Ggra6663.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6663.t1
Unique NameGgra6663.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length106
Homology
BLAST of Ggra6663.t1 vs. uniprot
Match: R7Q968 (60S ribosomal protein L44 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7Q968_CHOCR)

HSP 1 Score: 194 bits (494), Expect = 1.300e-62
Identity = 95/104 (91.35%), Postives = 98/104 (94.23%), Query Frame = 0
Query:    2 VVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVATY 105
            VVVPKSRKTLCI+  CKKH LHKVTQYKKGKDSLYAQGKRRYD KQ+GFGGQTKPVFHKKAKTTKKIVLRLECT CGFKQQRV+KRCKHFELGDQKKTKG ATY
Sbjct:   13 VVVPKSRKTLCISKECKKHQLHKVTQYKKGKDSLYAQGKRRYDAKQAGFGGQTKPVFHKKAKTTKKIVLRLECTACGFKQQRVLKRCKHFELGDQKKTKGAATY 116          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A1X6P8J5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8J5_PORUM)

HSP 1 Score: 176 bits (446), Expect = 1.920e-55
Identity = 85/105 (80.95%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVATY 105
            MVVVPKSRKT C A  C+KHTLHKVTQYK GK SL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K  + + RCKHFELGDQKKTKGVAT+
Sbjct:    1 MVVVPKSRKTFCPAKECRKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTLCKYKSHKTLARCKHFELGDQKKTKGVATF 105          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A7S0T657 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T657_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 1.110e-54
Identity = 84/105 (80.00%), Postives = 91/105 (86.67%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVATY 105
            MVV+PKSR T C    CKKHTLHKVTQYK GK SL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLRLEC QC +K  +V+KRCKHFELGDQKK+KG A Y
Sbjct:    1 MVVIPKSRNTFCAGKECKKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLECIQCKYKSHKVLKRCKHFELGDQKKSKGGAVY 105          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A5J4Z0F7 (60S ribosomal protein L44 Q n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0F7_PORPP)

HSP 1 Score: 174 bits (442), Expect = 6.520e-54
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVATY 105
            MVV+PK+RKT C    CKKHTLHKV+QYK GK SLYAQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLRLECT C +K   V+KRCKHFELGDQKKTKG A Y
Sbjct:   68 MVVIPKTRKTFCPGKECKKHTLHKVSQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLECTACKYKHHAVLKRCKHFELGDQKKTKGGAVY 172          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A1Y3MWI1 (Uncharacterized protein n=7 Tax=Opisthokonta TaxID=33154 RepID=A0A1Y3MWI1_PIRSE)

HSP 1 Score: 172 bits (436), Expect = 6.620e-54
Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVA 103
            MV +PK+RKT C   +C+KHTLHKVTQYK GK SL+AQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQC +KQQ  IKRCKHFELG +KKTKG A
Sbjct:    1 MVNIPKTRKTFCKGKKCRKHTLHKVTQYKTGKASLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCKYKQQLAIKRCKHFELGGEKKTKGAA 103          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A6A4H067 (60S ribosomal protein L44 n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4H067_9AGAR)

HSP 1 Score: 168 bits (426), Expect = 7.120e-52
Identity = 81/103 (78.64%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVA 103
            MV VPK+R+T C    C+KHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q V+KRCKHFELG +KKTKG A
Sbjct:   38 MVNVPKTRRTYCKGKTCRKHTAHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQMVLKRCKHFELGGEKKTKGAA 140          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A7S0BH82 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BH82_9RHOD)

HSP 1 Score: 167 bits (422), Expect = 8.750e-52
Identity = 85/104 (81.73%), Postives = 91/104 (87.50%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTK-GVA 103
            MV VPKSRKT C A +CKKHTLHKV+QYKKGKDSL+AQGKRRYDRKQ+GFGGQTKPVF KKAKTTKKIVLRLEC  C +K Q  IKRCKHFEL DQKK+K GVA
Sbjct:    1 MVTVPKSRKTFCPAKQCKKHTLHKVSQYKKGKDSLFAQGKRRYDRKQTGFGGQTKPVFKKKAKTTKKIVLRLECNTCKYKSQVTIKRCKHFELSDQKKSKEGVA 104          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A067QC38 (60S ribosomal protein L44 n=5 Tax=Agaricomycetidae TaxID=452333 RepID=A0A067QC38_9AGAM)

HSP 1 Score: 166 bits (419), Expect = 2.590e-51
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVA 103
            MV +PK+R+T C    CKKHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q  +KRCKHFELG +KKTKG A
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQLSLKRCKHFELGGEKKTKGAA 103          
BLAST of Ggra6663.t1 vs. uniprot
Match: 60S ribosomal protein L44 n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449F2F (60S ribosomal protein L44 n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449F2F)

HSP 1 Score: 166 bits (419), Expect = 2.590e-51
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVA 103
            MV +PK+R+T C   +CKKHT HKVTQYKKGKDSL AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLEC  C +K Q  +KRCKHFELG +KKTKG A
Sbjct:    1 MVNIPKTRRTYCAGKKCKKHTAHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVDCKYKMQMSLKRCKHFELGGEKKTKGAA 103          
BLAST of Ggra6663.t1 vs. uniprot
Match: A0A0D0E233 (60S ribosomal protein L44 n=3 Tax=Agaricomycetidae TaxID=452333 RepID=A0A0D0E233_9AGAM)

HSP 1 Score: 166 bits (419), Expect = 3.650e-51
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTKGVA 103
            MV +PK+R+T C    CKKHT HKVTQYKKGKDSL+AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKK+VLRLECT C +K Q  +KRCKHFELG +KKTKG A
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQLSLKRCKHFELGGEKKTKGAA 103          
The following BLAST results are available for this feature:
BLAST of Ggra6663.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q9681.300e-6291.3560S ribosomal protein L44 n=2 Tax=Rhodymeniophycid... [more]
A0A1X6P8J51.920e-5580.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0T6571.110e-5480.00Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z0F76.520e-5480.9560S ribosomal protein L44 Q n=1 Tax=Porphyridium p... [more]
A0A1Y3MWI16.620e-5481.55Uncharacterized protein n=7 Tax=Opisthokonta TaxID... [more]
A0A6A4H0677.120e-5278.6460S ribosomal protein L44 n=1 Tax=Gymnopus androsa... [more]
A0A7S0BH828.750e-5281.73Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A067QC382.590e-5177.6760S ribosomal protein L44 n=5 Tax=Agaricomycetidae... [more]
60S ribosomal protein L44 n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449F2F2.590e-5176.7060S ribosomal protein L44 n=1 Tax=Stereum hirsutum... [more]
A0A0D0E2333.650e-5177.6760S ribosomal protein L44 n=3 Tax=Agaricomycetidae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.80coord: 1..105
e-value: 1.8E-45
score: 155.7
NoneNo IPR availablePANTHERPTHR10369:SF3860S RIBOSOMAL PROTEIN L44-LIKEcoord: 2..103
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 19..94
e-value: 8.5E-35
score: 119.0
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 2..103
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 63..74
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 3..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:59179..59683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6663.t1Ggra6663.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 59179..59683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6663.t1 ID=Ggra6663.t1|Name=Ggra6663.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=106bp
MVVVPKSRKTLCIAARCKKHTLHKVTQYKKGKDSLYAQGKRRYDRKQSGF
GGQTKPVFHKKAKTTKKIVLRLECTQCGFKQQRVIKRCKHFELGDQKKTK
GVATY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd