Ggra6869.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A2V3ILK7 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILK7_9FLOR) HSP 1 Score: 184 bits (466), Expect = 9.010e-58 Identity = 94/128 (73.44%), Postives = 102/128 (79.69%), Query Frame = 0
Query: 1 MATGKRKRQQAKLDVESRSGFTNAAAPLGVVDTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNPK 128
M TGKRKR+QAKLD ++RSGF + APLGVVDT K +FDVGPLSVL AV+N+ VLINVRNNKKLLA VKAFDRHCNMVLTNVTEIWYEY K+ RTISKMFLRGDSVILVLLNPK
Sbjct: 1 MVTGKRKREQAKLDKDTRSGFNDPDAPLGVVDTGKADEFDVGPLSVLKKAVVNETAVLINVRNNKKLLARVKAFDRHCNMVLTNVTEIWYEYPKTAKGGKTQRVEKTRTISKMFLRGDSVILVLLNPK 128
BLAST of Ggra6869.t1 vs. uniprot
Match: R7QQD6 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQD6_CHOCR) HSP 1 Score: 144 bits (362), Expect = 6.300e-42 Identity = 79/129 (61.24%), Postives = 92/129 (71.32%), Query Frame = 0
Query: 1 MATGKRKRQQAKL-DVESRSGFTNAAAPLGVVDTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNPK 128
M+ GKRKR + KL V++R+GF++ A G+VDT K DF VGPLSVL AV D VLIN+R+NKKLLA VKAFDRHCNM+L +VTEIW E+ K R ISKMFLRGDSVILVLLNPK
Sbjct: 1 MSAGKRKRDREKLAPVDNRAGFSSLDAVPGMVDTDKIDDFQVGPLSVLKRAVEQDIQVLINLRSNKKLLARVKAFDRHCNMILQHVTEIWVEHHKGPNGGKPQRLEKTRVISKMFLRGDSVILVLLNPK 129
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A7S0BTF8 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BTF8_9RHOD) HSP 1 Score: 125 bits (313), Expect = 1.430e-34 Identity = 65/112 (58.04%), Postives = 75/112 (66.96%), Query Frame = 0
Query: 16 ESRSGFTNAAAPLGVVDTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNP 127
++R+GFTN P G+VDT K +F GP SVL +V ++ VLIN RNNKKLL VKAFDRH NM+L NV E+W EY KS R ISKMFLRGDSVILVL NP
Sbjct: 10 DTRAGFTNPDKPTGLVDTEKVDEFATGPFSVLTQSVKDNKQVLINCRNNKKLLGRVKAFDRHMNMILENVKEMWIEYPKSSKGGKARPVNKDRFISKMFLRGDSVILVLRNP 121
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A7S0ZFB3 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFB3_9RHOD) HSP 1 Score: 115 bits (288), Expect = 9.720e-31 Identity = 64/113 (56.64%), Postives = 76/113 (67.26%), Query Frame = 0
Query: 15 VESRSGFTNAAAPLGVVDTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNP 127
V++RSG + LGVVDT K +F+ GPLSVL V ++ VLIN+R+N+KLLA VKAFDRH NMVL +V E+W E KS R ISKMFLRGDSVILVL NP
Sbjct: 12 VDNRSGVGDPDQILGVVDTEKAEEFEKGPLSVLVECVKHELQVLINLRSNRKLLAKVKAFDRHFNMVLEDVKEMWIETPKSSQGRKAKPIHKDRYISKMFLRGDSVILVLKNP 124
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A7S3XJ52 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XJ52_OXYMA) HSP 1 Score: 112 bits (281), Expect = 1.120e-29 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 35 KQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNPK 128
++ +FDVGPLSVL NAV ++ +LIN RNN+KLLA VKAFDRHCNMVL V EIW E + R ISK+FLRGDSVILVLLNPK
Sbjct: 32 EKDNFDVGPLSVLQNAVKENSQILINCRNNRKLLARVKAFDRHCNMVLEQVREIWTEVPRGSGKKKGKAVNKDRFISKLFLRGDSVILVLLNPK 125
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A016WCC7 (Small nuclear ribonucleoprotein Sm D2 n=15 Tax=Strongylida TaxID=6308 RepID=A0A016WCC7_9BILA) HSP 1 Score: 112 bits (280), Expect = 1.460e-29 Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = 0
Query: 35 KQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXX-RTISKMFLRGDSVILVLLNP 127
+Q +F+VGPLS+LNN+V N+A VLIN RNNKKLL VKAFDRHCNMVL NV E+W E K+ R ISKMFLRGDSVILVL NP
Sbjct: 24 EQEEFNVGPLSILNNSVKNNAQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEQPKTGKGKKKAKAVPKDRFISKMFLRGDSVILVLKNP 117
BLAST of Ggra6869.t1 vs. uniprot
Match: M2XQW5 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQW5_GALSU) HSP 1 Score: 110 bits (275), Expect = 7.650e-29 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 0
Query: 16 ESRSGFTNAAAPLGVVDTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNPK 128
++RSG + PLG+VDT K +F GPLS+L + V + VLINVRN+KKLL VKAFDRH NM+L NV EIW E KS R I KMFLRGDSV+LVL P+
Sbjct: 10 DTRSGMGDPNQPLGIVDTVKSEEFSQGPLSLLVDCVKDGTPVLINVRNSKKLLGKVKAFDRHFNMILENVKEIWTEIPKSKKARPVNKD---RFIPKMFLRGDSVVLVLKAPQ 119
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A368GHL7 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368GHL7_ANCCA) HSP 1 Score: 112 bits (280), Expect = 8.450e-29 Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = 0
Query: 35 KQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXX-RTISKMFLRGDSVILVLLNP 127
+Q +F+VGPLS+LNN+V N+A VLIN RNNKKLL VKAFDRHCNMVL NV E+W E K+ R ISKMFLRGDSVILVL NP
Sbjct: 87 EQEEFNVGPLSILNNSVKNNAQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEQPKTGKGKKKAKAVPKDRFISKMFLRGDSVILVLKNP 180
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A336MLW6 (Small nuclear ribonucleoprotein Sm D2 n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MLW6_CULSO) HSP 1 Score: 110 bits (275), Expect = 9.100e-29 Identity = 57/93 (61.29%), Postives = 64/93 (68.82%), Query Frame = 0
Query: 35 KQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNP 127
+Q +FD GPLSVL +V N+ VLIN RNNKKLL VKAFDRHCNMVL NV E+W E ++ R ISKMFLRGDSVILVL NP
Sbjct: 26 EQEEFDTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPRTGKGKKAKPVNKDRFISKMFLRGDSVILVLRNP 118
BLAST of Ggra6869.t1 vs. uniprot
Match: A0A7S2R8G0 (Small nuclear ribonucleoprotein Sm D2 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8G0_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.080e-28 Identity = 65/114 (57.02%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 19 SGFTNAAAPLGVV-----DTAKQHDFDVGPLSVLNNAVLNDAVVLINVRNNKKLLANVKAFDRHCNMVLTNVTEIWYEYAKSXXXXXXXXXXXXRTISKMFLRGDSVILVLLNP 127
+GF+ A A + +T + DF GPLSVL ++V N++ VLINVRNN KLLA VKAFDRHCNMVL NV EIW E KS R ISKMFLRGDSVILVL NP
Sbjct: 17 AGFSRAMASIDDKRTLDGETKAEEDFSTGPLSVLMHSVKNNSQVLINVRNNHKLLARVKAFDRHCNMVLENVKEIWTETPKSGKGKAKPMNKE-RHISKMFLRGDSVILVLKNP 129 The following BLAST results are available for this feature:
BLAST of Ggra6869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6869.t1 ID=Ggra6869.t1|Name=Ggra6869.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=129bpback to top |