Ggra6695.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6695.t1
Unique NameGgra6695.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length868
Homology
BLAST of Ggra6695.t1 vs. uniprot
Match: A0A2V3IJN0 (Splicing factor SF3a60-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN0_9FLOR)

HSP 1 Score: 638 bits (1645), Expect = 3.720e-220
Identity = 326/467 (69.81%), Postives = 379/467 (81.16%), Query Frame = 0
Query:    3 TSDLENVRQLHEDIETLKHLAAAALQSRAEPTAPHHRLNGVEPPLRTTRDVEQLVADFTGLASSKAAALREAYRRPFAQAPRDALSSFYAQLRDLRDAHRGRALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAANYPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRLLNAAREAKYGDTAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            +S+LEN+RQ+HED+ETL+HLAAAALQSR EP+ PH RL  +EP L+T RD EQL AD    AS KAA L   Y +   +   DALSSFYAQLRDLRD HR R  +   SRDAALLQA+Y+  +FSGEEC GRYLD+L H+Q +LN++K      QSVEYYQYVRD+++ F SL   VRTS+AYE YL  L  YLKDFARRAHP++ TD H+   H++ARKQI   LS+IAA Y T EQLLE L    LR+RL++ GLKCGGRPQ+RAKRLL AARE KYG  A+LE+ V FALDK+LAPER ATVAN+QKRL LSYAEIEAERRAMEA+ADGVE E+VEQ+E+T+YNPKD+PLGWDGKPIPYWMYKLHGLNHEF+CEICGN TYKGPRAFERHFTD+QHVQGLRRLGIGYSKAYMMIT I+DALKL  RM  ++ Q+QFDED++MEFED  GNVMNRKTY+DLLRQG
Sbjct:    2 SSELENMRQMHEDLETLQHLAAAALQSRVEPSTPHQRLKWIEPALQTARDAEQLAADLCAHASKKAAVLCSQYEQTLPRREDDALSSFYAQLRDLRDLHRSRPALASSSRDAALLQASYKAATFSGEECGGRYLDVLCHYQTYLNVSK------QSVEYYQYVRDNISDFCSLAGGVRTSKAYERYLSELEKYLKDFARRAHPLEGTDEHMQRAHEEARKQIEKMLSEIAATYGTDEQLLEQLGGDALRERLVEVGLKCGGRPQERAKRLLKAAREMKYGRIALLERSVRFALDKVLAPERRATVANIQKRLGLSYAEIEAERRAMEAVADGVE-EEVEQVESTLYNPKDVPLGWDGKPIPYWMYKLHGLNHEFKCEICGNGTYKGPRAFERHFTDSQHVQGLRRLGIGYSKAYMMITGIEDALKLEARMRLTEAQAQFDEDRDMEFEDAAGNVMNRKTYNDLLRQG 461          
BLAST of Ggra6695.t1 vs. uniprot
Match: R7Q5E3 (Matrin-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5E3_CHOCR)

HSP 1 Score: 482 bits (1240), Expect = 5.330e-159
Identity = 253/478 (52.93%), Postives = 326/478 (68.20%), Query Frame = 0
Query:    9 VRQLHEDIETLKHLAAAALQSRAEPTAPHHRLNGVEPPLRTTRDVEQLVADFTGLASSKAAALREAYRR--------PFAQAPRDALSSFYAQLRDLRDAHRG--------RALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQS-VEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAANYPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRLLNAAREAKYGDTAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            +RQ HEDIETLKHLA+ ALQSR      H RL  +  PL T R  EQL      LA+ K  +L   Y          P   AP D LS+FYA+LR +RDAHR         R +  +  RD ALL A++ P  FSGEE +GRYLD + H+ A+LN+   AK+G ++ +EYY+YV   VT F ++PP+VR+S  Y  YL  L AY  DFA+RAHPMD  + H+       RK +   L DI+    + + +L+ L    ++  L+  G KCGGRP+DRA RLL AAR  K+G+  +LE  V FA++++LA E+ ATVANV+K+L+LSYAEIEAER A EA       ++ E+ME+T+YNPKD+PLGWDGKPIPYWMY+LHGLNHEF+CEICGNATYKGPRAFERHFTD+QHVQGL+ LGIGYSKA++MIT+I DA  L+E++ K    + FDED EMEFED+ GN++N+KTY DL++QG
Sbjct:    1 MRQTHEDIETLKHLASCALQSRTSIPISHPRLAPLSHPLPTLRSAEQLTQQLVHLAAEKTLSLSSLYSNDDTLHRVNPDLSAP-DPLSAFYAKLRQVRDAHRSVTFGVTQPRPVPTEGERDLALLHASHHPVVFSGEEGNGRYLDFMRHYTAYLNVMSKAKQGKENQIEYYEYVDKAVTDFDAVPPSVRSSHVYSRYLSDLLAYCVDFAQRAHPMDRVEEHMEVAEANTRKAMEEKLKDISHRMASPQAVLDELGADGVKKELVSLGQKCGGRPEDRAARLLKAARNGKFGERVILEGAVKFAVEEVLAEEKRATVANVRKKLSLSYAEIEAERIADEAAG----ADEDEEMESTLYNPKDVPLGWDGKPIPYWMYRLHGLNHEFKCEICGNATYKGPRAFERHFTDSQHVQGLKCLGIGYSKAFLMITRIQDARMLNEKLTKQSEAAAFDEDAEMEFEDQEGNILNKKTYTDLIKQG 473          
BLAST of Ggra6695.t1 vs. uniprot
Match: A0A2V3IJQ1 (Pheophorbide a oxygenase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJQ1_9FLOR)

HSP 1 Score: 370 bits (949), Expect = 2.760e-115
Identity = 201/435 (46.21%), Postives = 273/435 (62.76%), Query Frame = 0
Query:  473 ENEHDVKTQPFEPSRAAQPANKEQLP---NNRFNWYNQWYPVSLIADLDVRKPNAFHILGTNIVVWSVPQKGQDSWAVFYDRCPHRFAALSEGRIDPTTRSLECGYHGWQFNSKGECTSVPQSEK----PIMACAKALPSISQSGLLFVWMGSSTPPPGSGPAFIDDVRAKYITSAYSRILPLCFTTLFQNVLDPAHRASSSD---TSP------NTETSDG--AGLHRRLLR-RF--------------------LPIASGLVRTFALRGTSRRPFFRVPSWLDHIQRNRLVEGDLELLMTQQREMRKVSRTKDYAGSWGGFYMPTSSDRLIVEMKRWLDENAPTESYDWFTFSDEEHI-GYKPRLASHTKECSSCSKIRKRVALLERIAAILAACAISCGIIMSDELQSVLTSIVGFSGFIFVVSRGLRKRLE 867
            EN  ++++ P    R A+   K+  P   N+ F+W NQWYPV L+ADL   KPNAF IL  +IVVW  P    +SW VF+DRCPHRFAALSEGRIDP +++LECGYHGWQF+ +G CTS+PQ+ K    P+  CAK LP +++  LLFVW+G S PPP S P F++DVRAK+IT        LC T +  + +  AH          +P      ++++S G  A  H   +R R+                    +P++ G VRT A+RG S RP FR+P WLDH++RN+LVEGDL+L+MTQQREM K S+ + YAGSWG FYMPT+SDRLI EMKRWLDEN+P +S  WF F++EE   G   RL SHT+EC++CS++R+ +   E ++ +LA CA +  ++  +    +L +   F   I+V SR +R  LE
Sbjct:   84 ENPSNLRSNP----RQARLKPKQSGPAHNNHMFDWSNQWYPVGLLADLLRSKPNAFKILDIDIVVWQSPST-PNSWTVFHDRCPHRFAALSEGRIDPVSKTLECGYHGWQFDFQGTCTSIPQASKRPSNPV--CAKPLPCVARGPLLFVWLGESQPPPDSSPIFVEDVRAKHITI-------LCCTDIASSKIHFAHHGQIGHRDLAAPIPIRILSSQSSQGFMADYHNGSVRIRYRPPCLIEIVTSRGFSFAYYAVPVSFGFVRTIAIRGASYRPLFRIPRWLDHLKRNQLVEGDLKLMMTQQREMSKSSKGQTYAGSWGEFYMPTTSDRLIAEMKRWLDENSPPDSCSWFAFAEEEQFPGSSSRLTSHTRECTACSRVRQGLIRTELMSKVLAVCAAAATLLFQNA-HPILLATATFFFLIYVFSRRVRNSLE 503          
BLAST of Ggra6695.t1 vs. uniprot
Match: A0A7S2ZB02 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZB02_9RHOD)

HSP 1 Score: 278 bits (710), Expect = 2.700e-80
Identity = 196/518 (37.84%), Postives = 271/518 (52.32%), Query Frame = 0
Query:    1 MSTSDLENVRQLHEDIETLKHLAAAALQS----RAEPTAPHHRLN-GVEPP------------LRTTRDVEQLVADFTGLASSKAAALREAYRR-PFAQA----------PRDALSSFYAQLRDLRDAHRGRALVPDVSRDAALLQAAYRPP---SFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVR--DDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIA--ANYPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRLLNAAREAKYG-----------DTAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQM--ETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERM-NKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            MS+  LE  R  +E++E    L AA L+     R   +A +  LN G +              + T  D EQ+V      A SK   L+  +   P   +          P  ++S FY +L+ ++ AH G      ++      QAA       SFSGEE  G+YLDL E    F+NL     +G    E Y Y+    +   F SLP  VR    Y  Y++ L  YL DFA R  P+   +  ++ V  +A +++  +  D+   + Y + + L +  SP  L+  L + GLK GG P  RA+RL  A +++  G           +T +LE  V +  + +LA    +T  NV+K+LALSY E+E ER A E   +  + E       E T++NPKD+PLGWDGKPIPYW+YKLHGLNHEFRCE+CG+ TY+GPR FERHFT+ +H   L+ LG+ YS+ Y M+T+IDD LKL ++  N S  Q     D E EFED  GNV NRKTY DL RQG
Sbjct:    1 MSSYPLEIRRSQYEEVERALRLIAAGLKEHEKLRNSKSAKNRALNEGADARQGMFVNADGSDIIATADDAEQVVRRLVETAHSKVEQLKGGFEEDPLLTSEVDDVNGKGDPEKSMSLFYERLKAIQSAHTGDHAEEVMTAGQLDRQAAMSVSPEVSFSGEEAHGKYLDLHESHTKFINL-----QGIDP-EVYDYITFLQNFYAFGSLPEDVRRRPDYNDYIRGLLNYLIDFADRVFPLKFVEDKLAGVRKKAEEKMSKASDDLVDVSKYDSPQALEKGESPDALKQALKKMGLKFGGTPAQRAERLFKAHKKSANGTNGIGGVGLRRETELLEAQVKYMTEDILADLLQSTRMNVEKKLALSYEELEQERYAEENPVNPDDDEDGSDSGEEKTIHNPKDVPLGWDGKPIPYWLYKLHGLNHEFRCEVCGDVTYRGPRNFERHFTEARHTHNLKMLGVQYSRYYYMVTQIDDVLKLADKSRNLSASQLNRTADDE-EFEDAEGNVFNRKTYEDLRRQG 511          
BLAST of Ggra6695.t1 vs. uniprot
Match: R7QD05 (Rieske domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD05_CHOCR)

HSP 1 Score: 275 bits (704), Expect = 1.050e-79
Identity = 151/372 (40.59%), Postives = 211/372 (56.72%), Query Frame = 0
Query:  485 PSRAAQPANKEQLPNNRFNWYNQWYPVSLIADLDVRKPNAFHILGTNIVVWSVPQKGQDSWAVFYDRCPHRFAALSEGRIDPTTRSLECGYHGWQFNSKGECTSVPQ--SEKPIMACAKALPSISQSGLLFVWMGSSTPPPGSGPAFID-DVRAKYITSAYSRILPLCFTTLFQNVLDPAH--------------------RASSSDTSPNTETSDGAGLHRRLL------------RRFL----PIASGLVRTFALRGTSRRPFFRVPSWLDHIQRNRLVEGDLELLMTQQREMRKVSRT---KDYAGSWGGFYMPTSSDRLIVEMKRWLDENAPTESYDWFTFSDEEHIGYKPRLASHTKECSSCSKIRK 814
            PS +  P+    L    FNWY+QWYP++ ++DL    P    +L T +VVW    +   +W+VF+DRCPHR AALSEGR+     +LEC YHGW+F+  G C  +PQ    +   ACAKALP + + GLLFVWMG+  P     P  ++ D RA+++ S + R LPLCF+TL QNVLDPAH                    R  SS  +  T   D   +  R L            + FL    P+ +GLVRT A+R ++RR  FR P+W DH++RN L+E DL+L+ TQQ  MR  + +   +DY+ +WG + MP S+DRL+VEM+RWL+ +AP E  +WF F + E      R+  H K C+ C++  K
Sbjct:   76 PSTSPAPSPAAPL----FNWYDQWYPLAPLSDL-CPTPTRIVLLSTPLVVW----RAAAAWSVFHDRCPHRLAALSEGRL-AEDGTLECAYHGWRFSPSGACARIPQLGPVRSPRACAKALPVLERGGLLFVWMGARAPRVDETPHSLEGDARARFVHSCFQRTLPLCFSTLLQNVLDPAHIHFAHHGFLGDRAQAAPIPIRVLSSSAAGFTADYDAGNVRLRFLPPCLVEIVTSTGQSFLYYAVPVRAGLVRTIAIRASARRVLFRAPAWADHMRRNLLLEQDLQLMRTQQEAMRTDAESEGRRDYSRAWGAYQMPASADRLVVEMRRWLENHAP-EGEEWFAFGEGEVEEAGMRMEGHVKTCAVCARALK 436          
BLAST of Ggra6695.t1 vs. uniprot
Match: M2Y7A7 (Splicing factor 3A subunit 3 isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7A7_GALSU)

HSP 1 Score: 274 bits (701), Expect = 4.750e-79
Identity = 190/525 (36.19%), Postives = 273/525 (52.00%), Query Frame = 0
Query:    1 MSTSDLENVRQLHEDIETLKHLAAAALQSRAEPTAPHHRLNGVEPPLRTTRDVEQLVADFTGLASSKAAALRE------AYRRPFAQAPRDALSSFYAQLRDLRDAHR---GRALVPDVS-------RDAALLQAAYRPPSFSGEE-----CDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAANYPTYEQLLE---HLSPPNLRDRLLQFGLKCGGRPQDRAKRLLNA-----------------AREAKYGD------------TAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQM---ETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            M++S LE  R  HED+E    LA   L+ + +   P          L T + V  LV +F      K   L E      A    + + P + LS FY +LR++++++R   GR    + S       ++  LL        FSGEE       GRYLDL   ++AF+N+     +GA  V+Y  Y+     KF     +++  +AY+ YL +L +YL+DF R+  P+    A   ++  Q  +Q    +S+   N   +    E   ++SP  ++  LL  GLKCGG P +RAKRL                    +R +  GD             A +E ++ +  +++LA E A T   V+K+L+ SY EIEAER + E      E E        E  +YNPK++PLGWDGKPIPYW+YKL+GLN E+ CEICGN  Y+GPRAFERHFT+ +H+QGLR LGI YS+ + M+T I+DAL+L  ++       +F  ++E EFED  GNV NR+TY DL RQG
Sbjct:    1 MASSVLELTRTYHEDVERAVKLATKLLKEKPKSYLPK---------LETEQRVRNLV-EFIQDRYQKLLRLYEDEDGTRAAEIEYLEQP-ERLSLFYERLREIKESYRKSGGRGNELESSSTLTAKKQEEELLALTEPKLVFSGEENYGYFAFGRYLDLSSLYEAFVNI-----KGAPEVDYIDYL-STFYKFEFFSKSLKNKKAYQTYLSSLLSYLEDFGRKLRPLRDERAERDSLEVQFEQQWKPEVSEPTINLDKFNSASELEANMSPEEMKQILLSMGLKCGGTPSERAKRLFETKNKELSSLPASMFSRKYSRNSGNGDQKTTSESANRKEVAKMEMLIQYLCEEILADEVANTKTYVEKKLSQSYTEIEAERISEEQALQNPEEESXXXXXXXEKPIYNPKNIPLGWDGKPIPYWLYKLYGLNLEYSCEICGNENYRGPRAFERHFTEAKHIQGLRFLGIQYSRHFYMVTGIEDALRLDAKLKNQMELERFRPEEE-EFEDAQGNVFNRRTYEDLRRQG 507          
BLAST of Ggra6695.t1 vs. uniprot
Match: splicing factor 3A subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8004 (splicing factor 3A subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8004)

HSP 1 Score: 261 bits (667), Expect = 2.250e-76
Identity = 135/300 (45.00%), Postives = 189/300 (63.00%), Query Frame = 0
Query:  146 LNLNKSAKRGA---QSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAANYPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRLLNAAREAK------------------YGDTAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEV-------EQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYM 417
            L L++++  GA   Q ++Y  YV+ ++T F+S+PP++R S  Y  YL  L  YL+ FA RAHP+      IS      +  +   L+ +   + + E+ L+ +   ++R+ LL  GLKCGG P DRA+RL +A++                      G+  VLE ++   ++K+LA ER ATV N++K+ +LS+ E+EAER A EA+A+   +       E+ E++E  VYNPKD+PLGWDGKPIPYW+YKLHGLNHEF+CEICG ATYKGPRAFERHFTD QHV GLR LG+ Y KA +
Sbjct:   28 LALDEASSIGAMDKQKLDYLAYVKTEMTDFTSVPPSIRNSPGYRHYLSDLLTYLESFADRAHPLSGVREDISHSETSLKSDLYARLAKLRDRFKSPEEALQGMGANDIREELLMLGLKCGGSPLDRARRLFDASQSVLPTADDSISRPENPIGNQVLGERVVLEGLIGHIMEKVLAEERRATVLNIEKKQSLSWIELEAERVAEEAVAERGALLAKDRRQEEDEEVEQPVYNPKDVPLGWDGKPIPYWLYKLHGLNHEFKCEICGEATYKGPRAFERHFTDAQHVNGLRCLGVNYFKALL 327          
BLAST of Ggra6695.t1 vs. uniprot
Match: A0A2P6SBN6 (Putative transcription factor C2H2 family n=3 Tax=Rosoideae TaxID=171638 RepID=A0A2P6SBN6_ROSCH)

HSP 1 Score: 238 bits (608), Expect = 7.770e-66
Identity = 178/523 (34.03%), Postives = 255/523 (48.76%), Query Frame = 0
Query:    1 MSTSDLENVRQLHEDIETLKHLAAAALQ----SRAEPTAPHHRLN-GVEPPLRTTRDVEQLVADFTGLASSKAAALREAYRRPFAQAPRDALSSFYAQLRDLRDAHRGR--ALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAAN-------------------YPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRLL-----------------NAAREAKYGDTAVLEQVVAFA-----------LDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            MS++ LE  R  HE++E L+ L    LQ    S  E  A  HR+   ++    TT  + ++  D       + AAL             +  S+FY +L+++R+ HR    ALV D + +   L        FSGEE  GRYLDL E +  ++N      +  + +EY  Y+ D  ++   +P  ++++R Y  YL+ L  YL  F  R  P+   D   + V  +  +Q      +   N                   + T E+L+E L P  L++ L   GLK GG  Q RA+RLL                  +   A+ G     +QVV              L  LL+     T  N+ K+ AL+Y EI AER   E  AD     + +  E  +YNP  LP+GWDGKPIPYW+YKLHGL  EF+CEICGN +Y G RAFERHF + +H  G+R LGI  +K +  IT I++A +L +R+   Q  +++  D E E+EDR GN+ N+KTY DL RQG
Sbjct:    1 MSSTLLEVTRGAHEEVERLERLIVKDLQNEPASGKERLAQSHRVRLMIDTVTSTTERLIEIYEDNDNARKDEIAALGGQ-----TATGTNVFSAFYDRLKEIREYHRRHPAALVVDANEEHEALLKEEPQVEFSGEEAYGRYLDLHELYNQYIN-----SKFGEPIEYSAYL-DVFSQPHKIPRKLKSTRQYREYLENLVQYLVYFFHRTEPLQDLDRIFTKVETEFEEQWADGKVEEWENAIQDGEQVQDQQTVIDLDYFSTVEELVE-LGPEKLKEALASLGLKIGGTVQQRAERLLLTKDTPLEKLDKKHFAKGSHGSAQNGAAVAPQQVVMLKEIALLEAKLKKLSDLLSEAIERTKDNIVKKQALTYEEIAAEREDEETQADT----ESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNQSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAQELWKRIQARQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQG 507          
BLAST of Ggra6695.t1 vs. uniprot
Match: A0A7N2MGG0 (Matrin-type domain-containing protein n=2 Tax=Quercus TaxID=3511 RepID=A0A7N2MGG0_QUELO)

HSP 1 Score: 236 bits (602), Expect = 5.540e-65
Identity = 183/525 (34.86%), Postives = 261/525 (49.71%), Query Frame = 0
Query:    1 MSTSDLENVRQLHEDIETLKHLAAAALQSRAEPTAPHHRL-------NGVEPPLRTTRDVEQLVADFTGLASSKAAALREAYRRPFAQAPRDALSSFYAQLRDLRDAHRGR--ALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVHDQARKQIVTSLSDIAAN-------------------YPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRL----------LNAAREAK-------YGDTAVLEQ--------VVAFALDKL---LAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            MS++ LE  R  HE++E L+ L    LQ+  EPT+   RL       N ++  + TT  + ++  D       + AAL          A  +  S+FY +L+++R+ HR    A V D + +   L        FSGEE  GRYLDL E F  F+N    +K G  S EY  Y+ D  ++   +P  ++ +R Y+ Y++ L  YL  F +R  P+   D   S V  +   Q   +  +   N                   Y T E+L+E + P  L++ L   GLK GG  Q RA+RL          L+    AK        G  A L+Q        ++   + KL   L    A T  N+ K+ AL+Y EIEAER            E  +Q    +YNP  LP+GWDGKPIPYW+YKLHGL  EF+CEICGN +Y G RAFERHF + +H  G+R LGI  +K +  IT I++A  L +++ + Q  +++  D E E+ED+ GN+ N+KTY DL RQG
Sbjct:    1 MSSTLLEVTRSAHEEVERLERLIVKDLQN--EPTSNKDRLFQSHRVRNMIDNIISTTDKLVEIYEDKDNARKDEIAALGGQ-----TAAGTNVFSAFYDRLKEIREYHRRHPAARVVDANEEFEGLLKEEPQIEFSGEEAMGRYLDLHELFNQFIN----SKFGDPSTEYSTYL-DVFSQPHKIPHKLKLTRQYKEYMENLLEYLIYFFQRTEPLQDLDRIFSKVETEFEDQWANNAIEGWENMGQENGYVPAQHTVIDLDYYSTVEELVE-VGPEKLKEALAALGLKTGGTVQQRAERLFLTKNTPLEKLDKKHFAKGSRVFQQNGTAAALQQDENSKEIALMEAKMQKLCDLLDETIARTRDNIVKKQALTYEEIEAEREXXXXXXXXXXXEDDQQ----IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQERQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQG 508          
BLAST of Ggra6695.t1 vs. uniprot
Match: splicing factor SF3a60 homolog n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEEB92 (splicing factor SF3a60 homolog n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEEB92)

HSP 1 Score: 236 bits (601), Expect = 7.480e-65
Identity = 178/527 (33.78%), Postives = 255/527 (48.39%), Query Frame = 0
Query:    1 MSTSDLENVRQLHEDIETLKHLAAAALQSRAEPTAPHHRL-------NGVEPPLRTTRDVEQLVADFTGLASSKAAALREAYRRPFAQAPRDALSSFYAQLRDLRDAHRGR--ALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNKSAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFARRAHPMDATDAHISAVH--------------------DQARKQIVTSLSDIAANYPTYEQLLEHLSPPNLRDRLLQFGLKCGGRPQDRAKRL-----------------------------LNAAREAKYGDTAVLEQVVAFALDKLLAPERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNPKDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQHVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFEDRHGNVMNRKTYHDLLRQG 469
            MS++ LE  R  HED+E L+ L    LQ   EPT    RL       N ++  + TT  + ++  D       + A L             +  S FY +L+++R+ HR    A V D + +   L        FSGEE  GRYLD+ E F  ++N      +  + +EY  Y+ D  +    +P  ++ +R Y  YL+ +  YL  F  R  P+       S V                     +  +   + S+ D+   Y T E+L+E L P  L++ L   GLK GG  Q RA+RL                             LN+ +     D A++E  +   L ++L      T  NV+K+ AL+Y E+EAER   E  AD     + +  E  +YNP  LP+GWDGKPIPYW+YKLHGL  EF+CEICGN +Y G RAFERHF + +H  G+R L I  +K +  IT I++A KL ER+ + Q  +++  D E E+EDR GN+ N+KTY DL RQG
Sbjct:    1 MSSTLLEVTRSAHEDVERLERLVVRELQR--EPTNNRERLFQNHRVRNMIDSIINTTHKLIEIYEDKDNARRDEIAVLGGQTATGI-----NLFSVFYDRLKEIREYHRRHPAARVVDATEEFEELLKEEPYVEFSGEEAFGRYLDMHELFNEYIN-----SKFGEPIEYSAYL-DTFSHTHKIPLNLKLTRQYRDYLEHILEYLTSFFERREPLQDLGRLFSKVEADFEELWADSKIVGWEKKELENGQISFLESVVDLDY-YSTVEELIE-LGPEKLKEALAARGLKTGGTIQQRAERLFLTKHTPLELLDKKHFAKGSRGSEKNGVNLNSQQIDSNKDIALMEAKMQ-RLCEILQETMQQTKENVEKKQALTYEEMEAEREEEELPADT----ESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLNIPNTKNFNEITSIEEAKKLWERIQERQGLNKWRPDLEEEYEDREGNIYNKKTYTDLQRQG 507          
The following BLAST results are available for this feature:
BLAST of Ggra6695.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJN03.720e-22069.81Splicing factor SF3a60-like n=1 Tax=Gracilariopsis... [more]
R7Q5E35.330e-15952.93Matrin-type domain-containing protein n=1 Tax=Chon... [more]
A0A2V3IJQ12.760e-11546.21Pheophorbide a oxygenase, chloroplastic n=1 Tax=Gr... [more]
A0A7S2ZB022.700e-8037.84Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
R7QD051.050e-7940.59Rieske domain-containing protein n=1 Tax=Chondrus ... [more]
M2Y7A74.750e-7936.19Splicing factor 3A subunit 3 isoform 2 n=2 Tax=Gal... [more]
splicing factor 3A subunit 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D80042.250e-7645.00splicing factor 3A subunit 3-like n=1 Tax=Mercenar... [more]
A0A2P6SBN67.770e-6634.03Putative transcription factor C2H2 family n=3 Tax=... [more]
A0A7N2MGG05.540e-6534.86Matrin-type domain-containing protein n=2 Tax=Quer... [more]
splicing factor SF3a60 homolog n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AEEB927.480e-6533.78splicing factor SF3a60 homolog n=1 Tax=Dioscorea c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 318..338
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 1..470
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 818..837
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..817
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 843..862
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 863..867
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 838..842
IPR024598Splicing factor SF3a60 /Prp9 subunit, C-terminalPFAMPF11931SF3a60_Prp9_Ccoord: 352..470
e-value: 2.3E-48
score: 163.7
IPR031774SF3A3 domainPFAMPF16837SF3A3coord: 126..177
e-value: 3.9E-10
score: 39.7
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 507..594
e-value: 2.2E-15
score: 56.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 508..614
score: 24.946609
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 503..635
e-value: 7.0E-34
score: 118.3
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 501..622
IPR013626Pheophorbide a oxygenasePFAMPF08417PaOcoord: 688..744
e-value: 1.4E-5
score: 25.2
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 1..470
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 376..407
score: 8.850671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:218657..222583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6695.t1Ggra6695.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 218657..222583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6695.t1 ID=Ggra6695.t1|Name=Ggra6695.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=868bp
MSTSDLENVRQLHEDIETLKHLAAAALQSRAEPTAPHHRLNGVEPPLRTT
RDVEQLVADFTGLASSKAAALREAYRRPFAQAPRDALSSFYAQLRDLRDA
HRGRALVPDVSRDAALLQAAYRPPSFSGEECDGRYLDLLEHFQAFLNLNK
SAKRGAQSVEYYQYVRDDVTKFSSLPPAVRTSRAYEAYLQALYAYLKDFA
RRAHPMDATDAHISAVHDQARKQIVTSLSDIAANYPTYEQLLEHLSPPNL
RDRLLQFGLKCGGRPQDRAKRLLNAAREAKYGDTAVLEQVVAFALDKLLA
PERAATVANVQKRLALSYAEIEAERRAMEALADGVEVEQVEQMETTVYNP
KDLPLGWDGKPIPYWMYKLHGLNHEFRCEICGNATYKGPRAFERHFTDTQ
HVQGLRRLGIGYSKAYMMITKIDDALKLHERMNKSQRQSQFDEDKEMEFE
DRHGNVMNRKTYHDLLRQGFHIENEHDVKTQPFEPSRAAQPANKEQLPNN
RFNWYNQWYPVSLIADLDVRKPNAFHILGTNIVVWSVPQKGQDSWAVFYD
RCPHRFAALSEGRIDPTTRSLECGYHGWQFNSKGECTSVPQSEKPIMACA
KALPSISQSGLLFVWMGSSTPPPGSGPAFIDDVRAKYITSAYSRILPLCF
TTLFQNVLDPAHRASSSDTSPNTETSDGAGLHRRLLRRFLPIASGLVRTF
ALRGTSRRPFFRVPSWLDHIQRNRLVEGDLELLMTQQREMRKVSRTKDYA
GSWGGFYMPTSSDRLIVEMKRWLDENAPTESYDWFTFSDEEHIGYKPRLA
SHTKECSSCSKIRKRVALLERIAAILAACAISCGIIMSDELQSVLTSIVG
FSGFIFVVSRGLRKRLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024598SF3a60/Prp9_C
IPR031774SF3A3_dom
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf
IPR013626PaO
IPR031776SF3A3
IPR000690Matrin/U1-C_Znf_C2H2