Ggra6677.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6677.t1 vs. uniprot
Match: A0A2V3IYE9 (Regulator of nonsense transcripts UPF3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYE9_9FLOR) HSP 1 Score: 415 bits (1066), Expect = 7.790e-140 Identity = 242/407 (59.46%), Postives = 291/407 (71.50%), Query Frame = 0
Query: 1 MDRAPARRGRAAGDRSGASRPPPNGARPRRXXXXXXXXXQPASRSRARPKNRARKRAPAPTIAVKLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARRRERDERKKAKATVRGGRSKPRGN-APQPAPTPPANKCNEHAEPTKAGARRKXXXXGDNANSAKREEAVQDSKSSKSPAAERRNGQLRAVENSA--STCSNSANSPP---FVNSAASINGAQGGKGASSRGGPSGRSRYARGQKGRGRFGQNGNGTV 401
MDRA ARRGRA G RPRR Q + RS R KN P++A+K++VRRLPPTLTAE+F +HA P GADKALW AYYPGK+EAVGAVKRSAQVVRHSVAYLAFEKL+DA+HFF +FD FKF KT+DSSLQSGTDY+ARVERAM+Q+TP L RRR P +EGTIESDPDYLNFLA++KGDAEREQ+ELAA + S++V R + E ++ K V+TPL+EDVRARR+ERDERKKAK+TVRG R K RG+ AP PA K E E K GA+RK GDN N++KR++AVQ+ K SKS A ERRNGQ+R +A ST +N+ +PP F N+ A++NG G KG S+R GRSRY+RGQKGRGR+ QNGNGT+
Sbjct: 1 MDRASARRGRAPG------------GRPRRRPPRPSHPQQASPRSHPRSKNXXXXXXXXPSVAIKIVVRRLPPTLTAEQFRTHANPKGADKALWNAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDATHFFNEFDGFKFVDPGKTIDSSLQSGTDYFARVERAMFQTTPLLTRRRAPPAIEGTIESDPDYLNFLAEMKGDAEREQSELAANQTAGSSVVSRHTTTEKEDRASKGLVLTPLIEDVRARRKERDERKKAKSTVRGSRGKGRGSTAPPPAAISAVPKVVESVENVKLGAKRKKRRAGDNKNASKRDDAVQERKGSKSGANERRNGQIRQTGPNAGNSTSANANKAPPSSPFANNNAAMNGGSGSKGGSTRXXXXGRSRYSRGQKGRGRYAQNGNGTI 395
BLAST of Ggra6677.t1 vs. uniprot
Match: R7QSJ8 (Smg4_UPF3 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ8_CHOCR) HSP 1 Score: 168 bits (425), Expect = 1.390e-43 Identity = 124/303 (40.92%), Postives = 166/303 (54.79%), Query Frame = 0
Query: 59 APTIAVKLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAV-GAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTEL-AATLVSASTIVGRA-SANESDN------------NNGK--------KQVITPLMEDVRARRRERDERKKA-KATVRGGRSKPRGNAPQPAPTPPANKCNEHAEPTKAGARRKXXXXG---DNANSAKREEAVQDSKSSKSPAAERRNG 334
APT+AVKL+VRRLPPTLTA++F+ A P GA +A+W ++ PG A G VKR V RH+ AYLAF +DDA F Q F+ KF S D+ ARVERA +Q PPL + P PL GTIE DPDY+ F+A L+ + ++E + A T+ S I R +N SD + GK ++ TPLMEDVRARR+ERD RKK K T R R K R P P+ +P + + T + ++K + AN+AKR+E +Q +K SPA + + G
Sbjct: 93 APTVAVKLVVRRLPPTLTADKFAEIADPAGASRAVWRSFAPGSASAASGPVKRLRLVTRHATAYLAFVNMDDAVAFTQTFNGIKFQDPNAPPSSQ---NHDFIARVERAPWQPVPPLTKITKPLPLHGTIERDPDYMAFVARLEDETKKELSGANALTVAQTSAIFSRGPGSNPSDTQKRDNTSASVSTSTGKAGALAVNGSELSTPLMEDVRARRKERDNRKKTTKVTPRAARGKARH--PHPSDSPHKQQTESPGKVTSSMRKKKQRERARASEIANAAKRQEDMQSAKRIGSPAIDSKRG 390
BLAST of Ggra6677.t1 vs. uniprot
Match: regulator of nonsense transcripts UPF3 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C37A9 (regulator of nonsense transcripts UPF3 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C37A9) HSP 1 Score: 76.3 bits (186), Expect = 2.280e-11 Identity = 66/208 (31.73%), Postives = 91/208 (43.75%), Query Frame = 0
Query: 60 PTIAVKLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARRRERDERKKAKATVRGG 267
P K++VRRLPPTL+ + S A LW + PGK + HS AY+ FE+ +D F + F F + G+ Y A VE A YQ P L ++ EG+I DPDYL F+ L AE L SA + R ++ ++TPLME VR +R + ++ AKA R G
Sbjct: 43 PLSRTKVVVRRLPPTLSEDALVSRIQTRFARPYLWMLFRPGKSTHRNQI--------HSRAYIEFERPEDVLAFHEDFHGHVFVN---------EKGSQYKAMVEYAPYQRVPDLRVKK--DGREGSILRDPDYLEFVDTLGKAAE--------LLPSADVQLERPGSSREG------VIVTPLMEYVRQKRAAKSAQRAAKAGFRSG 217
BLAST of Ggra6677.t1 vs. uniprot
Match: L7M147 (Putative regulator of nonsense transcripts 3a n=6 Tax=Rhipicephalinae TaxID=426437 RepID=L7M147_RHIPC) HSP 1 Score: 73.6 bits (179), Expect = 1.860e-10 Identity = 64/194 (32.99%), Postives = 92/194 (47.42%), Query Frame = 0
Query: 65 KLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRH--SVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESD--NNNGKKQVITPLMEDVRARRRER 254
K++VRRLPPT+T ++F P ++ VK + H S AY+ F D+ F ++FD + F VD + G +Y A VE A +Q P R R P GTIE DP+Y+NFL L+ E TL S T + A E + NNG +V+TPL+E ++ R+ E+
Sbjct: 34 KVVVRRLPPTMTEDQFLEQISPVPESDYMYF------------VKGDLSLGPHAFSRAYINFVNQDEIFIFKEKFDDYIF------VD---EKGNEYPALVEYAPFQKIP-KRRNRKKDPKCGTIEQDPEYINFLESLEQPEE-------VTLPSIDTYIEEIEAREKEIKANNGCLKVVTPLIEYLQQRKLEK 198
BLAST of Ggra6677.t1 vs. uniprot
Match: regulator of nonsense transcripts 3A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF4ED (regulator of nonsense transcripts 3A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF4ED) HSP 1 Score: 73.6 bits (179), Expect = 2.180e-10 Identity = 62/190 (32.63%), Postives = 87/190 (45.79%), Query Frame = 0
Query: 65 KLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARRRER 254
K++VRRLPP+LT E F P + +Y K + S S AY+ F+ +D ++F +FD + F VD+ G +Y A VE A +Q P R+P S +GTIE DPDY+ FL L E L L A E+ G +V TPL+E ++ RR E+
Sbjct: 24 KVVVRRLPPSLTGETFLEQVSP----LPNYDFFYFMKADL------SLGASAFSRAYINFQNYEDIANFRDKFDGYIF------VDAK---GNEYPAIVEFATFQKVPKKKMRKPDSK-KGTIEQDPDYVKFLDSLTNPETEEVVSLDTYLEQL-----EAKEREAKATKGGPKVTTPLIEFIKKRREEK 188
BLAST of Ggra6677.t1 vs. uniprot
Match: regulator of nonsense transcripts 3B isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED887A9 (regulator of nonsense transcripts 3B isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED887A9) HSP 1 Score: 72.8 bits (177), Expect = 4.570e-10 Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 0
Query: 48 RPKNRARKRAPAPTIAVKLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHS--VAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAE-------REQTELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARRRERDERKKAK 261
+PK + +K AP K+++RRLPPT+T E+F P + L+ A K A + +HS AY+ F + D F ++FD + F +D+ G ++ A VE A +Q P + R P GTI+SDPDYL+F+A +K E + ++ L+S ++ A E D K TPL+E ++ R+ ER K K
Sbjct: 30 KPKEKDKKYRSAPP--TKVVIRRLPPTMTLEKFIDQVSPLPENDYLYFA------------KADASLGQHSFCTAYVNFVQPKDVFIFKEKFDDYIF------IDNK---GNEFPAVVEFAPFQKIP-RKKSRQRDPKCGTIDSDPDYLSFVAQVKQTVEEAPDAGIKSTCGKSSPLLSVQDVLEEIEAKERDRKCRK--ATTPLIEYIKQRKMERQRMKDEK 226
BLAST of Ggra6677.t1 vs. uniprot
Match: A0A7S0ZAI8 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAI8_9RHOD) HSP 1 Score: 68.9 bits (167), Expect = 1.060e-9 Identity = 69/224 (30.80%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 64 VKLIVRRLPPTLTAEEFSSHAGPNGAD------KALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTP-PLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESDNNNGKKQVI----------TPLMEDVRARRRERDERKKAKATVRGGRSK 270
VKL+VRRLP LT ++F + G D +W+ + V +S + R+SV YLA+ +D A F A T+ + G + ARVERA Y P ++ + L GTIE DPDY FL K + +T + + L+ + +V A +++ KK+ + TPLM ++R +RRER+ K+ AT RSK
Sbjct: 1 VKLVVRRLPAGLTFDQFCEVSNNAGFDLNAPENTPIWSRF----------VYKSKKT-RYSVCYLAWSSMDRAFRFSD-------ALNGHTITDP-KHGQSFVARVERAPYTKIPNDKATKQSVAALAGTIEEDPDYKEFLK--KYNESLNETTIHSMLLPQAALVSDVGAMSINDSFSKKKSVPLDVNGSPKVTPLMLELREKRRERES--KSGATAEDKRSK 201
BLAST of Ggra6677.t1 vs. uniprot
Match: A0A1Y2BFG8 (Nonsense-mediated decay UPF3 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BFG8_9FUNG) HSP 1 Score: 66.2 bits (160), Expect = 6.490e-9 Identity = 48/140 (34.29%), Postives = 71/140 (50.71%), Query Frame = 0
Query: 65 KLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLE-GTIESDPDYLNFLADLKGD 203
K++VRRLPP L ++ F A W+ Y+ GK+ + +A+ S AYL+F LD + F Q ++ + F +SGT+Y A VE A +Q P RR+P T+E+DP+YL F+ LK D
Sbjct: 39 KVVVRRLPPNLPSDVFDQTVA-QWAHLVTWSKYFAGKI----SKNTTAKPHTLSRAYLSFTSLDHLAEFAQAYNGWLFKEE--------KSGTEYRASVEMAPFQKVP---RRKPRVDYRVNTLETDPEYLEFIESLKQD 162
BLAST of Ggra6677.t1 vs. uniprot
Match: A0A367JB06 (Smg4_UPF3 domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367JB06_RHIST) HSP 1 Score: 67.4 bits (163), Expect = 7.710e-9 Identity = 67/211 (31.75%), Postives = 96/211 (45.50%), Query Frame = 0
Query: 54 RKRAPAPTIAVKLIVRRLPPTLTAEEFSSHAGP-NGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKG----DAEREQT--------ELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARR 251
R+R P P K++VRRLPP L +EF P + +++Y GK+ K + S AY + ++ F + FD F DS G D A VE A YQ TP ++ +GTI+ DPDYLNFL L+ DAE ++ E ++ +T +A ANE N K TPL+E +RA++
Sbjct: 1 RQRKPVPK--TKVVVRRLPPQLAKDEFMEAVKPWINEETTDYSSYISGKI-----AKSKGKENVFSRAYFHLKTMEAVIAFHRGFDGHTFT------DSR---GNDSRAVVEFAPYQKTP--REQKTADARQGTIDEDPDYLNFLKFLEAENNKDAETQEDANNGLNPIEKLENRIAMNTDTAKALANEQAN----KPKTTPLLEHLRAQK 189
BLAST of Ggra6677.t1 vs. uniprot
Match: regulator of nonsense transcripts 3B-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C711DE8 (regulator of nonsense transcripts 3B-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C711DE8) HSP 1 Score: 67.8 bits (164), Expect = 1.520e-8 Identity = 60/200 (30.00%), Postives = 87/200 (43.50%), Query Frame = 0
Query: 55 KRAPAPTIAVKLIVRRLPPTLTAEEFSSHAGPNGADKALWTAYYPGKLEAVGAVKRSAQVVRHSVAYLAFEKLDDASHFFQQFDAFKFAATAKTVDSSLQSGTDYYARVERAMYQSTPPLNRRRPPSPLEGTIESDPDYLNFLADLKGDAEREQTELAATLVSASTIVGRASANESDNNNGKKQVITPLMEDVRARRRER 254
KR T K++VRRLPP +T EEF P ++ L A ++ AY+ F+ +DD F +FD + F VD Q G +Y A VE A +Q P + + GTI+ DPD+L F+ L L A L +A E +NNG +V TPL+E + ++ E+
Sbjct: 35 KREKTTTPLTKVVVRRLPPAMTEEEFLEVVAPLPDHDYFNFSFTDSSLGAHA----------YNRAYINFKNVDDVYTFRDRFDGYVF------VD---QKGDEYPAMVEFAPFQKIPKRSSGKKKDARCGTIDEDPDFLAFMESLTNPTPVTLPNLEAVLEEI-----QAYDRELKSNNGVMKVKTPLLEFIEQKKAEK 210 The following BLAST results are available for this feature:
BLAST of Ggra6677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6677.t1 ID=Ggra6677.t1|Name=Ggra6677.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=419bpback to top |