Ggra6818.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6818.t1
Unique NameGgra6818.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length529
Homology
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A2V3IPI0 (DEAD-box ATP-dependent RNA helicase 25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPI0_9FLOR)

HSP 1 Score: 500 bits (1287), Expect = 6.500e-170
Identity = 270/530 (50.94%), Postives = 354/530 (66.79%), Query Frame = 0
Query:    6 AFLLNAPFSAPSASPFHSPSRTAPARWTCRRPLHLKRRPKPPAPVSTRPPSELPAEIGDAHITSFISPAPDG-PEARAVRTTLRSRRDVLVIGPGLKGKILTALSGRERAEHALIIVPTRAAALLAAAEAELRGGFKVIVAAGGGFGSWKHAALNANSSKRAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMA---MDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEE--------LDGQSFRTNALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFGEIPKLGKKDVNRVRLWKVHGIQTLQ 523
            AF++  P  + S+SP        PARWTCRRPLH KRRPKPPAP        LP  I  ++    I+PAP+  P+A A+R+ L +RRD LV+GPGL+ K+ TAL+ RERAEHAL++VPTR AAL AA EA LRGGFKVIVA   G+ SWK AA+NANSSKRAVIVV TPRG V  F+ +GHG PWL+KV+F ++VD   ++S GA +    +IKRL  KSRRK +++E RPL+    R A   +D++R  +++VEW    +     M K E+V Q+D S V QKA     +QRLE L  +   V++ S   KMIVFFP ARIIECYA+LCR+RGI ++DIHS+T+ ANRERGLQ  F+S+R VVFASDTLA C  LP +D VVH+ +P+ +  YLRR+ LL +N        SV +L +DE+       +  A +++R+            +D  +    A+DEKARR+AYVS L F+NT+R ++GWSKE+MV+ ANDWA  TFG +P L KKD +RV+LWKV G+Q  Q
Sbjct:    8 AFVVPPPLPS-SSSPXXXXXXXXPARWTCRRPLHRKRRPKPPAPXXXXXLPSLPTAINRSYSAPLIAPAPEKCPQAAALRSALSARRDALVVGPGLRSKVATALAARERAEHALVVVPTRDAALRAAEEAALRGGFKVIVAVSDGYASWKRAAMNANSSKRAVIVVTTPRGAVKHFVNSGHGVPWLRKVRFLLVVDAASLLSIGAANLFGNVIKRLPHKSRRKTVVIEFRPLQQCAPRSAQFILDLLRPNYQLVEWTVPDQLHTHAMNKHELVEQLDLSSVLQKAHTACAKQRLEHLVHLCSDVYRSSQPCKMIVFFPTARIIECYASLCRQRGISIVDIHSNTSVANRERGLQALFDSQRIVVFASDTLALCPTLPHVDTVVHVGLPSHRHNYLRRVALLTKNASESPQSQSVMLLSDDEYAFAVNSHTGLALQLQRQQCPSSHILAHPHIDAHA----AVDEKARRKAYVSWLCFHNTVRNRMGWSKERMVQVANDWALNTFGHVPVLTKKDSSRVKLWKVPGLQVEQ 532          
BLAST of Ggra6818.t1 vs. uniprot
Match: R7QDT4 (Helicase C-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDT4_CHOCR)

HSP 1 Score: 277 bits (709), Expect = 2.270e-81
Identity = 172/447 (38.48%), Postives = 256/447 (57.27%), Query Frame = 0
Query:   77 GPEARAVRTTLRSRRDVLVIGPGLKGKILTALSGRERAEHALIIVPTRAAALLAAAEAELRG-GFKVIVAAGGGFGSWKHAALNANSSKRAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVR--EKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFGEIPKLGKKDVNRVRLWKVHGIQ 520
            G  A  VR  LRSRRD L++GPGL GK+  ALS RE +EHAL++  TR+ A  AAAE  +   G  VI+AAGGG  SW H A+NANS+ ++V+VVATPR +   F  + HG PWL +V+F ++ D  RI+ TG    L+K+ K L     RKN+++  R  +G+ ++M   ++R  EK + +EW   A S VQ + KEE+   V  S  +Q         +   LA   +   ++ G +KMIVFFP AR+ + YA +    G  ++DIH  T  + +   L  F+  +++VVF+SDTLA  T LP ID V+ + +P   +QYLRRI L+  +   G+   S   L EDE     +   D   E+E  +       + +   +  +A+ RAY S L++Y   R++IGW +  +V+ AN WA +T GEIP L KK ++++ L  + G++
Sbjct:  270 GGPAEMVRKALRSRRDTLILGPGLPGKLSAALSARELSEHALVLAATRSEARRAAAEISMDARGSAVILAAGGGGDSWGHPAMNANSALKSVVVVATPRALAADFCNSAHGRPWLGRVRFLVVSDPDRILGTGCEKELRKVFKVLRISDHRKNVVISLRKPEGETEKMVNMVLRGAEKVDTIEWGV-ASSPVQLLQKEELESTVKTSHCKQFCISSNAGGQCASLAAALQVHKEREGKHKMIVFFPTARLAQYYALVFNGSGFDILDIHGRTPPSKKNSFLDTFYGEDKAVVFSSDTLARETLLPPIDTVLQVGLPGSTEQYLRRIALVDNS---GEGHCSKLFLLEDETAEAMRMVGDM-LEVENLEHSATGEWADKVKNVQAEAKIRAYQSWLTYYRISRRRIGWDRLGLVKQANAWALETLGEIPALDKKTIDKLFLRGIEGLR 711          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A6H5L2V2 (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 3.710e-21
Identity = 97/365 (26.58%), Postives = 173/365 (47.40%), Query Frame = 0
Query:  165 RAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKIT-ESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRRA-------YVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFG--EIPKLGKKDVNRVRLWKVHGI 519
            R  IVVATP G +N  + N      +  +   +  +  +++  G    ++ I++ +   SR +  LL S  + GD +++A   ++E++E V+   + +S  Q + ++  V   D              Q++EEL ++  E++     G+K+IVFF  AR+ + YA LC   G  V++IHS  +  +R +  ++F   +  V+F SD  A   + P +  V+ + +P+ K QY+ R+G  A+    GK    V +L + E   ++         ++R D       +  T A++E   + A       Y + L FYN   ++IGWSK  +V  AN W        E+P +  K + ++ L  V GI
Sbjct:  167 RPDIVVATP-GRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPH-SRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQD--------------QQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTAR---AGKAGHGVLLLCDFESMFLSDVRD---LPMQRRDPLPKASVAQITPAVNEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGVPGI 509          
BLAST of Ggra6818.t1 vs. uniprot
Match: D8LUB6 (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 5.820e-21
Identity = 97/365 (26.58%), Postives = 172/365 (47.12%), Query Frame = 0
Query:  165 RAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKIT-ESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRRA-------YVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFG--EIPKLGKKDVNRVRLWKVHGI 519
            R  IVVATP G +N  + N      +  +   +  +  +++  G    ++ I++ +   SR +  LL S  + GD +++A   ++E++E V+   + +S  Q + ++  V   D              Q++EEL ++  E++     G+K+IVFF  AR+ + YA LC   G  V++IHS  +  +R +  ++F   +  V+F SD  A   + P +  V+ + +P+ K QY+ R+G  A+    GK    V +L + E   ++         ++R D       +  T A+ E   + A       Y + L FYN   ++IGWSK  +V  AN W        E+P +  K + ++ L  V GI
Sbjct:  267 RPDIVVATP-GRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPH-SRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQD--------------QQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTAR---AGKAGHGVLLLCDFESMFLSDVRD---LPMQRRDPLPKASVAQITPAVSEAYDKMARLSVVCAYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGVPGI 609          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A7S2X0C3 (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2X0C3_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 7.270e-20
Identity = 96/360 (26.67%), Postives = 163/360 (45.28%), Query Frame = 0
Query:  168 IVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRR------AYVSRLSFYNTLRKKIGWSKEQMVEDANDW-AKQTFGEIPKLGKKDVNRVRLWKVHGIQ 520
            I+VATP G +N   QNG     +++++  +  +  +++  G    + + ++ L    RR++ L  S       +++  D +   H +V+          T+ +EE       + VQQ + V         L K  +    KS  +K+IVFFP AR+++ YA L ++ G  VI++HS  + + R +   +F      V+F SD  A   + P +  VV   MP    QY+ R+G   +  G   +   + +L + E R+      D   E   + + E++   F    L    +        AY + L FYN+  K + WSKE +V +ANDW A     E P L  K V ++ L  V G++
Sbjct:  204 ILVATP-GRLNDLFQNGGLDSMVRQLQVLIFDEADQLLDMGFRPAITEALRYLPAPGRRQSYLF-SATFPNQVEKLTKDALSSNHVVVD----------TVGEEEQTN----THVQQYSLVCEHSAMPAHLWKFLQEAKSKSKDFKVIVFFPTARVVQYYAELFQKLGFPVIEMHSRKSQSVRNKMADIFRNETGRVMFTSDVSARGMDYPGVTMVVQFNMPPDAAQYVHRLGRTGR--GTATEGQGILLLADFE-RSFLNKVRDLPIEPLTK-LSEVEVADFDPTLLGAVRKMNNLTLVMAYQAWLGFYNSNLKLLRWSKEDLVAEANDWFASLGQREPPALLAKTVGKMGLKGVPGLR 543          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A7R9TKM2 (Hypothetical protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TKM2_MICPS)

HSP 1 Score: 103 bits (257), Expect = 1.220e-19
Identity = 112/452 (24.78%), Postives = 204/452 (45.13%), Query Frame = 0
Query:   76 DGPEARAVRTTLRSRRDVLVIGPGLKGKILTALSGRERAEHALIIVPTRAAALLAAAEAELRGGFKVIVAAGGGFGSWK-HAALNANSSKRAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDF-----AFEIEREDIEELDGQSFRTNALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFG--EIPKLGKKDVNRVRLWKVHGI 519
            DG +  A R    S + +  + P ++       + R      L++ PTR  A     EA+    F   V A   FG    ++ L     KR  I+VATP G + Q +++G     L+ V   +L +  R++  G   +++KI++ +      +  L+ S  +  + K++A   +R  H  V+           + +EE  G    + V+Q     P   ++  LA+I +     +  +K++ FF  AR     A L R     +++IHS  + + R +    F  ++R+V+  SD  A   + P +  VV + +P  ++QY+ R+G  A+    GK    + +L   E     K   D       F++  E++ ++   S   +A+ +K + + Y + L ++    KK+GW+ E +V +AND+A +  G  E P + KK V  + L  V G+
Sbjct:   81 DGKDVLA-RAKTGSGKTIGFLLPAIEALARDGGAARRGRPRVLVLSPTRELATQILDEAKALLTFHDGVGAQVVFGGTNFNSDLRNLRDKRCDILVATP-GRLIQHLEDGDRD-LLRDVNVLVLDEADRLLDMGFKPSIEKILRSVPQD---RQSLMFSATVSDEIKKIAAAGLRPGHVYVD----------CVGEEE--GPDTNAQVKQSLAAAPLSHQMPTLAQIIDDHAATTPNHKIMCFFTTARGTGFAAELFRSFRDDIVEIHSKMSQSKRTKATDQFRAAKRAVMMTSDVTARGIDFPDVTLVVQIGIPANREQYIHRLGRTAR---AGKSGEGILMLAPREEFFAKKDVGDLPIVRATFDVSDENVAKI---SRAMDAVSDKTKAQTYAAWLGYHKPFIKKMGWTPETLVREANDYATEVMGCPEPPPMMKKTVGMMGLKGVPGL 508          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A7S3CBF8 (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBF8_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 1.860e-19
Identity = 90/359 (25.07%), Postives = 164/359 (45.68%), Query Frame = 0
Query:  168 IVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFE----IEREDIEELDGQSFRT-NALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDW-AKQTFGEIPKLGKKDVNRVRLWKVHGIQ 520
            ++VATP G +N   QNG     +++++  +  +  +++  G    + + ++ L    +R++ L  S       +++  D + + H +V+          T+ +EE       + V Q + V         L K  +   Q++  +K+IVFFP AR+++ Y+ L ++ G+ VI++HS  +   R R  +VF       +F SD  A   + P +  V+   MP    QY+ R+G   +  G   +   + +L + E RA      D   +    +   ++ + D    R    ++      AY + L FYN+  K + WSKE +V +ANDW A     E P L  K V ++ L  V G++
Sbjct:  181 VLVATP-GRLNDLFQNGGLDSMVRQLRVLIFDEADQLLDMGFRPAITEALRYLPPPGQRQSYLF-SATFPNQVEKLTKDALSKNHVVVD----------TVGEEEQTN----AHVSQHSLVCEHSAMPAHLWKYLQQAKQENKDWKVIVFFPTARVVQYYSELFQKLGLPVIEMHSRKSQGVRNRMAEVFRNETGCCMFTSDVSARGMDYPGVTMVIQFNMPPDAAQYVHRLGRTGR--GTATEGKGILLLADFE-RAFLNKVRDLPIQPLDRLSHVEVADFDESLLRAVKKMNNLTLVMAYQAWLGFYNSNLKLLRWSKEDLVAEANDWFASLGQSEPPALLAKTVGKMGLKGVPGLR 520          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A1Y1I668 (DEAD-box RNA helicase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I668_KLENI)

HSP 1 Score: 102 bits (255), Expect = 2.360e-19
Identity = 95/376 (25.27%), Postives = 168/376 (44.68%), Query Frame = 0
Query:  159 NANSSKR------AVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFE------IEREDIEELDGQSFRTNALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFG--EIPKLGKKDVNRVRLWKVHGIQ 520
            N NS +R      A I++ TP  + +        P  LK +K  +L +   +++ G    ++KI++ L  +   +  LL S  +      ++   ++  H  ++   +         K+       Y+++       P   ++     I     ++   +K++VF   AR  + YA L +  G   ++IHS  + A R R  + F +  R V+F SD  A   + P +  V+ + +P  K QY+ R+G  A+    GK+   + +L   E +   K  +D   E      IE +  +E+     R   L+EK   +AYV+ L FYNT  K +GWSK  +V+ AN +A +  G  E P L ++ V  + L  V G++
Sbjct:  386 NINSDRRRLESQPAEILICTPGRLQDHLDNTPSVPQRLKGLKVLILDEADNLLNMGFRPAIEKILRYLPGQ---RQTLLFSATIPPQVHTVSKLALKPNHAFIDTVGEETEQTNIQVKQ------SYAVI-------PLADQIGATFHILRQHIREERNFKVLVFLTTARATQLYAQLFQGIGFPALEIHSRKSQAARTRTSEEFRKGSRVVLFTSDVSARGVDYPDVSMVLQVGLPTDKAQYIHRLGRTAR---AGKEGEGILMLAPYE-KYFLKQVADLPLEQYGPVPIEADIRQEVQRGMSR---LEEKTLVQAYVAWLGFYNTFCKNLGWSKADLVQQANFYATECLGMSEPPALLRRTVGMMGLKGVPGLR 738          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A5B8MIP2 (DEAD-box ATP-dependent RNA helicase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIP2_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 2.390e-19
Identity = 90/341 (26.39%), Postives = 155/341 (45.45%), Query Frame = 0
Query:  168 IVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRR------AYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFGEIPK 502
            I+VATP G +N   QNG     +++++  +  +  +++  G    + + ++ L    RR++ L  S       +++  D +   H +V+          T+ +EE       + VQQ + V         L K  +    KS  +K+IVFFP AR+++ YA L ++ G  VI++HS  + + R +   +F      V+F SD  A   + P +  VV   MP    QY+ R+G   +  G   +   + +L + E R+      D   E   + + E++   F    L    +        AY + L FYN+  K + WSKE +V +ANDWA +  G + K
Sbjct:  228 ILVATP-GRLNDLFQNGGLDSMVRQLQVLIFDEADQLLDMGFRPAITEALRYLPAPGRRQSYLF-SATFPNQVEKLTKDALSSNHVVVD----------TVGEEEQTN----THVQQYSLVCEHSAMPAHLWKFLQEAKSKSKDFKVIVFFPTARVVQYYAELFQKLGFPVIEMHSRKSQSVRNKMADIFRNETGRVMFTSDVSARGMDYPGVTMVVQFNMPPDAAQYVHRLGRTGR--GTATEGQGILLLADFE-RSFLNKVRDLPIEPLTK-LSEVEVADFDPTLLGAVRKMNNLTLVMAYQAWLGFYNSNLKLLRWSKEDLVAEANDWASR--GSVSK 546          
BLAST of Ggra6818.t1 vs. uniprot
Match: A0A7S0QEX6 (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QEX6_9CRYP)

HSP 1 Score: 100 bits (249), Expect = 1.140e-18
Identity = 99/366 (27.05%), Postives = 167/366 (45.63%), Query Frame = 0
Query:  168 IVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVDLTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVREKHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAKITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANRERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIGLLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSFRTNALDEKARRRA------------YVSRLSFYNTLRKKIGWSKEQMVEDANDW--AKQTFGEIPKLGKKDVNRVRLWKVHGI 519
            I+VATP G +N  ++N      + +++  +L +  +++  G    + ++++ L  K  R+ +L  S  +  D K +A   +R+K +           + T+ KE+   Q     V+Q A V      L EL  +     Q +  YK+IVFF  AR  + YA L    G  V++IHS  +   R +  + F    R V+F SD  A   + P +  V+ + +P+ + QY+ R+G  A+    GKD   V +L E E        S F  +++   ++    Q     A    A  RA            Y + L FYN+  +++GW+K ++V +ANDW  A     E+P L  K V ++ L    G+
Sbjct:  296 ILVATP-GRLNDHLENNGLQRIVTQLRCLILDEADQLLDMGFRPAILQVLRCLPPKETRQTMLF-SATMPQDVKTIASLALRDKKQAF---------IDTVGKEDNTHQH----VEQLAVVCTKEALLPELVMLIRDRMQ-TPDYKVIVFFTTARQTQLYAELFNLMGTPVLEIHSRRSQPQRNKVSEEFRTGARLVMFTSDVSARGMDYPDVTSVIQVGLPSDRAQYIHRLGRTAR---AGKDGAGVLLLCEFE--------SFFLQDVKDLPLQTRPSQPLAALAPVMPAVARALASVSDGSLCTAYQAWLGFYNSSLRRMGWTKAELVAEANDWITAVMNRAEVPPLDPKTVGKMGLKGTPGL 634          
The following BLAST results are available for this feature:
BLAST of Ggra6818.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPI06.500e-17050.94DEAD-box ATP-dependent RNA helicase 25 n=1 Tax=Gra... [more]
R7QDT42.270e-8138.48Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6H5L2V23.710e-2126.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB65.820e-2126.58DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S2X0C37.270e-2026.67Hypothetical protein n=1 Tax=Chloropicon primus Ta... [more]
A0A7R9TKM21.220e-1924.78Hypothetical protein n=2 Tax=Micromonas pusilla Ta... [more]
A0A7S3CBF81.860e-1925.07Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A1Y1I6682.360e-1925.27DEAD-box RNA helicase family protein n=1 Tax=Klebs... [more]
A0A5B8MIP22.390e-1926.39DEAD-box ATP-dependent RNA helicase n=1 Tax=Chloro... [more]
A0A7S0QEX61.140e-1827.05Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 325..400
e-value: 0.0086
score: 23.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 300..400
e-value: 2.0E-11
score: 44.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 294..453
score: 11.843409
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 282..511
e-value: 1.5E-20
score: 75.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 81..256
e-value: 1.8E-8
score: 36.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 116..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..59
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 112..520
NoneNo IPR availablePANTHERPTHR24031:SF384ATP-DEPENDENT RNA HELICASE MSS116, MITOCHONDRIALcoord: 112..520

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:607090..608676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6818.t1Ggra6818.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 607090..608676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6818.t1 ID=Ggra6818.t1|Name=Ggra6818.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=529bp
MSCNPAFLLNAPFSAPSASPFHSPSRTAPARWTCRRPLHLKRRPKPPAPV
STRPPSELPAEIGDAHITSFISPAPDGPEARAVRTTLRSRRDVLVIGPGL
KGKILTALSGRERAEHALIIVPTRAAALLAAAEAELRGGFKVIVAAGGGF
GSWKHAALNANSSKRAVIVVATPRGVVNQFIQNGHGPPWLKKVKFFMLVD
LTRIVSTGALDNLQKIIKRLSDKSRRKNILLESRPLKGDFKRMAMDMVRE
KHEIVEWAQQAKSDVQTMTKEEVVGQVDYSLVQQKARVGPPRQRLEELAK
ITESVFQKSGGYKMIVFFPAARIIECYANLCRERGIKVIDIHSHTTTANR
ERGLQVFFESERSVVFASDTLATCTNLPLIDCVVHMEMPNQKDQYLRRIG
LLAQNMGGGKDRLSVAILGEDEFRAITKPESDFAFEIEREDIEELDGQSF
RTNALDEKARRRAYVSRLSFYNTLRKKIGWSKEQMVEDANDWAKQTFGEI
PKLGKKDVNRVRLWKVHGIQTLQETTSI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase