Ggra6628.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6628.t1
Unique NameGgra6628.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length361
Homology
BLAST of Ggra6628.t1 vs. uniprot
Match: DUF1963 domain-containing protein n=1 Tax=Kitasatospora indigofera TaxID=67307 RepID=UPI00167C94FE (DUF1963 domain-containing protein n=1 Tax=Kitasatospora indigofera TaxID=67307 RepID=UPI00167C94FE)

HSP 1 Score: 58.5 bits (140), Expect = 4.890e-6
Identity = 30/89 (33.71%), Postives = 42/89 (47.19%), Query Frame = 0
Query:    1 MGCSFYWPAKEPWPVCEKTKHS-------------MIPIIQINKADVPELDFEPSTNLFQLFLCSDFS--CRKGMNGDVPCMRIFWRET 74
            +G    WPA EPWP+C  T H              M+P++QI++ DVP+LDF   T+L Q+  C      C        P  R+ WR +
Sbjct:   43 VGGPLLWPADEPWPLCPGTSHPGHWGEPATQGPVPMVPVVQIHRRDVPQLDFPAGTDLLQVLWCPFIVDLC------PAPTPRVLWRSS 125          
BLAST of Ggra6628.t1 vs. uniprot
Match: A0A0F0GHH4 (Uncharacterized protein n=2 Tax=Lentzea TaxID=165301 RepID=A0A0F0GHH4_LENAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.900e-6
Identity = 27/90 (30.00%), Postives = 44/90 (48.89%), Query Frame = 0
Query:    1 MGCSFYWPAKEPWPVCEKTKH----------------SMIPIIQINKADVPELDFEPSTNLFQLFLCSDFSCRKGMNGDVPCMRIFWRET 74
            +G    WPA EPWP C+ +KH                +++  +Q+ + D PEL F   T+L Q+ LC      +  +   PC+++FWR +
Sbjct:   25 IGGPLLWPADEPWPWCDGSKHDEGLTILPADSFGVPVALVSAVQLYRRDFPELPFPDGTDLLQVLLCPLEHSDEESDHFGPCVQLFWRSS 114          
BLAST of Ggra6628.t1 vs. uniprot
Match: A0A1H2D7J5 (Uncharacterized protein YwqG n=1 Tax=Streptomyces sp. TLI_053 TaxID=1855352 RepID=A0A1H2D7J5_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 8.790e-6
Identity = 24/64 (37.50%), Postives = 35/64 (54.69%), Query Frame = 0
Query:    1 MGCSFYWPAKEPWPVCEKTKHS-------------MIPIIQINKADVPELDFEPSTNLFQLFLC 51
            +G    WPA EPWP+C  T H              ++P++QI++ DVP+LDF   T+L Q+  C
Sbjct:   43 VGGPLLWPADEPWPICPSTDHPGEWGQPGTQGPVPLVPVVQIHRRDVPQLDFPAGTDLLQVLWC 106          
The following BLAST results are available for this feature:
BLAST of Ggra6628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
DUF1963 domain-containing protein n=1 Tax=Kitasatospora indigofera TaxID=67307 RepID=UPI00167C94FE4.890e-633.71DUF1963 domain-containing protein n=1 Tax=Kitasato... [more]
A0A0F0GHH45.900e-630.00Uncharacterized protein n=2 Tax=Lentzea TaxID=1653... [more]
A0A1H2D7J58.790e-637.50Uncharacterized protein YwqG n=1 Tax=Streptomyces ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.320.10coord: 1..183
e-value: 1.9E-8
score: 36.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..191
IPR035948YwqG-like superfamilySUPERFAMILY103032Hypothetical protein YwqGcoord: 6..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000859_piloncontigtig00000859_pilon:225336..226418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6628.t1Ggra6628.t1Gracilaria gracilis GNS1m malemRNAtig00000859_pilon 225336..226418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6628.t1 ID=Ggra6628.t1|Name=Ggra6628.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=361bp
MGCSFYWPAKEPWPVCEKTKHSMIPIIQINKADVPELDFEPSTNLFQLFL
CSDFSCRKGMNGDVPCMRIFWRETCTLHGAILTPEQLRDKKLQTGTDLQE
YKLFPERHQDINSLYEYGKSTELEVYQKRREIASWILDHCVKGLEELGNC
CETHPEYMHSFQDDDGCSSGNGSFEGQSVQDDMSFNTISDLGFNEGEGGD
IDDNGAQKNTERGKEWLLRACTWRKEDDKSYQSDGESTDQLSDSEDEQDE
ATFSEREENALVLADEPHPGTKIGGYAFLRDCSICSVCSVCNDGMQLMLT
VSDSLVEYRDDDDHGGRWKPMDEDRSDIFVGLREESLDARRLFLFRCKRC
GIMALAKQAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035948YwqG-like_sf