Ggra6835.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6835.t1
Unique NameGgra6835.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
[Close]
BLAST of Ggra6835.t1 vs. uniprot
Match: A0A2V3IPW1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW1_9FLOR)

HSP 1 Score: 275 bits (704), Expect = 2.200e-88
Identity = 136/219 (62.10%), Postives = 179/219 (81.74%), Query Frame = 0 
Query:   83 SDIKHVEREVSPPLGSRIEVLWRIEYDPDETDNMEVDSGTEGPQTVTRWWGATIQDCLTETVGSRCLQHSGKKVYVLLYDAFQEFGEDTATVAFISHDSLIDLSQLDDVNKGVLEWRMENACSKQAEPSSEDKAQLVSLEQYAAEVSAAVQGAGLSEEADLQILNSLPPHVQAQVASGYRRFADHVKNSLATFMQEKPKDYIVTKADVQKMFASMHPKP 301
            ++ K  E+ + PP+GSRIEVLW+I+Y  D  D MEVD+ TE   TVTRWWGAT+QD L E +GSR    + ++++VLLYDA+QEF EDTATVAFIS D+L+DLSQL+DVNKG L+WR E++  KQ + + ++K+QLVSLE+YAA++SAAVQ AGL+EE DLQIL++LP HVQ++ A+GYRRFAD +KNSL  F+QEKP+DY+VTKADVQK+FAS++  P
Sbjct:  100 TNTKPTEKPIVPPVGSRIEVLWKIDYGADADDKMEVDTATE-ENTVTRWWGATVQDRLKEALGSRRPDQAERQLHVLLYDAYQEFAEDTATVAFISADTLVDLSQLEDVNKGELQWRFEDSAQKQTDSAQDEKSQLVSLEEYAADLSAAVQDAGLTEETDLQILSTLPLHVQSRFATGYRRFADTLKNSLDKFLQEKPEDYVVTKADVQKVFASIYSHP 317
The following BLAST results are available for this feature:
BLAST of Ggra6835.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPW12.200e-8862.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:638433..639341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6835.t1Ggra6835.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 638433..639341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6835.t1 ID=Ggra6835.t1|Name=Ggra6835.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MSSHSASRQPQGVLAEPEKQATGLSCSQPSEAPAQTQKTAPIDESSPGVP
VPTDARVASTGPPSTDDKGVEQGPSCGTSVSPSDIKHVEREVSPPLGSRI
EVLWRIEYDPDETDNMEVDSGTEGPQTVTRWWGATIQDCLTETVGSRCLQ
HSGKKVYVLLYDAFQEFGEDTATVAFISHDSLIDLSQLDDVNKGVLEWRM
ENACSKQAEPSSEDKAQLVSLEQYAAEVSAAVQGAGLSEEADLQILNSLP
PHVQAQVASGYRRFADHVKNSLATFMQEKPKDYIVTKADVQKMFASMHPK
PT*
back to top