Ggra6787.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6787.t1
Unique NameGgra6787.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length280
Homology
BLAST of Ggra6787.t1 vs. uniprot
Match: A0A2V3IPQ5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPQ5_9FLOR)

HSP 1 Score: 291 bits (744), Expect = 2.590e-95
Identity = 155/260 (59.62%), Postives = 185/260 (71.15%), Query Frame = 0
Query:   23 ASACERSCRLRFCGGASVAFVGAPGVPATPSVCGPGEGA-VRRVVRRVGYTRLRLKGDRHFQGAHQLGLAPRLFEPVLAPLRFGG-SALTLAPDVDGAQRAKLHGACAVVPVAEWG-DSLQRSARVDCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMSGRLLRDDNRRACGRDSLGGMETVVYEAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGGVVLSDVSGSSSLPLGGVIDGSRSRFNVSV 279
            ++AC RSC LRFCGG S A++GA   PATP+VC        R  +R VG   +RL+G R F  A +LGL P  F+PVLAPLR GG SAL L+P V    R +LHGAC +VPV  W  D     +   CVSFRV V  IRVDLEWDSRDDLDVFVTQPDG+QVFFQ TS  GRLLRDDNRRACGR S GG+ETVVYE  + + GAY+VFAEH+R+CG    T WRLR+AV G ++ D+ G+++LPLGGVI+ SRS FN +V
Sbjct:   24 SNACARSCSLRFCGGPSRAYIGAAHTPATPAVCKSLSFLRYRPTIRGVGPAHIRLRGRRRFVRASKLGLVPIPFKPVLAPLRVGGGSALALSPLVSNVDRQRLHGACVIVPVRSWHYDRSASPSSAPCVSFRVSVTDIRVDLEWDSRDDLDVFVTQPDGRQVFFQPTSTKGRLLRDDNRRACGRRSPGGLETVVYEGALQLTGAYKVFAEHTRNCGKGSTT-WRLRIAVQGRIVHDIGGTTNLPLGGVIEDSRSSFNFTV 282          
BLAST of Ggra6787.t1 vs. uniprot
Match: R7Q9Z3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Z3_CHOCR)

HSP 1 Score: 89.0 bits (219), Expect = 5.700e-17
Identity = 87/283 (30.74%), Postives = 125/283 (44.17%), Query Frame = 0
Query:   24 SACERSCRLRFCGGASVAFVGAPGVPATP-------SVCGPGEGAVRRVVRRVGYTRLRLK-GDRHFQGAHQLGLAPRLFEPVLAPLRFG--------GSALTLAPDVDGAQRAKLHGACAVVPVAEWGDSLQRSARV-----------DCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVF-FQSTSMSGRLLRDDNRRACGRDSLGGMETVVYEA---GVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGGVVLSDVSGSSSLPLGGVIDGSRSRF 275
            +AC   C+ R C    +     P +   P       SVC PG+      V R G   L L+ GD +     +    PR   P      F          SA+T + ++ G Q   L  +C + P+ ++    +R  RV           DCVSFR + A I VDL W+S DD D+ +T+PDG  +  FQ  + +GR+  D N  ACG    G  ET  Y     GV   G Y   A H+ +CG    T+W+L V++ G V+    G S+  LG ++   R R+
Sbjct:   28 NACGAQCQFRLCDPFGLPLRRGPNMLIRPPGRLSYGSVCQPGQQI--GYVLRTGEPLLALENGDMNTISKWR----PRKLSPNFLKNTFRVSKNPQRRSSAITTS-ELQGNQFKFLEDSCIIFPIVKYELLDRRRRRVKRVVKTNGSEGDCVSFRTRTAAILVDLTWNSGDDFDIQITEPDGVTLSRFQPETKTGRINGDANSDACGLIDFG-RETARYLTTTDGVK-NGIYRAEARHNVNCGQG-GTKWKLEVSIDGKVVETKEGFSNGDLGDMVGRIRFRY 300          
BLAST of Ggra6787.t1 vs. uniprot
Match: R7Q9I4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9I4_CHOCR)

HSP 1 Score: 88.6 bits (218), Expect = 6.930e-17
Identity = 85/283 (30.04%), Postives = 123/283 (43.46%), Query Frame = 0
Query:   13 LLVVALSLGGASACERSCRLRFC--------GGASVAFVGAPGVPATPSVCGPGEGAVRRVVRRVGYTRLRLKGDRHFQGAHQLGLA------PRLFEPVLAPLRFGGSALTLAPDVDGAQRAKLHG--------ACAVVPVAEWGD-----SLQR---SARVDCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMS-GRLLRDDNRRACGRDSLGGMETVVY-EAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGGVVLSDVSGSSSLP 263
            L   AL+L  ++ C ++CR RFC        G  +  F+ AP    +  +C PG         R G   +    D +     Q   A      P+ F   L PL+F        P+  G  R +  G         C V+P+  +G+     S+ R     R DCVSFR +   + ++L WDS DD D+ VT+P+G  V   +     G L  D+N  AC      G E V+Y +    + G Y    +H  +CGD   TR+RLRV V G V+   +G S+ P
Sbjct:   10 LFCAALALTASAQCGKTCRFRFCRLSDMSLRGKGARTFLRAPFTSLSGVICLPGSNVTDL---RSGQAMVAQGKDPNMVPISQFSPAGLDTSFPKRFFR-LFPLQF-------VPEEQGMGRLRTRGNQQEFLDDLCVVLPITSYGEFEKDESITRVSGGGRKDCVSFRTRNPMVLIELSWDSADDFDLEVTEPNGTVVSRDAPDAGVGELNNDNNVGACNIMIPAGKEAVLYRQEDELMSGDYTATIKHFNNCGDG-RTRYRLRVIVDGEVVVFRTGLSNAP 280          
BLAST of Ggra6787.t1 vs. uniprot
Match: R7Q2Y4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2Y4_CHOCR)

HSP 1 Score: 78.6 bits (192), Expect = 2.960e-13
Identity = 75/262 (28.63%), Postives = 107/262 (40.84%), Query Frame = 0
Query:   26 CERSCRLRFCG---------GASVAFVGAPGVPATPSVCGPGEGAVRRVVRRVGYTRLRLKGDRHFQGAHQL--------GLAPRLFEPVLAPLRFGG---SAL-TLAPDVDGAQRAKLHGACAVVPVAEWG----------DSLQRSARVDCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMS-GRLLRDDNRRACGRDS--LGGMETVVYEAGVHVQ-GAYEVFAEHSRSCGDDDATRWRLRVAVGGVV 252
            C   C+ R C           AS   +GAP     P +C PG+        +VG   L+    + F     +        GL        + P +      S L  L+  V+  Q + LH  C ++PV  +             L  S R +CV+FR     I V L WDS+DD D+ V +PDG  + F++T    G+L  D+N   C  DS    G E VVY    +++ G Y+V   H   C     T W+L V + G V
Sbjct:   25 CGSFCKFRLCNFDGDRTTLPKASFTILGAPSTAQLPFICRPGQ--------KVGEV-LKTGEAQVFDSGRYVPISEWSPRGLRRNFISTYIRPFKVPALPHSGLGRLSSSVN--QHSFLHDQCMIIPVNRYEIINYATGRPTRILNASGRTECVAFRTTAPTIEVKLTWDSQDDFDLEVEEPDGDVLSFRNTRTEYGKLNGDNNAGRCDSDSDLFFGRENVVYFPNPNIETGRYKVRVIHYNKCSRRP-TNWKLMVVINGAV 274          
BLAST of Ggra6787.t1 vs. uniprot
Match: R7Q9E1 (Gal-2,6-Sulfurylases II n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9E1_CHOCR)

HSP 1 Score: 63.2 bits (152), Expect = 6.390e-8
Identity = 47/156 (30.13%), Postives = 67/156 (42.95%), Query Frame = 0
Query:  116 DGAQRAKLHGACAVVPVAEWG---------DSLQRSARVDCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMSGRLLRDDNRRACGRDSLGGMETVVYEAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGGVVLSDVSGSSSL 262
             G Q   L   C  +P+  +           ++  +   DCVSFR     I V++ WDS DD D+ V  PDG           GRL++D+N   C      G E VV++      G YE+   H  +CG    TR+ +   V GV +    G SS+
Sbjct:  131 SGNQEDFLDDLCVTLPIRRYNIENTDGSVFRTISTNNERDCVSFRTINQAILVEVAWDSADDFDLSVQDPDGG---------GGRLIKDNNIGRCQGGPPQGKEAVVFDTAK--PGTYEITLRHFNNCGG--RTRFTVNAIVNGVRVFQRRGRSSV 273          
BLAST of Ggra6787.t1 vs. uniprot
Match: A0A350XQ56 (FecR domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A350XQ56_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 8.250e-8
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 0
Query:  146 DCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMSGRLLRDDNRRACGRDSLGGMETVVYEAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGG-VVLSDVS 257
            D  +  V +  + V L+W+   D+D++VT P+G+ V + S S SG  L DD+ + C  D+    ET+ +E G    G+Y V  ++   CG   A  + + V V G V+LS  S
Sbjct:  295 DTATLTVGLGDVAVTLDWEGPADIDLWVTDPNGETVRYDSDSSSGGHLDDDSNKDCEADAPPPPETISWEPGTAPLGSYSVTVDYWTECGAG-AVEFTVTVTVNGQVILSTTS 406          
BLAST of Ggra6787.t1 vs. uniprot
Match: A0A7C1Y9G5 (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1Y9G5_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-7
Identity = 42/125 (33.60%), Postives = 66/125 (52.80%), Query Frame = 0
Query:  132 VAEWGDSLQRSARVDCVSFRVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQS-TSMSGRLLRDDNRRACGRDSLGGMETVVYEAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGGVVLSD 255
            +A+ GD+ Q  +             ++V L WDS DDLD++VT P+G+Q++F +  S SG  L  D+R     +++   E V +E G    G Y V  ++  +CGD    R  L+V VGG ++ D
Sbjct:  674 IADLGDAQQLGS-----------GEVQVTLLWDSGDDLDLYVTDPNGEQIYFDAPNSSSGGFLDVDDRGGDCTEAVTRAENVFWETGAP-SGTYTVEVQNFEACGDSAVAR--LQVRVGGELVVD 784          
The following BLAST results are available for this feature:
BLAST of Ggra6787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IPQ52.590e-9559.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9Z35.700e-1730.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9I46.930e-1730.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q2Y42.960e-1328.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9E16.390e-830.13Gal-2,6-Sulfurylases II n=1 Tax=Chondrus crispus T... [more]
A0A350XQ568.250e-833.63FecR domain-containing protein n=1 Tax=Actinomycet... [more]
A0A7C1Y9G51.150e-733.60Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 7.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:517995..518834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6787.t1Ggra6787.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 517995..518834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6787.t1 ID=Ggra6787.t1|Name=Ggra6787.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=280bp
MRRRWAMRRLLLLLVVALSLGGASACERSCRLRFCGGASVAFVGAPGVPA
TPSVCGPGEGAVRRVVRRVGYTRLRLKGDRHFQGAHQLGLAPRLFEPVLA
PLRFGGSALTLAPDVDGAQRAKLHGACAVVPVAEWGDSLQRSARVDCVSF
RVKVAHIRVDLEWDSRDDLDVFVTQPDGKQVFFQSTSMSGRLLRDDNRRA
CGRDSLGGMETVVYEAGVHVQGAYEVFAEHSRSCGDDDATRWRLRVAVGG
VVLSDVSGSSSLPLGGVIDGSRSRFNVSV*
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