Ggra6662.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6662.t1
Unique NameGgra6662.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
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BLAST of Ggra6662.t1 vs. uniprot
Match: A0A2V3IX13 (COP9 signalosome complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX13_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 1.740e-22
Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0 
Query:   18 NQNHPQRISSLPDALVALKQHVLPPSLQPDALRASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAW 87
            NQ HP RISS P+AL ALK + LPPSL  D+LRASHDLLART+DAVNTADVTTLHA R+ LHP  + LA+
Sbjct:   10 NQIHPNRISSFPEALQALKAYALPPSLSADSLRASHDLLARTLDAVNTADVTTLHAQRSHLHPAQNLLAY 79
The following BLAST results are available for this feature:
BLAST of Ggra6662.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IX131.740e-2271.43COP9 signalosome complex subunit 3 n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:57658..58120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6662.t1Ggra6662.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 57658..58120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6662.t1 ID=Ggra6662.t1|Name=Ggra6662.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MEPEPSAPAARVAHNHPNQNHPQRISSLPDALVALKQHVLPPSLQPDALR
ASHDLLARTVDAVNTADVTTLHAARAQLHPLHHFLAWCDARLRPAPCMPR
TDGSAPVAMPRDLSSILGIFLAQWR*
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