Ggra6811.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6811.t1
Unique NameGgra6811.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length225
Homology
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A2V3IGG8 (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGG8_9FLOR)

HSP 1 Score: 251 bits (641), Expect = 6.770e-81
Identity = 120/212 (56.60%), Postives = 157/212 (74.06%), Query Frame = 0
Query:    4 KASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKGAGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHPPTLKTDLSTRSYMGRGSGEEFQLEFTDGYVVIQPFEE 215
            +  ++     LFELER KLLRI L  +   +AWIK G ++AR G L  +RQ  REQG  K++KKA +GEGM L+KC+GDG  +CAD+ KLV++V L ++T++LNGNDVLALS SL+YD   MKGA + SG +FN+KVSG+G++AFT  G VV  +A+PE PVYTDP++TVAWTH P+ K  LS +S +GRGSGEE Q EF  G V++QPFEE
Sbjct:   31 RTRIQPSSQSLFELERSKLLRINLKPKKDNYAWIKLGCIIARQGDLNTSRQSMREQGLGKIVKKAVSGEGMNLIKCKGDGIVFCADDDKLVSLVHLHEQTLFLNGNDVLALSPSLSYDFALMKGAHIASGSVFNIKVSGTGIMAFTSRGDVVTLEASPENPVYTDPNSTVAWTHQPSTKMALSMKSIVGRGSGEEVQFEFKGGVVIVQPFEE 242          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A2N0Z3F8 (Uncharacterized protein n=1 Tax=Niallia nealsonii TaxID=115979 RepID=A0A2N0Z3F8_9BACI)

HSP 1 Score: 219 bits (558), Expect = 1.020e-68
Identity = 111/217 (51.15%), Postives = 155/217 (71.43%), Query Frame = 0
Query:    8 KEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHP--PTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESFSAD 220
            K+ G  LFELE  ++L I LN Q     W KAG+MV+  G++KFTR+G  E G   ++KKAFTGEG +L+K EG+GT Y AD GK +T++ L +E+IY+NGND+LA   S+ +D+K MK  AGMMSGGLFN+++SG+G+VA T H   +  + T   PV+TDP+ATVAW+    P   TD+S +++ GRGSGE  Q++F+ DG+VV+QPFEE + A+
Sbjct:   16 KDKGEGLFELETPRMLEINLNKQI----WAKAGSMVSYRGRIKFTREGVLENGLGTLLKKAFTGEGASLMKAEGEGTLYLADQGKKITILHLQNESIYVNGNDLLAFEPSINWDIKLMKKIAGMMSGGLFNIRLSGTGMVAITSHYEPLTLKVTKNNPVFTDPNATVAWSGDLQPDFVTDISLKTFFGRGSGESIQMKFSGDGFVVVQPFEEVYYAE 228          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A2V3J5K9 (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K9_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 4.250e-68
Identity = 107/218 (49.08%), Postives = 149/218 (68.35%), Query Frame = 0
Query:    1 MADKASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKGAGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHPPTLKTDLSTRSYMGRGSGEEFQLEFTDGYVVIQPFEESFS 218
            + +    K  G  +FE+ERD++L+I L      FAWIKAGT++AR G +KFTRQG REQG   ++KKA TGEG+ LV+C+G G  YCAD+ K V+V+ L  +TIY+N  +VLALS+SL Y+ K +  AGM + GL ++K+SG G ++ T     ++  ATP+ P+Y+ PDATVAWTH P+   DLS R   GR +G+E QL+FT G+V+IQP  +  S
Sbjct:   70 LVENTRAKAKGYPVFEVERDRVLQINLGGSHDSFAWIKAGTVIARRGTVKFTRQGFREQGAGLLVKKAVTGEGLKLVQCKGSGIVYCADDAKAVSVIELRKQTIYVNSPNVLALSSSLRYEFKLLSNAGMAASGLLSLKISGLGFLSVTSLKGAIMMTATPDDPLYSKPDATVAWTHHPSFTVDLSPRLLTGRATGQEVQLKFTHGFVIIQPLPKHLS 287          
BLAST of Ggra6811.t1 vs. uniprot
Match: AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D1 (AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D1)

HSP 1 Score: 212 bits (540), Expect = 5.430e-66
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 0
Query:    8 KEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHP--PTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEE 215
            K+ G   FELERD++L + L+ +     W+K G MVA  G +KFTR+G  E G  K++KKA TGEG+TL K EG G  Y AD+GK +++++L +E IY+NGND+LA   S+ +D+K MK  AGMM+GGLFNVK+ G+G++A T H   +  + TP++PV+TDP+ATVAW+    P +KTD+S ++ +GR SGE  Q+ F  DG+VVIQP+EE
Sbjct:   16 KDLGQGKFELERDRMLEVNLDGRI----WMKMGAMVAYLGDVKFTREGVLEHGLGKLVKKAVTGEGVTLTKAEGAGKVYLADSGKKISIINLDNEAIYVNGNDLLAFEESIKWDIKMMKKVAGMMAGGLFNVKLEGTGMIAITTHYDPLTLRVTPDRPVFTDPNATVAWSENLVPDIKTDISLKTLVGRSSGESLQMAFKGDGFVVIQPYEE 223          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A1I4S4H1 (Uncharacterized conserved protein, AIM24 family n=2 Tax=Methanolobus profundi TaxID=487685 RepID=A0A1I4S4H1_9EURY)

HSP 1 Score: 212 bits (540), Expect = 7.680e-66
Identity = 108/212 (50.94%), Postives = 151/212 (71.23%), Query Frame = 0
Query:    8 KEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTH--PPTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEE 215
            K+ G   FELERD++L + LN +     WIK G MVA  G +KFTR+G  E G  K+MKKA TGEG++L K EG+G  Y AD GK ++++ L +E+IY+NGND+LA   S+T+D+K MK  AGMM+GGLFNVK+ G+G++A T H   +    T ++PV+TDP+ATVAW+    P +KTD+S ++++GR SGE  Q+ F  +G+VVIQP+EE
Sbjct:   27 KDLGQGKFELERDRMLEVNLNGRV----WIKRGGMVAYLGDVKFTREGMLEHGIGKLMKKAVTGEGVSLTKAEGNGKVYLADGGKKISILHLNNESIYVNGNDLLAFEESITWDIKMMKKVAGMMAGGLFNVKLEGTGMIAITTHYDPLTLMVTNDRPVFTDPNATVAWSGNLQPDIKTDISLKTFVGRSSGESVQMAFRGEGFVVIQPYEE 234          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A7Y3GKF6 (AIM24 family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3GKF6_9DELT)

HSP 1 Score: 211 bits (536), Expect = 2.060e-65
Identity = 108/222 (48.65%), Postives = 151/222 (68.02%), Query Frame = 0
Query:    4 KASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHP--PTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESFSADG 221
            + S KE G  LFELE D+LL I LN       W K G+MVA TG +KFTR+G  E G AK++KK  +GEG  L K EG G  Y AD+GK +++++L +E+I++NGND+LA    + +D+K MK  AGM++GGLFNVK+ G+G++A T H   +  + +  KPV TDP+ATVAW     P +KTD+S ++ +GRGSGE  Q++F  +G+VV+QPFEE +   G
Sbjct:   12 RTSQKERGQGLFELESDRLLEINLNGMV----WTKTGSMVAHTGGMKFTREGVFEHGLAKLVKKTISGEGAKLTKAEGCGALYLADSGKKISIINLKNESIFVNGNDLLAFEGDIQWDIKIMKKIAGMLAGGLFNVKLEGTGMLAITSHHDPLTLKVSSSKPVITDPNATVAWAGALSPEIKTDVSVKTLLGRGSGESIQMKFQGEGFVVVQPFEEVYFQSG 229          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A7J9TTP3 (AIM24 family protein n=2 Tax=Methanosarcinales TaxID=94695 RepID=A0A7J9TTP3_9EURY)

HSP 1 Score: 210 bits (534), Expect = 4.260e-65
Identity = 108/223 (48.43%), Postives = 152/223 (68.16%), Query Frame = 0
Query:    3 DKASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTH--PPTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESFSADG 221
            D    ++ G   FELERD+LL I L  +     W K G+MVA  G +KFTR+G  E G  K++KKA TGEG+ L K EG G  Y AD+GK ++V++L  ++I++NGND+LA   S+ +D+K +K  AG+M+GGLFNVK+ G+G++A T H   +  + TPE PV+TDP+ATVAW+    P LKTD+S ++++GR SGE  Q+ F  DG+VVIQP+EE +   G
Sbjct:   11 DSTGQRDLGEGTFELERDRLLEINLEGKV----WTKMGSMVAYLGDIKFTREGVMEHGIGKMLKKAVTGEGVRLTKAEGTGKLYLADSGKKISVINLDKQSIFVNGNDLLAFEESIMWDIKMLKKVAGLMAGGLFNVKLEGTGMIAITTHYDPLTLKVTPETPVFTDPNATVAWSGNLQPDLKTDVSLKTFVGRSSGESLQMAFKGDGFVVIQPYEEVYFQAG 229          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A520K0F8 (AIM24 family protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A520K0F8_9EURY)

HSP 1 Score: 210 bits (534), Expect = 4.400e-65
Identity = 105/211 (49.76%), Postives = 152/211 (72.04%), Query Frame = 0
Query:   11 GAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFM-KGAGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTHP--PTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESF 217
            G  +FELERD++L + L+       W K G+M+A TG +KFTR+G  E G  K++KKA TGEG++L K EG G  Y AD GK ++++SL +++IY+NGND+LA   S+ +D+K + K AG+M+GGLFNVK+ G+G++A T H   +  + TPE+PV+TDP+ATVAW+    P +KTD+S ++ +GRGSGE  Q+ F  DG+VVIQP+EE +
Sbjct:   19 GEGVFELERDRMLELNLDGTI----WTKKGSMIAYTGGVKFTREGVLEHGLGKLVKKAVTGEGVSLTKVEGTGKVYLADEGKKISIISLDNQSIYVNGNDLLAFEESIKWDIKILRKIAGIMAGGLFNVKLEGTGMIAITTHYDPLTLKVTPEQPVFTDPNATVAWSGSLSPDIKTDVSLKTLVGRGSGESLQMAFKGDGFVVIQPYEEVY 225          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A523YD08 (AIM24 family protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A523YD08_9DELT)

HSP 1 Score: 209 bits (533), Expect = 5.850e-65
Identity = 109/222 (49.10%), Postives = 148/222 (66.67%), Query Frame = 0
Query:    4 KASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFMKG-AGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAW--THPPTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESFSADG 221
            + S K  G  LFELE   LL I LN       W K G+MVA TG +KFTR+G  E G  K++KKA +GEG  L K EG GT + AD GK ++++ L  E+I++NGNDVL    ++ +D+K MK  AGM++GGLFN+K+ G+G+VA T H   +    +P KPV TDP+ATVAW  T  P +KTD+S ++++GRGSGE  Q++F  DG+VVIQP+EE +   G
Sbjct:   12 RTSKKNRGKDLFELETSHLLDINLNG----IVWTKTGSMVAYTGDIKFTREGVLEHGVGKLLKKAVSGEGARLTKAEGKGTLFLADAGKNISILKLQGESIFVNGNDVLGFEGNIQWDIKIMKKVAGMLAGGLFNIKLEGTGMVAITTHHDPITLTVSPNKPVITDPNATVAWSGTLAPEIKTDISFKTFLGRGSGESIQMKFEGDGFVVIQPYEEVYLQSG 229          
BLAST of Ggra6811.t1 vs. uniprot
Match: A0A7S8CDR8 (AIM24 family protein n=1 Tax=Bacillaceae bacterium R1DC41 TaxID=2593652 RepID=A0A7S8CDR8_9BACI)

HSP 1 Score: 209 bits (531), Expect = 1.290e-64
Identity = 106/222 (47.75%), Postives = 149/222 (67.12%), Query Frame = 0
Query:    3 DKASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLKFTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLTDETIYLNGNDVLALSASLTYDVKFM-KGAGMMSGGLFNVKVSGSGVVAFTCHGSVVVFQATPEKPVYTDPDATVAWTH--PPTLKTDLSTRSYMGRGSGEEFQLEFT-DGYVVIQPFEESFSAD 220
            +K   ++ G   FELE  ++L + LN Q     W KAG+M++ TG +KF R+G  E G  K +KKA TGEG +L+K  G G  Y AD GK +T++ L  E+IY+NGND+LA   SL +D+K M K AGMM+GGLFNV++ G G+VAFT H   +     P KP++TDP+ATVAW+    P   TD+  +++ GRGSGE  Q++F+ +G+VV+QPFEE ++AD
Sbjct:   12 EKTKQQDKGQGFFELETQRMLEVNLNGQV----WAKAGSMISYTGGIKFEREGILEHGLGKFVKKALTGEGSSLMKANGSGKLYLADQGKKITILDLLGESIYINGNDLLAFEPSLEWDIKLMRKIAGMMAGGLFNVRLQGKGMVAFTSHYEPLTLLVEPGKPIFTDPNATVAWSGNLSPEFVTDVQLKTFFGRGSGESVQMKFSGEGFVVVQPFEEVYAAD 229          
The following BLAST results are available for this feature:
BLAST of Ggra6811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGG86.770e-8156.60Altered inheritance of mitochondria protein 24, mi... [more]
A0A2N0Z3F81.020e-6851.15Uncharacterized protein n=1 Tax=Niallia nealsonii ... [more]
A0A2V3J5K94.250e-6849.08Altered inheritance of mitochondria protein 24, mi... [more]
AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D15.430e-6650.47AIM24 family protein n=1 Tax=Methanolobus bombayen... [more]
A0A1I4S4H17.680e-6650.94Uncharacterized conserved protein, AIM24 family n=... [more]
A0A7Y3GKF62.060e-6548.65AIM24 family protein n=1 Tax=Desulfobacterales bac... [more]
A0A7J9TTP34.260e-6548.43AIM24 family protein n=2 Tax=Methanosarcinales Tax... [more]
A0A520K0F84.400e-6549.76AIM24 family protein n=1 Tax=Methanosarcinales arc... [more]
A0A523YD085.850e-6549.10AIM24 family protein n=1 Tax=Desulfobacteraceae ba... [more]
A0A7S8CDR81.290e-6447.75AIM24 family protein n=1 Tax=Bacillaceae bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 21..212
e-value: 2.2E-25
score: 89.6
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 12..219
e-value: 1.2E-35
score: 124.9
NoneNo IPR availablePANTHERPTHR38074FAMILY NOT NAMEDcoord: 9..217
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 20..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:576834..577757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6811.t1Ggra6811.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 576834..577757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6811.t1 ID=Ggra6811.t1|Name=Ggra6811.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bp
MADKASVKEGGAHLFELERDKLLRITLNAQTARFAWIKAGTMVARTGKLK
FTRQGAREQGFAKVMKKAFTGEGMTLVKCEGDGTAYCADNGKLVTVVSLT
DETIYLNGNDVLALSASLTYDVKFMKGAGMMSGGLFNVKVSGSGVVAFTC
HGSVVVFQATPEKPVYTDPDATVAWTHPPTLKTDLSTRSYMGRGSGEEFQ
LEFTDGYVVIQPFEESFSADGGAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom