Ggra6670.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6670.t1
Unique NameGgra6670.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length434
Homology
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BLAST of Ggra6670.t1 vs. uniprot
Match: R7QTM8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTM8_CHOCR)

HSP 1 Score: 194 bits (494), Expect = 4.080e-54
Identity = 143/397 (36.02%), Postives = 208/397 (52.39%), Query Frame = 0 
Query:    1 MCILCCSHKQLELPHAPRCDPRH-LYHVAHFAIAA-GTLFPGERSSIDVYAANSLRLMAEIRTTGLRALFHHEPQWPAATLL--SRVMAVSAEPNSPYGAIVAF---CKQGPSMTGFDNFFRFRVVVVGRYKLARPSKIHCSYPCVLVSLICEE--PSIRLPCPDRSFPFLSPSPL--RRSARSRIITRSTAA---ALRSAPRLRSSTEMGGLRYAHWRSVQPEVLVARACAAAA-EHVDKFRPLVKDDVPNEPCPSWWSFWLCQCLSLCTPQQFLYQLHSETSVVRRLQHFIDFVREGEENKSVADRVRAVQVSKTPALRKTISKKRNKHTSASTTLRKAVKN-KNKRIKPSSRLDEILGTGSDPWPSSPAKGFQNVNLNLPCTGRFRPIPPECSE 381
            MC  CC+H  + L   P   P   LYH+  F +   G LFPGER+++D++ A++LRL++ ++TTGL  L    P W  A  +  +   A+ ++P +P GAI  F      G S T +  F R R+ + GR+  A P   H  +PC  V LIC+   PS+R+P  +  FP+L+P+P   +R+A   I TR+ AA   A+R   R R+S  MGGL YA WR+  P+VL  RA   A    +D    L++    +E CP  WSFWLC  L   T ++ L++L   + +V RL+  I+  +     +S A          + + ++T    R           KA+ N K K+   +S LD   G  + PWPSSPAKGFQ V+L+ P  GRFR   P  S+
Sbjct:    1 MCGTCCTHANV-LKEFPCTHPSSKLYHIGVFTLYPDGVLFPGERATLDIFLASALRLISALQTTGL-PLHPTPPSWLQAPTIPITDAFAIVSDPIAPVGAIAVFDPDLTTGSSTTHYPTFTRVRIRIAGRFSRAAPIHHHAPFPCAQVRLICDSHLPSLRVPLSE-DFPYLNPAPAARKRAASRPIKTRAAAAGLAAVRYVHRRRTSAFMGGLDYAQWRACTPQVLAHRARTLAMYSRLDIDGSLIEWRPCHEACPGVWSFWLCAALPADTVERVLHELLGTSCLVTRLRWLIELFKSRPRKRSRAQLEEDKPYQPSSSRKRTRKSVRQALGEEQLLQVKALTNAKGKKAAMASLLD---GLRARPWPSSPAKGFQRVDLSSPVKGRFRITLPSMSD 391
The following BLAST results are available for this feature:
BLAST of Ggra6670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QTM84.080e-5436.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:152906..154207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6670.t1Ggra6670.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 152906..154207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6670.t1 ID=Ggra6670.t1|Name=Ggra6670.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=434bp
MCILCCSHKQLELPHAPRCDPRHLYHVAHFAIAAGTLFPGERSSIDVYAA
NSLRLMAEIRTTGLRALFHHEPQWPAATLLSRVMAVSAEPNSPYGAIVAF
CKQGPSMTGFDNFFRFRVVVVGRYKLARPSKIHCSYPCVLVSLICEEPSI
RLPCPDRSFPFLSPSPLRRSARSRIITRSTAAALRSAPRLRSSTEMGGLR
YAHWRSVQPEVLVARACAAAAEHVDKFRPLVKDDVPNEPCPSWWSFWLCQ
CLSLCTPQQFLYQLHSETSVVRRLQHFIDFVREGEENKSVADRVRAVQVS
KTPALRKTISKKRNKHTSASTTLRKAVKNKNKRIKPSSRLDEILGTGSDP
WPSSPAKGFQNVNLNLPCTGRFRPIPPECSELRTDKPVSDNDARSKKCTI
RLQTKPTNCVVTNVKHSKSSTTEKNNCSHTTTR*
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