Ggra6710.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6710.t1
Unique NameGgra6710.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A2V3IJU5 (Mitochondrial inner membrane protease subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJU5_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 1.760e-122
Identity = 178/220 (80.91%), Postives = 194/220 (88.18%), Query Frame = 0
Query:    1 MVRLLYRLLRAFNFVGSVNENQRRSAMRSSTLLKDLIVADLEKPLSYSLPLTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGDPPFSIPKSHCWVERENKQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVAKHFNAPPPSQPQSGTQ--DKSN 218
            M R LYRLLRAFNFVGS  ++Q R+AMRSS LL+DL+ ADLEKPLSYSLPLTGNAMSP+FN  V DM T  DRLVIRRLSGSTQSFLNRVYVDD VV+ DPND RRKYVR+IAA+EG+HMHS   DPPF IPKSHCWVERENK TDAPDS+SFGPLSLQNV+GRVMYAIRSAT+HGRVKNSPYAMASDSIVLAHEN++KHFN PPPSQ QSG+Q  DK N
Sbjct:    1 MARFLYRLLRAFNFVGSTTDSQMRAAMRSSILLRDLMHADLEKPLSYSLPLTGNAMSPLFNNDVKDMNTVQDRLVIRRLSGSTQSFLNRVYVDDVVVILDPNDERRKYVRRIAALEGSHMHSTQDDPPFRIPKSHCWVERENKDTDAPDSTSFGPLSLQNVIGRVMYAIRSATEHGRVKNSPYAMASDSIVLAHENISKHFN-PPPSQSQSGSQPQDKPN 219          
BLAST of Ggra6710.t1 vs. uniprot
Match: R7QQ86 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ86_CHOCR)

HSP 1 Score: 273 bits (699), Expect = 6.570e-89
Identity = 140/210 (66.67%), Postives = 165/210 (78.57%), Query Frame = 0
Query:    1 MVRLLYRLLRAFNFVGSVNENQRRSAMRSSTL---LKDLIVADLEKPLSYSLPLTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGDPP-FSIPKSHCWVERENKQ-TDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVAKHFNAPP 205
            M RLLYR+LR  NFVGSV E+Q R AMRSS +   L+ +I ADL+KPLSY+LPLTGNAM+P+ NA V DM   +DRL+IRRLSG+TQSFLN VYV+D VV+ DPNDARRKYVR+IA +EGAHM S + D P F +P  HCWV R+N+  T APDS+ FGPLSL  ++GRVMYAIRSATDHGRV NS YAMASDSIVLA E +  H + PP
Sbjct:   76 MARLLYRILRVVNFVGSVEESQLRGAMRSSAVMSRLQSMIAADLDKPLSYALPLTGNAMAPLLNADVPDMNAVADRLIIRRLSGNTQSFLNCVYVNDVVVIRDPNDARRKYVRRIAGLEGAHMASDNDDDPSFRVPPRHCWVARDNQDATAAPDSTLFGPLSLDYIIGRVMYAIRSATDHGRVPNSSYAMASDSIVLAQEPITMHLHPPP 285          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A5J4YI97 (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI97_PORPP)

HSP 1 Score: 136 bits (343), Expect = 1.410e-36
Identity = 74/165 (44.85%), Postives = 103/165 (62.42%), Query Frame = 0
Query:   37 IVADLEKPLSYSLPLTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGD---PPFSIPKSHCWVERENKQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVA 198
            I A+ +KPL Y L +TGN+M+P+ N +  +   A D L IRRL   T+     V+V D VV+ DP+DARRKYVR+I A  G  M S       PPF IP +HCWV+ +N      DS SFG +   +++GR +YA+++AT+H R+KNS  A A D I+L++E  A
Sbjct:   49 ISAEWQKPLLYKLAMTGNSMAPLLNENAREDE-ARDVLFIRRLPRPTEQ---SVFVRDVVVMRDPSDARRKYVRRIVAAAGDEMISDREPEKFPPFFIPDNHCWVQCDNPAAPTRDSRSFGAIRFDHIIGRAIYAVKNATEHYRIKNSDRATAEDDIILSYEKPA 209          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A7S0T6I0 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6I0_9RHOD)

HSP 1 Score: 127 bits (320), Expect = 6.820e-34
Identity = 74/151 (49.01%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   51 LTGNAMSPVFNASVDDMR--TASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGD-PPFSIPKSHCWVERENKQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVA 198
            +TG+AM+P  N   D        ++L IRRL   ++     V+ DD VVV DP D RRKYVR+I AM G  M S   + PPF IP +HCWV  +N     PDS  FGPL+L  ++GRV+YA R+ATDH RV+NS  AMA D  VLA E  A
Sbjct:    3 MTGSAMAPTINGGKDGTGGGDVKEQLWIRRLEHVSEE---SVFNDDVVVVVDPEDDRRKYVRRITAMPGEEMVSKKAEEPPFVIPDNHCWVMCDNLN-GKPDSRWFGPLALDKIIGRVLYAARNATDHARVRNSDAAMAIDDAVLAIEEPA 149          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A6D2III8 (Uncharacterized protein n=3 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2III8_9BRAS)

HSP 1 Score: 104 bits (260), Expect = 2.540e-24
Identity = 63/180 (35.00%), Postives = 99/180 (55.00%), Query Frame = 0
Query:   20 ENQRRSAMRSSTLLKDLIVADLEKPLSYSLPLTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSM-HGDPPFSIPKSHCWVERENKQT---DAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            +N  R  +    L+  ++   +   ++Y     G  M+P        M T  + L++R+L      +   V++ D VV+ DPN+  +  VR++AA+EG+ M S    D PF + K  CWV  ENK+    +A DS +FGP+S+ ++VGR +Y +R+A DHG V NS +AM  DS +LA E
Sbjct:   24 KNHTREKLSERELIGVVLKNLVSGRITYLHSGKGQEMAPT-------MGTNENTLLVRKLPVVDTRY---VFIGDAVVLKDPNETNKYLVRRLAALEGSEMVSSDEKDEPFVLEKDQCWVVAENKEIKSKEAYDSRTFGPVSMADIVGRAIYCLRTAVDHGPVSNSEFAMEEDSPILAVE 193          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A0D3DJ44 (Uncharacterized protein n=9 Tax=Brassica TaxID=3705 RepID=A0A0D3DJ44_BRAOL)

HSP 1 Score: 103 bits (256), Expect = 1.200e-23
Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0
Query:   15 VGSVNENQRRSAMRS--STLLKDLIVADLEKPLSYSLPLTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFL-----NRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSM-HGDPPFSIPKSHCWVERENKQT---DAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            +G  N  Q R   R   S ++K+L+   +    +Y   + G  M+P        M +  + L++R+L       L       V V D VV+ DPN+  +  VR++AA++G+ M S    D PF + K  CWV  ENK+    +A DS SFGP+SL ++VGR +Y +R+A DHG V NS ++M  DS +LA E
Sbjct:   21 LGLKNHTQGRVIDREFISVVMKNLLYGRI----TYLNSVKGEGMAPT-------MGSHDNTLLVRKLPDVDTRCLVFCLSGYVSVGDAVVLKDPNETHKYLVRRLAALQGSEMVSSDEKDKPFVLKKDQCWVVAENKEMKSKEAYDSRSFGPVSLADIVGRAIYCMRTAVDHGPVSNSEFSMQKDSPILAVE 201          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A5A7PQD5 (Peptidase S24/S26A/S26B/S26C family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PQD5_STRAF)

HSP 1 Score: 102 bits (254), Expect = 2.010e-23
Identity = 54/126 (42.86%), Postives = 82/126 (65.08%), Query Frame = 0
Query:   74 LVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSM-HGDPPFSIPKSHCWVEREN---KQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            L++R++S +  +   +VYV D VV+ DP D+ +  VR++AA+EG  M S    D PF + K+HCWV  +N   K  ++ DS +FGP+++  +VGRV+Y +R+A DHG V NS ++   DS VLA E
Sbjct:   71 LLVRKISDADPT---KVYVGDVVVLKDPTDSDKYIVRRLAAIEGYEMVSSDESDEPFILEKNHCWVIADNENLKPKESYDSRTFGPVNMTTIVGRVIYYLRNAVDHGPVNNSDFSAGQDSPVLAME 193          
BLAST of Ggra6710.t1 vs. uniprot
Match: Q84VZ6 (At2g31140 n=13 Tax=Brassicaceae TaxID=3700 RepID=Q84VZ6_ARATH)

HSP 1 Score: 101 bits (252), Expect = 3.870e-23
Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 0
Query:   53 GNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGDP---PFSIPKSHCWVEREN---KQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            G  MSP   A+        + L+IR++  +   F   V++ D VV+ DPND+ +  VR++AA+EG  M S  GD    PF + K+ CWV  EN   K  +A DS +FGP+S  ++VGR +Y +R+A DHG V+NS  AM  DS +LA E
Sbjct:   57 GPEMSPTMTAN-------ENTLLIRKIPIANTRF---VFIGDAVVLKDPNDSDKYLVRRLAAVEGFEMVS--GDEKEEPFVLEKNQCWVTAENQELKAKEAYDSRTFGPVSTADIVGRAIYCLRTAVDHGPVRNSQTAMGQDSPILAVE 193          
BLAST of Ggra6710.t1 vs. uniprot
Match: B7FH08 (Peptidase S24/S26A/S26B/S26C family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FH08_MEDTR)

HSP 1 Score: 101 bits (252), Expect = 3.870e-23
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 0
Query:   53 GNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSM-HGDPPFSIPKSHCWVEREN---KQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            G  M+P  +A           L++RRL    Q    RVYV D VV+ +P       VR++AA EG  M S    D  F + K  CWV  EN   K  +A DS +FGP+ + N+VGRV+Y +R+A DHGRV+NSP++M  DS VL  E
Sbjct:   57 GEEMAPTIDAK-------GATLLVRRLPIPDQK---RVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEKDESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYCLRNAVDHGRVQNSPFSMQKDSPVLEME 193          
BLAST of Ggra6710.t1 vs. uniprot
Match: A0A087GMX0 (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087GMX0_ARAAL)

HSP 1 Score: 100 bits (249), Expect = 1.100e-22
Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 0
Query:   53 GNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTDPNDARRKYVRKIAAMEGAHMHSMHGD---PPFSIPKSHCWVEREN---KQTDAPDSSSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            G  M+P   A         + L+IR++  +   +L   +V D VV+ DPND+ +  VR++AA+EG  M S  GD    PF I K  CWV  EN   K  +A DS +FGP+S  +++GR +Y +R+A DHG V+NS  AM  DS VLA E
Sbjct:   58 GREMAPTMGAH-------ENTLLIRKIPIANTRYL---FVGDAVVLKDPNDSDKYLVRRLAAVEGFEMVS--GDVKEEPFVIEKDQCWVTAENQELKANEAYDSRTFGPVSTADIIGRAIYCLRTAVDHGPVRNSDTAMGQDSPVLAVE 194          
The following BLAST results are available for this feature:
BLAST of Ggra6710.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJU51.760e-12280.91Mitochondrial inner membrane protease subunit 1 n=... [more]
R7QQ866.570e-8966.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YI971.410e-3644.85Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A7S0T6I06.820e-3449.01Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A6D2III82.540e-2435.00Uncharacterized protein n=3 Tax=Coluteocarpeae Tax... [more]
A0A0D3DJ441.200e-2335.94Uncharacterized protein n=9 Tax=Brassica TaxID=370... [more]
A0A5A7PQD52.010e-2342.86Peptidase S24/S26A/S26B/S26C family protein n=1 Ta... [more]
Q84VZ63.870e-2341.61At2g31140 n=13 Tax=Brassicaceae TaxID=3700 RepID=Q... [more]
B7FH083.870e-2342.18Peptidase S24/S26A/S26B/S26C family protein n=1 Ta... [more]
A0A087GMX01.100e-2241.61Uncharacterized protein n=1 Tax=Arabis alpina TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 48..183
e-value: 1.2E-11
score: 46.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..218
NoneNo IPR availablePANTHERPTHR47040OSJNBA0068L06.9 PROTEINcoord: 24..195
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 53..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:261212..261868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6710.t1Ggra6710.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 261212..261868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6710.t1 ID=Ggra6710.t1|Name=Ggra6710.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MVRLLYRLLRAFNFVGSVNENQRRSAMRSSTLLKDLIVADLEKPLSYSLP
LTGNAMSPVFNASVDDMRTASDRLVIRRLSGSTQSFLNRVYVDDFVVVTD
PNDARRKYVRKIAAMEGAHMHSMHGDPPFSIPKSHCWVERENKQTDAPDS
SSFGPLSLQNVVGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVAKH
FNAPPPSQPQSGTQDKSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036286LexA/Signal_pep-like_sf