Ggra6736.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6736.t1
Unique NameGgra6736.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length229
Homology
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A2V3IGL0 (Putative phycocyanin operon protein Z n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGL0_9FLOR)

HSP 1 Score: 239 bits (610), Expect = 5.250e-76
Identity = 126/216 (58.33%), Postives = 161/216 (74.54%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQL 216
            +FSRL HVN NLRKKAS +L++ AT  +I RL+S L  ++VA+RRAAVQAL+MTG PAL  +L +L +T N TVRASC+K + G+ L+FP+ RQ F   A ++LQ  LQ  DPV+KLAT+GCLAT+GSD K+  +V A G+ +A QIL S C   +D+VVAATA GALAQIAQNG+PE KQ +I H  +L  S  +DD+ GFNYV+EM  SHLEQL
Sbjct:   44 LFSRLSHVNPNLRKKASYQLSERATPQIITRLISELSVEDVAHRRAAVQALSMTGLPALQPVLHQLDTTDNVTVRASCAKVLSGIALYFPDARQTFPQAAFNSLQTALQHGDPVTKLATIGCLATMGSDFKEGGQVTANGNASAVQILFSLCTASSDMVVAATAAGALAQIAQNGTPETKQHVIDHFQSLTASPEADDEPGFNYVREMVSSHLEQL 259          
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A1X6PEY8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEY8_PORUM)

HSP 1 Score: 135 bits (341), Expect = 2.930e-35
Identity = 91/219 (41.55%), Postives = 125/219 (57.08%), Query Frame = 0
Query:    2 FSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTA-DPVSKLATVGCLATLGSDQK---DKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQL 216
            F RL H N+ +RK+AS  +AD  T   I RL++LL   +VA+RRAAVQ+L M G  A+PA+  +L ++ + TVRAS  K +  + L+FP  R  F   A+D ++  L  A DPV+KLATVG L TLGS  K   D  E    G+  A   L+   D   D+ VAA AVGALA I  +G   ++ A++  L AL      D   G  +++EMA +H   L
Sbjct:   70 FVRLGHKNEVMRKRASLAIADNRTPDTIDRLIALLPLDDVAHRRAAVQSLGMIGMDAVPALSHQLATSTDATVRASAVKGLAAVALYFPAERATFPTVAMDTMEAALTGAPDPVTKLATVGALGTLGSPTKGGADDGEAALPGNARAVAFLIRIADETEDLGVAAVAVGALASIGASG---ERDAVLPALQALAEKQGGD---GSEFIREMAGTHASNL 282          
BLAST of Ggra6736.t1 vs. uniprot
Match: HEAT repeat domain-containing protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI000564F82A (HEAT repeat domain-containing protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI000564F82A)

HSP 1 Score: 101 bits (252), Expect = 5.070e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F RL+H N NLRKKA  ELA    +  I RL+S+L E++V YRR AV+ L + G  A+P ++  L ++ N TV++SC+KA+  +    P+L   F  + +  L+  L   +P+  +  V  L  +G+              TAF+IL+ T +T  ++ VA   + AL      GS    +AI       V S+ S D++   Y++E A S L +LE
Sbjct:    6 LFERLKHPNPNLRKKAMRELAAARDENTIPRLMSILSEEDVTYRRTAVKTLGVIGTDAVPFVVKSLLNSDNVTVKSSCAKALAQISAHHPDLP--FPEEGIIGLKQALDDPNPIVNIPAVMALGEIGT--------------TAFEILVETLNTTDNLAVAVAILNAL------GSMGDSRAIE------VLSNLSQDETADTYIRESATSALSRLE 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A0F5YJL9 (Phycocyanin operon protein Z n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YJL9_9CYAN)

HSP 1 Score: 101 bits (251), Expect = 8.000e-23
Identity = 73/216 (33.80%), Postives = 113/216 (52.31%), Query Frame = 0
Query:    2 FSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            F +L+H N +LR++A AE+ +   +  I RL+++LD+++V YRRAAV+ L   G  A+PA++  L  + N TVR S +KA+  + + +P+L   F    L  L+  +  A+PV  +A V  L  +G D              AF+IL+ +  T  +V V    V ALA +   G P  ++ + T  H         DQS   YVQE A S L +L+
Sbjct:    7 FEQLKHPNPHLRERAMAEIFESQDENTIPRLINILDDEDVVYRRAAVKLLGAIGTDAVPALVEALLQSNNVTVRGSAAKALAQVAVNYPDLP--FPEAGLQGLKAAINDANPVVHIAAVMALGEVGPD--------------AFEILVDSLKTTDNVAVQVAIVNALASL---GDPRCQEVLTTFAH---------DQSVDVYVQESANSALSRLD 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: L8LQM5 (Adaptin n=1 Tax=Gloeocapsa sp. PCC 73106 TaxID=102232 RepID=L8LQM5_9CHRO)

HSP 1 Score: 99.8 bits (247), Expect = 2.700e-22
Identity = 73/217 (33.64%), Postives = 113/217 (52.07%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F +L+H N NLR++A   +A+   Q  I RL+S+LDE++V YRRAAV+ L + G+ A+P ++  L  + N TVR S +KA+  + + +PE+  +F    L  L+  L  ++PV  +A V  L  +G                A +ILL +  T  +V V  T V  LA +      E    ++T L        + D+S   YV+EMA S L +LE
Sbjct:    6 LFEQLKHPNPNLRERAMFAIAESYDQDTIVRLMSILDEEDVIYRRAAVKTLGIVGSDAVPHLVEALLGSNNVTVRGSAAKALAQIAVNYPEM--SFPEAGLQGLKAALNDSNPVVYIAAVMALGEIGVP--------------ALEILLESLRTTDNVAVQVTIVNTLASVGDQRCVE----VLTEL--------AQDESVDTYVREMANSSLSRLE 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: HEAT repeat domain-containing protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI000476B64C (HEAT repeat domain-containing protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI000476B64C)

HSP 1 Score: 99.4 bits (246), Expect = 3.530e-22
Identity = 69/217 (31.80%), Postives = 117/217 (53.92%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F +L+H N NLR+KA  ELA+   +  I RL+S+L++++V YRRAAV+AL + GA  +P+++  L ++ N TVR+SC+KA+  + +  PE++     + +  L+  L   +PV  +  V  L  +G                 F +L+ T +T  ++ V    + AL  +   G P   + ++T+L        S+D+S   Y+QE A S L +LE
Sbjct:    6 IFEKLKHPNPNLRRKAMLELAEARDENTIPRLMSILNQEDVTYRRAAVKALGIIGADVVPSVVDSLLNSDNATVRSSCAKALAQVVVNHPEVQM--PEEGIQGLKQALNDPNPVVNIPAVMTLGEIGPP--------------VFDLLVETLNTSENLAVGVAILNALGSM---GDPRGVE-VLTNL--------SNDESADPYIQESATSALSRLE 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A2G4F287 (Phycocyanin operon protein Z n=4 Tax=Microcoleaceae TaxID=1892252 RepID=A0A2G4F287_9CYAN)

HSP 1 Score: 98.6 bits (244), Expect = 7.280e-22
Identity = 69/217 (31.80%), Postives = 118/217 (54.38%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F +L+H N ++R +A  E+AD   +  I+RLV +LD+++V YRRAAV+AL   G  A+P+++  L +++N TVR S +KA+  + + +P+L   F    L  L+  +  A+PV  +A V  L  +GS              +AF+IL+ + +T  +V V    V ALA +      E            V ++ ++D++  +YV+E A S L +L+
Sbjct:    6 LFEQLKHPNPHMRDRAMFEIADSRDENTISRLVDILDDQDVTYRRAAVKALGAIGEDAVPSVVDALLNSENVTVRGSAAKALAQIAINYPDLP--FPEVGLQGLKAAINDANPVVHIAAVMALGQMGS--------------SAFEILVESLNTTDNVAVQVAIVSALASVGDRRCVE------------VLTTFANDEAVDSYVRESATSSLSRLD 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A6B3NG78 (HEAT repeat domain-containing protein n=3 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6B3NG78_9CYAN)

HSP 1 Score: 98.6 bits (244), Expect = 7.990e-22
Identity = 69/217 (31.80%), Postives = 114/217 (52.53%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F +L+H N NLR++A  E+ +   +  I RL+ +L E+ V YRRAAV+AL   G  ++P ++  L ++ N T++ASC+KA+  +    PE+   F  + ++ L+  L   +PV  +A+V  L  +GS                 +IL+   +T  +V +A   V AL  IA N + E    ++T          S+D+S  +YV+E A S L +LE
Sbjct:    6 LFEQLKHPNPNLRERAMLEMVESRDENTIPRLMGILGEENVTYRRAAVKALGFIGTDSVPPLVDLLLNSDNVTIQASCAKALAQVAYNHPEV--TFPSEGIEGLKKALDDPNPVVHIASVMALGEIGSP--------------VLEILIEALNTTDNVALAVAIVNALGSIADNRATE----VLTRF--------SNDESADSYVRESATSALSRLE 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: K9VDQ4 (PBS lyase HEAT domain protein repeat-containing protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9VDQ4_9CYAN)

HSP 1 Score: 98.2 bits (243), Expect = 1.050e-21
Identity = 71/216 (32.87%), Postives = 114/216 (52.78%), Query Frame = 0
Query:    2 FSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            F +L+H N +LR +A  E+AD   +  I+RLV +LDE++V YRRAAV+AL + G  A+P+++  L ++ N TVR S +K +  + + +PEL   F    L  L+  +   +PV  +A+V  L  +GS               AF+IL+ +  T  +V V    V ALA +      E            V ++ ++D+S  +YV+E A S L +L+
Sbjct:    7 FEQLKHPNPHLRDRAMFEIADSRDENTISRLVGILDEEDVTYRRAAVKALGVIGEDAVPSVVDALLNSDNVTVRGSAAKVLAQIAINYPELP--FPEAGLQGLKKAIDDPNPVVNIASVMALGQMGS--------------RAFEILVESLKTTDNVAVQVAIVNALASVGDRRCLE------------VLTTFANDESVDSYVRESATSSLSRLD 194          
BLAST of Ggra6736.t1 vs. uniprot
Match: A0A1Z4RVU3 (HEAT repeat-containing PBS lyase n=1 Tax=Chondrocystis sp. NIES-4102 TaxID=2005460 RepID=A0A1Z4RVU3_9CHRO)

HSP 1 Score: 97.8 bits (242), Expect = 1.370e-21
Identity = 69/217 (31.80%), Postives = 112/217 (51.61%), Query Frame = 0
Query:    1 MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQALAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDALDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLSTCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQSGFNYVQEMARSHLEQLE 217
            +F +L+H N NLR KA  EL +I  +  I RL+S+LD+++V YRRAAV+AL + G   +  ++  L ++ NPTVR+SC+K +  + + +P++       A++ L   L   +PV  +  V  L  +GS                F IL+ T +T  ++ V    + AL  +   G P   + ++T L        S+D S   Y++E A S L +LE
Sbjct:    6 LFEKLKHPNHNLRSKAMHELVEIRDENTIPRLMSVLDQEDVTYRRAAVKALGLIGTDVVTPVVDSLINSDNPTVRSSCAKVLAQIAVNYPDVEM--PQVAIEGLTQALNDPNPVVNIPAVMTLGEIGSP--------------VFNILVETLNTTDNLAVGVAILNALGSM---GDPRGVE-VLTKL--------SNDSSADTYIRESATSALSRLE 194          
The following BLAST results are available for this feature:
BLAST of Ggra6736.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGL05.250e-7658.33Putative phycocyanin operon protein Z n=1 Tax=Grac... [more]
A0A1X6PEY82.930e-3541.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
HEAT repeat domain-containing protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI000564F82A5.070e-2333.64HEAT repeat domain-containing protein n=1 Tax=Myxo... [more]
A0A0F5YJL98.000e-2333.80Phycocyanin operon protein Z n=1 Tax=Limnoraphis r... [more]
L8LQM52.700e-2233.64Adaptin n=1 Tax=Gloeocapsa sp. PCC 73106 TaxID=102... [more]
HEAT repeat domain-containing protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI000476B64C3.530e-2231.80HEAT repeat domain-containing protein n=1 Tax=Pleu... [more]
A0A2G4F2877.280e-2231.80Phycocyanin operon protein Z n=4 Tax=Microcoleacea... [more]
A0A6B3NG787.990e-2231.80HEAT repeat domain-containing protein n=3 Tax=uncl... [more]
K9VDQ41.050e-2132.87PBS lyase HEAT domain protein repeat-containing pr... [more]
A0A1Z4RVU31.370e-2131.80HEAT repeat-containing PBS lyase n=1 Tax=Chondrocy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13646HEAT_2coord: 3..82
e-value: 2.8E-8
score: 34.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..222
e-value: 1.8E-21
score: 78.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:322370..323056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6736.t1Ggra6736.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 322370..323056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6736.t1 ID=Ggra6736.t1|Name=Ggra6736.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=229bp
MFSRLRHVNKNLRKKASAELADIATQPVIARLVSLLDEKEVAYRRAAVQA
LAMTGAPALPAILAELTSTQNPTVRASCSKAIGGLGLFFPELRQNFSPDA
LDALQHILQTADPVSKLATVGCLATLGSDQKDKDEVVARGSQTAFQILLS
TCDTQADVVVAATAVGALAQIAQNGSPEQKQAIITHLHALVHSSNSDDQS
GFNYVQEMARSHLEQLEGNNSSAPSNPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold