Ggra6669.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6669.t1
Unique NameGgra6669.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1479
Homology
BLAST of Ggra6669.t1 vs. uniprot
Match: A0A2V3J017 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J017_9FLOR)

HSP 1 Score: 764 bits (1974), Expect = 4.900e-248
Identity = 668/1452 (46.01%), Postives = 830/1452 (57.16%), Query Frame = 0
Query:   33 IGDVSPHPQLYFFKWMRAGKAAKLTAAKSLDTAGSFGEQMALYARVRAAARSISSDDPAEPLDTALVLLTPPRDPNDPPAIVSEVPFDMAYYILKVAASANKSITTTIHMPASIALTLTIAVKEIGDKFLHLFADMVPQSPKALQSPPTTNTS--SSSTDMDEADAALALERLRQDVRDKQRRLDNLEQSADSLHQSLHAADSLSADVSALQQRVRTLEEQYVQCEGEKLQAERRVAAHVAHAAKIRTTYNQLAEWYNSLRQEHAELQTKFANSQSQSESTATEDXXTLSARSTDDANATLLQQERDQLKDSLQREREEKDQINSRNSQLLESKARTLAELREQWDAAKNDYEKTRQRSAENAKALSDLQHSIDXXXXXXXXXXXXXXXXXXXXSRAEALIQEKEAEHQAALISARSEASTAEKTSLEAQLQDLKRLHAQQLETAIAEKQQAYDATLSEQLSKKDSEQKEXXXAERAKLGEELENKRKXEIDXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVSNGGREHSEERAVTLESELRVLREEHEALKVSSESYATESKEMHKKELEDVILEKEKLSHEIENLRQESSXXXXXXXXXANVSAQRTTEIATECERLRRELDVLQTQNEEMRKSPREVKSEHAVSDTEQMAANLNIQIAELEKMLRTETEKRNEVTNLLSNADREHDELREMVKRLRHERDVAVADLKGAKEAVPTTEVRNPVIQRSLSRGSQEQEHNIVEERDAAIRELFRVRKGLNKEIRKMKKEKEELVQKLENGPSEEASAALQSQLSASXXXXXXXXXXXXXXXXXXXXXXKLLHAEREAAAVEIDKLNALRETLKSREEELAVLTSKTEGLEASLSTNEERSRMKVQQLESEKEEFQKQLQAARXXXXXXXXXLRSKQEACSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSSTSSTESLLREAQKELAEHKAESNLLQCEVDDLKKAADVKSSAHQAELEALRKELADAETRISDRDEQLNELTRQVKAQLAALESEKVGRESETSAKKKVEEMVEVLTRENGSLTEKVSVESGARISAEKRVSEVESEIRGLRQKVSELESVEKAHSSEGRQMSDEKRALQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAQLIGESKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTEANKSWMVRQLSQERDELEDEKRSLQSELEGISGEVTHLKKLNSRLLSTEDAAELMGSRDRAVSECASLTRANDALQHSLSKAREQSEAVXXXXXXXXXXXXXXXXXLERVKAQLQAADEQRDEALHEARRAAADSAXXXXXXXXXXXXXXXXADKLRA------DNARLGAEARANGGRDXXXXXXXXXXXXXXXDAVLHELINTRVQLAYAQEEAVRLRNKLTKMSAASRSFE 1476
            +GDVSP P+LYFF+W+RAGK AK+TAAKSLD +G+FG++MALYAR+R     I+S DPAEPLDT +VLLTP   P+ PP +VSE+ FDMA YILK+A SA KSI TT++MP SIAL LT++VKEIGDKFLHL+A+++P  P   QSPP  +++  ++S+DMDEA AALALER+RQ VRDKQ+RLD+LE+SADSLHQSL  AD+LSADVSALQQRVRTLEEQY QCE +KL AERRVAAHV HAAKI+ TYNQLA+WYN+LRQEH ELQ+K   S SQ+ STA  +    S  S+ D +   L++E DQLK SLQ ER+EKDQINSRNSQLLESKAR LA+LR+QWDAAKNDYE+TR+RS ENA                               S+AE L++EKE +H+AALI+AR+EAS +EK+SL+AQ+++LK+LHA Q+ +AI +K+Q +D  L E+          XXX                E+D                           L+ S      SE+R                         +   KE H+++LED++LEK++LS +IE LRQ S+   XXXXXX          +                       SPREV + H  +DTEQ+AANLN QI ELE MLRTET+KRNEV+ LL NADREHDELREMV RLR ERD A+++LK  K+AVP  EVRNPVIQRSLSRGS +++ N +EERD A RELFRVRKG+NK+IR++K+EK EL+Q+L++GPSE+ S AL++QL+                         LL AEREAAA+EI K                                                          XXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXX                    XXXXXXX             +AQKE+AE KAESNLLQ E++DLKKAA  +   HQ+EL ++++E       + +RD+QL++L RQ+  QLA LE+EK  RESET AK  +E +V+ L   N SLTE ++                                                     XXXXXXXXXXXXXX                      R +L  E                                     S EA ++ + R+LS   D+L++E  SLQ++L+    EV+HL+K+NS LLS  DAAELM SRD A++EC +LTRA +ALQHSL +A+E+SE  XXXXXXXXXXXXXXXXX                              XXXXXXXXXXXXXXXX            +NA+L  EA  + G D               + VL +LINTR++LAYAQEEAVRLRNKLTKMS  SRSFE
Sbjct:    1 MGDVSPPPRLYFFRWLRAGKPAKVTAAKSLDASGNFGDRMALYARIRPVDGVITSSDPAEPLDTKIVLLTPADTPSAPPIVVSELAFDMAAYILKIALSATKSINTTVNMPTSIALALTVSVKEIGDKFLHLYANLLPNLP---QSPPQLSSAGNTASSDMDEAAAALALERIRQQVRDKQQRLDSLEKSADSLHQSLREADNLSADVSALQQRVRTLEEQYAQCERDKLDAERRVAAHVTHAAKIKNTYNQLAQWYNTLRQEHVELQSKLNKSASQTNSTAVTEES--SVASSQDTDMVYLKKEHDQLKQSLQNERDEKDQINSRNSQLLESKARALADLRDQWDAAKNDYEQTRKRSQENAXXXXXXXXXXXTLSEQLKVKETQLQEKLAALSQAETLLREKETQHEAALIAARNEASESEKSSLDAQIENLKKLHAMQIASAIKQKEQTFDQVLEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELDSLVKEYEQKQESERTALSERIRELEETLETSKAATSISEQRXXXXXXXXXXXXXXXXXXXXXXXXRSAGDKETHQRQLEDLVLEKQRLSQQIEELRQASALEVXXXXXXXXXXXXXXXTMEAXXXXXXXXXXXXXXXXXXXXGSPREVYT-HPANDTEQIAANLNNQIGELEGMLRTETQKRNEVSRLLENADREHDELREMVTRLRKERDEALSELKRTKDAVPNPEVRNPVIQRSLSRGSNDEQKNAIEERDMAFRELFRVRKGMNKQIRQLKQEKLELIQRLKSGPSEDESTALKAQLAEIESQQRKYVEELQASKAEVVEARNLLSAEREAAALEITKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKERDSARHRSSALETELDSXXXXXXXXXXXXXXXXXXXXDAQKEVAERKAESNLLQAEMEDLKKAASEQDLKHQSELASVQQEXXXXXXLLVERDKQLHDLQRQIGEQLAHLETEKSSRESETKAKTALEGLVQRLKSRNASLTENLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLTEKRKELESTNCKLQESEGIREKLSQEVAESRAKAEAFESNMDAAQIALHDAKAKLSEAEEARHSIEAREASVARELSDLADDLKNENASLQAKLDAAEREVSHLEKMNSSLLSPNDAAELMASRDHAIAECHALTRAKEALQHSLHEAQEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENAKLTREA--SNGAD---------------EEVLTDLINTRLELAYAQEEAVRLRNKLTKMSPGSRSFE 1429          
BLAST of Ggra6669.t1 vs. uniprot
Match: R7QT88 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT88_CHOCR)

HSP 1 Score: 293 bits (751), Expect = 2.020e-77
Identity = 262/839 (31.23%), Postives = 409/839 (48.75%), Query Frame = 0
Query:    2 AAVVPSRARTHAR-------------PPPDSTHVLRMTLTLQRIIGDVSPHPQLYFFKWMRAGKAAKLTAAKSLDTAGSFGEQMALYARVRAAARSISSDDPAEPLDTALVLLTPPRDPNDPPAIVSEVPFDMAYYILKVAASANKSITTTIHMPASIALTLTIAVKEIGDKFLHLFADMVPQSPKALQSPPTTNTSSSSTDMDEADAALALERLRQDVRDKQRRLDNLEQSADSLHQSLHAADSLS------ADVSALQQRVRTLEEQYVQCEGEKLQAERRVAAHVAHAAKIRTTYNQLAEWYNSLRQEHAELQTKFANSQSQSESTATEDXXTLSARSTDDANATLLQQERDQLKDSLQREREEKDQINSRNSQLLESKARTLAELREQWDAAKNDYEKTRQRSAENAKALSDLQHSIDXXXXXXXXXXXXXXXXXXXXSRAEALIQEKEAEHQAALISARSEASTAEKTSLEAQLQDLKRLHAQQLETAIAEKQQAYDATLSEQLSKKDSEQ-------KEXXXAERAKLGEELENKRKXEIDXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVSNGGREHSEERAVTLESELRVLREEHEALKVSSESYATESKEMHKKELEDVILEKEKLSHEI----ENLRQESSXXXXXXXXXANVSAQRTTEIATECERLRRELDVLQTQNEEMRKSPREVKSEHAVSDTEQMAANLNIQIAELEKMLRTETEKRNEVTNLLSNADREHDELREMVKRLRHERDVAVADLKGAKEAVPTTEVRNPVIQRSLSRGSQEQEH-NIVEERDAAIRELFRVRKGLNKEIRKMKKEKEELVQKLEN 809
            A+VVPSRAR   R              P    + +R+ L    + G      + Y  +W R  +  K +   S+   G++  +++LY  VR A  +  +D+PA+PLD+ + LL   + P+  P  ++E   D+  ++  +  +  KS+  ++ +  ++ L  T+    IG   L  + +    +P     PP  +++ + +D  EA AA  LERLR DVR+K+ R+D L  S D L +++     L+       DV+AL  R++ LEE+    E EK + E++VAAHVAHA KIR TYNQLA WYN+LR+EH ELQ K  +     + T T+        +T +A    L++ER++L+D L RER EK +I+SRNS+LLESKARTL ELREQWD  +N    T++   E  + L  L+ S+                     + A A  +   ++H+  +  A   A    K   E +L +  + H + +E    +   A D    +Q S+            K+    E+A++  E  +    E D                            ++       +E+  + LE ++R L +   AL+       T  +E H+ E+ ++   KE +  E+    E L+ E           + V A     +  E  + + E++ LQ +N +M+ SPR+V+     S   + AA L  +I+EL  +L+ E++K++E T LL NAD EHDELR MV RLR ERD A    K  K  V   EV  P   RS S      +  N +EERD A+RE+FRVRK + KEI ++KKE +EL +++EN
Sbjct:    3 ASVVPSRARAGGRLPEPXXXXXXXXSSPTQEPYHVRLILQTDSLRGPALSSSETYVIRWQRGTRQVKTSRPASISATGNYTAKLSLYVTVRRAGPAFIADNPADPLDSTIQLL---QSPDVAP--IAETRIDIPGFLQALVQAGRKSLPLSLALAPAVDLGATLTFNTIGGSSLTPYTEPGRPAPMLAGMPP--HSALALSDPGEAAAAAELERLRADVREKEGRIDKLADSTDKLDRAVQEQARLANGAVPAGDVAALHVRIKYLEEEKASVEREKEEVEKKVAAHVAHAQKIRNTYNQLAGWYNNLRKEHVELQAKHPSPIG--DQTTTDRELPQDVPTTHEAEMRSLERERNELQDLLDRERSEKKEIHSRNSELLESKARTLVELREQWDVTQNTLSTTQRSKEEQMEKLHVLEQSVTELQAQLEIKEAEVSQRSRELADATAATEMAMSQHEHHIQQAVKAAVDEAKAEAERELDEQIKRHKEAVEQLRIDADSARDTIREKQRSEXXXXXXXXXXXIKKNVQDEQAEMYAEKLSLLHSERDAIVEEKEENVKKALAEAKESSAATAEARQMWEEKLTRNEKERLALEEKVRDLMQSSAALEEEKSRSLTTMEEAHRSEVTELQSAKEHVEAELSRAQEALKDEKKVTPNHGDNESVVVA-----VQEELRQAKAEVEALQKENAQMQSSPRDVQV--TGSGNHENAAELEREISELRVLLKRESDKKSEATRLLQNADAEHDELRAMVTRLRSERDEAQQGAKLTKNDVSNPEV-GPTASRSASNIENHLDSCNFLEERDKALREVFRVRKLMKKEISRLKKENDELSRQVEN 824          
The following BLAST results are available for this feature:
BLAST of Ggra6669.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0174.900e-24846.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QT882.020e-7731.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 779..810
NoneNo IPR availableCOILSCoilCoilcoord: 1255..1282
NoneNo IPR availableCOILSCoilCoilcoord: 287..307
NoneNo IPR availableCOILSCoilCoilcoord: 995..1079
NoneNo IPR availableCOILSCoilCoilcoord: 1313..1414
NoneNo IPR availableCOILSCoilCoilcoord: 557..584
NoneNo IPR availableCOILSCoilCoilcoord: 593..627
NoneNo IPR availableCOILSCoilCoilcoord: 396..437
NoneNo IPR availableCOILSCoilCoilcoord: 676..738
NoneNo IPR availableCOILSCoilCoilcoord: 492..519
NoneNo IPR availableCOILSCoilCoilcoord: 639..666
NoneNo IPR availableCOILSCoilCoilcoord: 447..489
NoneNo IPR availableCOILSCoilCoilcoord: 816..885
NoneNo IPR availableCOILSCoilCoilcoord: 1118..1145
NoneNo IPR availableCOILSCoilCoilcoord: 1181..1250
NoneNo IPR availableCOILSCoilCoilcoord: 231..265
NoneNo IPR availableCOILSCoilCoilcoord: 200..227
NoneNo IPR availableCOILSCoilCoilcoord: 897..987
NoneNo IPR availableCOILSCoilCoilcoord: 529..549
NoneNo IPR availableCOILSCoilCoilcoord: 1090..1110
NoneNo IPR availableCOILSCoilCoilcoord: 329..388
NoneNo IPR availableGENE3D1.10.287.1490coord: 1166..1301
e-value: 1.7E-6
score: 29.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1401..1441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1142..1165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 887..934
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1401..1431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 814..828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 980..1003
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..979
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1142..1206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 892..917
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1166..1182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1183..1197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 804..837
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..1015
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..192
NoneNo IPR availablePANTHERPTHR34491:SF9A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATEDcoord: 208..1367
NoneNo IPR availablePANTHERPTHR34491A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATEDcoord: 208..1367
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 1119..1229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:72678..77114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6669.t1Ggra6669.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 72678..77114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6669.t1 ID=Ggra6669.t1|Name=Ggra6669.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1479bp
MAAVVPSRARTHARPPPDSTHVLRMTLTLQRIIGDVSPHPQLYFFKWMRA
GKAAKLTAAKSLDTAGSFGEQMALYARVRAAARSISSDDPAEPLDTALVL
LTPPRDPNDPPAIVSEVPFDMAYYILKVAASANKSITTTIHMPASIALTL
TIAVKEIGDKFLHLFADMVPQSPKALQSPPTTNTSSSSTDMDEADAALAL
ERLRQDVRDKQRRLDNLEQSADSLHQSLHAADSLSADVSALQQRVRTLEE
QYVQCEGEKLQAERRVAAHVAHAAKIRTTYNQLAEWYNSLRQEHAELQTK
FANSQSQSESTATEDQSTLSARSTDDANATLLQQERDQLKDSLQREREEK
DQINSRNSQLLESKARTLAELREQWDAAKNDYEKTRQRSAENAKALSDLQ
HSIDSLKQQLEDKESLLAEKQTALSRAEALIQEKEAEHQAALISARSEAS
TAEKTSLEAQLQDLKRLHAQQLETAIAEKQQAYDATLSEQLSKKDSEQKE
QVEAERAKLGEELENKRKAEIDAIVAEYERKEKEKSSALESRIHELEEEL
KVSNGGREHSEERAVTLESELRVLREEHEALKVSSESYATESKEMHKKEL
EDVILEKEKLSHEIENLRQESSHATEKLRSEANVSAQRTTEIATECERLR
RELDVLQTQNEEMRKSPREVKSEHAVSDTEQMAANLNIQIAELEKMLRTE
TEKRNEVTNLLSNADREHDELREMVKRLRHERDVAVADLKGAKEAVPTTE
VRNPVIQRSLSRGSQEQEHNIVEERDAAIRELFRVRKGLNKEIRKMKKEK
EELVQKLENGPSEEASAALQSQLSASESQREEVEGELEAVKREIEDVKKL
LHAEREAAAVEIDKLNALRETLKSREEELAVLTSKTEGLEASLSTNEERS
RMKVQQLESEKEEFQKQLQAARSTQASLEAELRSKQEACSELASELETCK
KSVEELSSRQEQASRERDSARHKSSALETELESLKQSLSAVSSSTSSTES
LLREAQKELAEHKAESNLLQCEVDDLKKAADVKSSAHQAELEALRKELAD
AETRISDRDEQLNELTRQVKAQLAALESEKVGRESETSAKKKVEEMVEVL
TRENGSLTEKVSVESGARISAEKRVSEVESEIRGLRQKVSELESVEKAHS
SEGRQMSDEKRALQARVEQVSTQLAGVQKSVSESRSELEDTRQRLQESES
ARAQLIGESKGLKARMAASEASVDELRRALNDTRGQLSEVEEAKRSTEAN
KSWMVRQLSQERDELEDEKRSLQSELEGISGEVTHLKKLNSRLLSTEDAA
ELMGSRDRAVSECASLTRANDALQHSLSKAREQSEAVKSERSAAAKQLRG
VRQELERVKAQLQAADEQRDEALHEARRAAADSAQRLRAALAAAEAQREE
ADKLRADNARLGAEARANGGRDDDGRHDDGGGGGGGGDAVLHELINTRVQ
LAYAQEEAVRLRNKLTKMSAASRSFERV*
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