ_ZBTB_KLHL-likecoord: 37..103
e-value: 1.9677E-8
score: 49.0894

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:729956..731071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6872.t1Ggra6872.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 729956..731071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6872.t1 ID=Ggra6872.t1|Name=Ggra6872.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=372bp
MALSDLYTKDQYYEPNHDEFRRHTFGTLYHSRIARDLSDVSLLTSDGKKR
PAFRALLAGCSKYFYKLFVSNPGATEKQEVSVDVTDTVLLEVLTFAYAGH
CNLLTAILSHTTQFSARELNELMQLRKAAKDYGMHPLYEWCDSTLHRLYR
ESPRFACNILQSMIDHGEHNDDSRKHVISFIVKNHMQSFHVCENHSEPSC
RREKDFVGCRSRTHFHRCSYWGIHALEPRTLDDVFENFDMNLIRRARATL
PGTTESLFTAILFWMTDGCLLPCDLRTVPLQTTSSKLDNVKDTCYCRTDE
GSLTALDSFADAYAIDFEVPDEKKIFFVDENRFAWGKKLAARLDINRVSS
EYKHEVLFATGLVDKCQRSNY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ_sf