Ggra6858.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6858.t1
Unique NameGgra6858.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
BLAST of Ggra6858.t1 vs. uniprot
Match: M2W6D5 (Palmitoyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W6D5_GALSU)

HSP 1 Score: 89.7 bits (221), Expect = 3.950e-17
Identity = 71/243 (29.22%), Postives = 112/243 (46.09%), Query Frame = 0
Query:   29 YIALTLSLLLCATLVYARVLLPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLY--------ARARRADALFAAAVGGAALAIALGSLCAWNAFLLATAQTTVEWLEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGT 263
            Y+ L  SL +   + Y   LLP++ ++   P   LH   S  LL ++L NY +C+LTPPG P  P   ++      G          RFC  C   KPPRAHHC++C  C  R               NY +F  F+     G+  A+AT + +         + +R A       +   ++AI+L  L +W+ +L+AT+QTT+E+ E    +R ++   A  R+   +  G   N+   FG+
Sbjct:   37 YVFLCSSLTVSVAVAYFWFLLPVLLQSLGKPFVSLHIVLSIVLLFNILFNYIMCMLTPPGEP--PTQKLISGTEYAGI-------HLRFCRKCGCIKPPRAHHCSICQKCVLRMDHHCPWINGCVGFRNYRYFLLFLFYLFLGALYATATVSYMLFVPGFFTSSFSREAKVAVYIFILCLSVAISLFILLSWHLYLIATSQTTIEFYENREKKRNSNM--ASRRYIHEYDIGFYHNLKTIFGS 268          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A7S0VRW7 (Palmitoyltransferase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VRW7_9CRYP)

HSP 1 Score: 70.1 bits (170), Expect = 3.530e-10
Identity = 67/231 (29.00%), Postives = 101/231 (43.72%), Query Frame = 0
Query:   64 HTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRW-----RFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRADALFAAA--------VGGAALAIALGSLCAWNAFLLATAQTTVEWLEGVALRRRADAPPAWGR-FAGPFHRGLRRNVDDAFGTVPSRFAP--WWLVLVLP 278
            +   +A+L  +V  NY + +LTPPG    P  +  P P    +   +R ++      R+C  C + KPPR HHC++      +  XXX          NY  FF F+     G     AT+A  + +  R     A          +   +++IA+G L  W+ +L+ATAQTT+EW      R R D     GR +A  +  G   N     G+ P  FA   W+L  + P
Sbjct:   45 YVIVAAWLTFNVFWNYLVTILTPPG--GVPHDYEDPLPRDPESQLDMREEKHPDGFKRWCKKCRKPKPPRTHHCSVXXXXVLKMDXXXPWVSNCVGWKNYRTFFLFMAYLWVGCLYVMATSAPTFFKHIRTRGPIAQGHTYVVMSFILAFSVSIAVGMLLGWHVYLVATAQTTIEWYGN---RMRGDEARKQGRVWANEWDVGWLENTAMVLGSSPDPFAVHMWFLPTLRP 270          
BLAST of Ggra6858.t1 vs. uniprot
Match: palmitoyltransferase ZDHHC16B n=1 Tax=Thunnus maccoyii TaxID=8240 RepID=UPI001C4BBEFA (palmitoyltransferase ZDHHC16B n=1 Tax=Thunnus maccoyii TaxID=8240 RepID=UPI001C4BBEFA)

HSP 1 Score: 69.3 bits (168), Expect = 9.690e-10
Identity = 77/257 (29.96%), Postives = 109/257 (42.41%), Query Frame = 0
Query:   49 LPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA--------------------DALFAAAVGGAALAIALGSLCAWNAFLLATAQTTVEWLEGVALRRRADAPPAWGR-FAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPS 284
            LP+I  T+     + H     +LL+ V+ NY     T PG P     HI                    C  C   KPPR HHC++CN C  + XXXXXXXXXXX   N+ +FF F L    G    S ++  ++  A  A                     ++    V  +++AIALG L  W+ FL++  +T+VE       R+      A G+ F  PFH G   N    FG    + + W   ++LP   LP+
Sbjct:  112 LPIILSTYPVYWVIWHLCCGHWLLVMVVFNYYKATTTSPGHPPKDKVHIPSV---------------SICKKCITPKPPRTHHCSICNTCVLKMXXXXXXXXXXXGHFNHRYFFSFCLYMTLGCMYCSISSRDMFMEAYSAVETYYQTPPPPFTFRETTAHKSIIFLWVLTSSVAIALGGLTLWHTFLISRGETSVERHIN---RKETKRLKAKGKVFRNPFHHGKINNWKILFGV--EKRSHWLTRVLLPSSHLPN 348          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A3B4TV19 (Palmitoyltransferase n=5 Tax=Carangiformes TaxID=1489907 RepID=A0A3B4TV19_SERDU)

HSP 1 Score: 67.0 bits (162), Expect = 4.940e-9
Identity = 76/260 (29.23%), Postives = 107/260 (41.15%), Query Frame = 0
Query:   48 LLPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA----------DALFAAAVGG----------AALAIALGSLCAWNAFLLATAQTTVEW----LEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLP 283
            +LP I  T+     + H     +LL+ V+ +Y     T PG P     HI                    C  C   KPPR HHC++CN C  +  XXXXXXXXXX   N+ +FF F L    G    S ++  L+  A  A          D  F                +++A+ALG L  W+A L++  +T+VE      E   LR +         F  P+HRG   N    FG    + + W+  ++LP   LP
Sbjct:   76 ILPTIISTYPVHWVMWHLCCGHWLLVMVVFHYYKATTTSPGHPPKDKIHIPSV---------------SICKKCITPKPPRTHHCSICNMCVLKMDXXXXXXXXXXGHFNHRYFFSFCLYMTLGCIYCSVSSRDLFLEAYSAIESYYQTPPPDYTFKETTAHKSVIFLWVLTSSVAVALGGLTLWHAILISRGETSVERHINRKETKRLREKGKV------FRNPYHRGKMNNWRLLFGV--EKRSHWFTQVLLPSSHLP 312          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A667YD94 (Palmitoyltransferase n=4 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YD94_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 5.900e-9
Identity = 69/267 (25.84%), Postives = 106/267 (39.70%), Query Frame = 0
Query:   48 LLPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA--------------------DALFAAAVGGAALAIALGSLCAWNAFLLATAQTTVE-WLEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPSAFPPGLDEV 293
            LLP+I  ++     + H     +LLL V+ +Y   + T PG P            PK  A +        C  C   KPPR HHC++C+ C  +               N+ +FF F L    G    S ++ +++  A  A                     ++    V  +++A+ALG L  W+A L++  +T+VE  +     RR  ++      F  PFH+G   N    FG         WL  VL    LPS+ PP  D +
Sbjct:  114 LLPIILSSYPVHWIVWHLCCGHWLLLMVVFHYYKAISTSPGHP------------PKDRADLPSVS---ICKKCIVPKPPRTHHCSICDTCILKMDHHCPWLNNCVGHFNHRYFFSFCLYMMLGCIYCSISSREMFIDAYNAIESYYQTPPPLYTFRERTAHKSIIFLWVLTSSVAVALGGLTLWHAVLISRGETSVERHINRKEARRLQESGKV---FRNPFHQGRMNNWKILFGVEKRSH---WLTRVL----LPSSHPPSGDGI 355          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A0P1A991 (Palmitoyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A991_PLAHL)

HSP 1 Score: 65.5 bits (158), Expect = 2.080e-8
Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 0
Query:  117 FCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQL------YARARR----------ADALFAAAVGGAALAIALGSLCAWNAFLLATAQTTVEWLEGVALRRRADAPPAWGRF-AGPFHRG-LRRNVDDAFGTVPSRFAPWWLVLVLPLPRLP 283
            +C  C   +P RAHHC++C+ C A              R+NY +FF F++  A G+  A+  + ++      Y +  R          A  L  A    +++A+A+  L  W+AFL+ATAQT+VEW     ++R++    + G   A P+  G +  N +  FG    +     ++ +LP  RLP
Sbjct:  183 YCRRCRHFRPGRAHHCSVCDRCVAHLDHHCPWVNNCIGRNNYRYFFSFLVWLAVGAYYATYMSYRIAYTGLSYQQFSRLLVIFEANSAATVLTLAFTTSSSVAVAITVLATWHAFLIATAQTSVEW----QIKRKSKNKRSHGGITASPYSSGSIHGNWELVFGRCNLK-----ILALLPSTRLP 358          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A484C8E9 (Palmitoyltransferase n=8 Tax=Percidae TaxID=8165 RepID=A0A484C8E9_PERFV)

HSP 1 Score: 65.1 bits (157), Expect = 2.580e-8
Identity = 76/260 (29.23%), Postives = 111/260 (42.69%), Query Frame = 0
Query:   49 LPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA-----------DALFAAA---------VGGAALAIALGSLCAWNAFLLATAQTTVEW----LEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPS 284
            LP I RT+  P  + H     +LLL V+ +Y     T PG P            PKG   +        C  C   KPPR HHC++CN C  +  XXXXXXXXXX   N+ +F  F L    G    S+++ +L+  A  A           DA+             V  +++A+ALG L  W+  L++  +++VE      E   LR +         F  P+H G   N     G    + + W+  ++LP   LP+
Sbjct:  112 LPTILRTYPLPWVVWHLCCGHWLLLMVVFHYYKATTTSPGHP------------PKGKVHIPSVS---MCKKCIAPKPPRTHHCSICNTCVLKMDXXXXXXXXXXGHFNHRYFLSFCLYMTLGCIYCSSSSKELFLEAYSAIERYYQTPPPPDAVQETTAYKSIIFLWVLTSSVAVALGGLTLWHVILISRGESSVERHINKKEITRLREKGKV------FKNPYHHGTINNWKLLLGV--EKRSHWFTRVLLPSSHLPN 348          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A672FBZ7 (Palmitoyltransferase n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FBZ7_SALFA)

HSP 1 Score: 65.1 bits (157), Expect = 2.670e-8
Identity = 75/257 (29.18%), Postives = 109/257 (42.41%), Query Frame = 0
Query:   49 LPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA--------------------DALFAAAVGGAALAIALGSLCAWNAFLLATAQTTVE-WLEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPS 284
            LP I RT+ A     H     +LL+ V+ +Y     T PG P            PK     I       C  C   KPPR HHC++CN C  +  XXXXXXXXXX   N+ +FF F +    G    S ++  L+  A  A                     ++    V  +++A+ALG L  W+A L++  +T+VE  +     +R+ +       F  PFH G   N    FG    + + W+  ++LP   LP 
Sbjct:  109 LPTILRTYPAHWIAWHLCCGHWLLVMVVFHYYKATTTAPGHP------------PKDK---INIPSVSICKKCITPKPPRTHHCSICNVCVLKMDXXXXXXXXXXGHFNHRYFFSFCIYMTLGCIYCSISSRNLFLDAYNAIETYYQTPPPDFTLRETTAHKSIIFLWVLTSSVAVALGGLTLWHAILISRGETSVERHINRKETKRQKEKGKV---FRNPFHHGKMNNWKLLFGV--EKKSHWFTRVLLPSTHLPG 345          
BLAST of Ggra6858.t1 vs. uniprot
Match: palmitoyltransferase ZDHHC16B isoform X1 n=3 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A9A014F (palmitoyltransferase ZDHHC16B isoform X1 n=3 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A9A014F)

HSP 1 Score: 65.1 bits (157), Expect = 2.970e-8
Identity = 76/261 (29.12%), Postives = 109/261 (41.76%), Query Frame = 0
Query:   48 LLPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA----------DALFAAAVGG----------AALAIALGSLCAWNAFLLATAQTTVE----WLEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPS 284
            +LP I  T+     + H +   +LLL V+ +Y     T PG P     HI                    C  C   KPPR HHC++CN C  +  XXXXXXXXXX   N+ +FF F L    G    S ++  L+  A  A          D  F  +             +++A+ALG L  W+A L++  +T+VE      E   L+ +  A      F  P H G   N    FG    + + W+  ++LP   LP+
Sbjct:  161 ILPTIVGTYPLHWVVWHLSCGHWLLLMVVFHYYKATTTSPGHPPKEKIHIPSV---------------SICKKCITPKPPRTHHCSICNMCVLKMDXXXXXXXXXXGHFNHRYFFSFCLYMTLGCIYCSVSSRNLFLEAYSAIESYYQTPPPDYTFRESTAHKSVIFLWVLTSSVAVALGGLTLWHALLISRGETSVERHINCKETKRLKEKGKA------FRNPHHHGRMTNWKLLFGV--EKRSHWFTRVLLPSSHLPN 398          
BLAST of Ggra6858.t1 vs. uniprot
Match: A0A6P7I688 (Palmitoyltransferase n=10 Tax=Ovalentaria incertae sedis TaxID=1489909 RepID=A0A6P7I688_9TELE)

HSP 1 Score: 64.7 bits (156), Expect = 3.470e-8
Identity = 74/257 (28.79%), Postives = 107/257 (41.63%), Query Frame = 0
Query:   49 LPLIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPAPAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARXXXXXXXXXXXXXRDNYPFFFRFVLSAAAGSALASATAAQLYARARRA----------DALFAAAVGG----------AALAIALGSLCAWNAFLLATAQTTVE-WLEGVALRRRADAPPAWGRFAGPFHRGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPS 284
            LP I  +++    + H     +LL+ V+ +Y     T PG P     HI                    C  C   KPPR HHC++CN C  +  XXXXXXXXXX   N+ +FF F L    G    S ++  L+  A  A          D  F                +++A+ALG L  W+A L++  +T+VE  +     RR  +       F  P+H G   N    FG    + + W+  ++LP   LPS
Sbjct:  112 LPTILSSYAVHWIVWHLCCGHWLLIMVVFHYYRATTTSPGHPPKDKIHIPSV---------------SICKKCITPKPPRTHHCSICNICVLKMDXXXXXXXXXXGHFNHRYFFSFCLYMTLGCIYCSISSRDLFLEAYNAIESYYQTPPPDYTFRETTAHKSVIFLWVLTSSVAVALGGLTLWHAILISRGETSVERHINRKEARRLKENGKV---FRNPYHSGKMNNWKLLFGV--EKRSHWFTRVLLPSSHLPS 348          
The following BLAST results are available for this feature:
BLAST of Ggra6858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2W6D53.950e-1729.22Palmitoyltransferase n=1 Tax=Galdieria sulphuraria... [more]
A0A7S0VRW73.530e-1029.00Palmitoyltransferase n=1 Tax=Hemiselmis tepida Tax... [more]
palmitoyltransferase ZDHHC16B n=1 Tax=Thunnus maccoyii TaxID=8240 RepID=UPI001C4BBEFA9.690e-1029.96palmitoyltransferase ZDHHC16B n=1 Tax=Thunnus macc... [more]
A0A3B4TV194.940e-929.23Palmitoyltransferase n=5 Tax=Carangiformes TaxID=1... [more]
A0A667YD945.900e-925.84Palmitoyltransferase n=4 Tax=Myripristis murdjan T... [more]
A0A0P1A9912.080e-828.65Palmitoyltransferase n=1 Tax=Plasmopara halstedii ... [more]
A0A484C8E92.580e-829.23Palmitoyltransferase n=8 Tax=Percidae TaxID=8165 R... [more]
A0A672FBZ72.670e-829.18Palmitoyltransferase n=2 Tax=Salarias fasciatus Ta... [more]
palmitoyltransferase ZDHHC16B isoform X1 n=3 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A9A014F2.970e-829.12palmitoyltransferase ZDHHC16B isoform X1 n=3 Tax=X... [more]
A0A6P7I6883.470e-828.79Palmitoyltransferase n=10 Tax=Ovalentaria incertae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 113..226
e-value: 3.0E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR22883:SF371PROTEIN S-ACYLTRANSFERASE 16-RELATEDcoord: 35..257
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 35..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..293
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..190
NoneNo IPR availablePROSITEPS50216DHHCcoord: 116..166
score: 22.478746
NoneNo IPR availableTMHMMTMhelixcoord: 160..182
NoneNo IPR availableTMHMMTMhelixcoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:689980..690861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6858.t1Ggra6858.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 689980..690861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6858.t1 ID=Ggra6858.t1|Name=Ggra6858.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MDGSHALPRALLRLERLLERLNWLLRTAYIALTLSLLLCATLVYARVLLP
LIFRTHSAPVALLHTAASAYLLLSVLLNYALCLLTPPGTPDAPPAHIVPA
PAPKGAAAVIRSQRWRFCGVCERHKPPRAHHCTLCNACFARLCHHCPALG
TCIARDNYPFFFRFVLSAAAGSALASATAAQLYARARRADALFAAAVGGA
ALAIALGSLCAWNAFLLATAQTTVEWLEGVALRRRADAPPAWGRFAGPFH
RGLRRNVDDAFGTVPSRFAPWWLVLVLPLPRLPSAFPPGLDEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC